- using R version 4.5.2 Patched (2026-01-31 r89382)
- using platform: aarch64-apple-darwin20
- R was compiled by
Apple clang version 16.0.0 (clang-1600.0.26.6)
GNU Fortran (GCC) 14.2.0
- running under: macOS Ventura 13.7.8
- using session charset: UTF-8
- checking for file ‘MKinfer/DESCRIPTION’ ... OK
- this is package ‘MKinfer’ version ‘1.4’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘MKinfer’ can be installed ... [7s/9s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the package can be unloaded cleanly ... [1s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
- checking loading without being on the library search path ... [1s/1s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [5s/5s] NOTE
perm.t.test.default: no visible global function definition for
‘%notin%’
Undefined global functions or variables:
%notin%
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking R/sysdata.rda ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [4s/4s] ERROR
Running examples in ‘MKinfer-Ex.R’ failed
The error most likely occurred in:
> ### Name: h0plot
> ### Title: Visualize Distribution of Test Statistic.
> ### Aliases: h0plot h0plot.default h0plot.htest h0plot.perm.htest
> ### h0plot.boot.htest
> ### Keywords: hplot
>
> ### ** Examples
>
> ## Welch t-Test
> h0plot(t.test(extra ~ group, data = sleep))
> h0plot(t.test(extra ~ group, data = sleep, alternative = "less"))
>
> ## Hsu t-Test
> h0plot(hsu.t.test(extra ~ group, data = sleep))
> h0plot(hsu.t.test(extra ~ group, data = sleep, alternative = "less"))
>
> ## Welch 1-Way ANOVA
> h0plot(oneway.test(extra ~ group, data = sleep))
>
> ## F test to compare two variances
> h0plot(var.test(extra ~ group, data = sleep))
>
> ## Bootstrap based Welch t-Test
> h0plot(boot.t.test(extra ~ group, data = sleep, bootStat = TRUE))
`stat_bin()` using `bins = 30`. Pick better value `binwidth`.
> h0plot(boot.t.test(extra ~ group, data = sleep, bootStat = TRUE,
+ alternative = "less"))
`stat_bin()` using `bins = 30`. Pick better value `binwidth`.
>
> ## Permutation based Welch t-Test
> h0plot(perm.t.test(extra ~ group, data = sleep, permStat = TRUE))
Error in conf.type %notin% c("pivot", "exact", "stud", "perc", "all") :
could not find function "%notin%"
Calls: h0plot ... perm.t.test.formula -> do.call -> perm.t.test -> perm.t.test.default
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [18s/18s] ERROR
Error(s) in re-building vignettes:
--- re-building ‘MKinfer.Rmd’ using rmarkdown
2026-09-30 15:02:09.835 R[71852:448541] XType: Using static font registry.
Quitting from MKinfer.Rmd:337-349 [unnamed-chunk-18]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `conf.type %notin% c("pivot", "exact", "stud", "perc", "all")`:
! could not find function "%notin%"
---
Backtrace:
▆
1. ├─MKinfer::perm.t.test(1:10, y = c(7:20), conf.type = "all")
2. └─MKinfer:::perm.t.test.default(1:10, y = c(7:20), conf.type = "all")
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'MKinfer.Rmd' failed with diagnostics:
could not find function "%notin%"
--- failed re-building ‘MKinfer.Rmd’
SUMMARY: processing the following file failed:
‘MKinfer.Rmd’
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... [6s/5s] OK
- DONE
Status: 2 ERRORs, 1 NOTE