• using R version 4.4.1 (2024-06-14)
• using platform: aarch64-apple-darwin20
• R was compiled by     Apple clang version 14.0.0 (clang-1400.0.29.202)     GNU Fortran (GCC) 12.2.0
• running under: macOS Ventura 13.4
• using session charset: UTF-8
• checking for file ‘ENMTools/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘ENMTools’ version ‘1.1.2’
• package encoding: UTF-8
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• checking package dependencies ... OK
• checking if this is a source package ... OK
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• checking whether package ‘ENMTools’ can be installed ... [18s/20s] OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
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• checking dependencies in R code ... OK
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• checking for unstated dependencies in examples ... OK
• checking R/sysdata.rda ... OK
• checking examples ... [8s/7s] ERROR Running examples in ‘ENMTools-Ex.R’ failed The error most likely occurred in: > ### Name: enmtools.maxent > ### Title: Takes an emtools.species object with presence and background > ### points, and builds a maxent model > ### Aliases: enmtools.maxent > > ### ** Examples > > if(check.extras("enmtools.maxent")) { + ## maxent is not working on some platforms so use try() + try(enmtools.maxent(iberolacerta.clade$species$monticola, env = euro.worldclim)) + }  *** caught illegal operation *** address 0x10b2bef78, cause 'illegal trap' Traceback:  1: rJava::.jcall(mxe, "S", "fit", c("autorun", "-e", afn, "-o", dirout, "-s", pfn, args))  2: .local(x, p, ...)  3: maxent(x, p, ...)  4: maxent(x, p, ...)  5: .local(x, p, ...)  6: dismo::maxent(raster::stack(env), p = analysis.df[analysis.df$presence == 1, 1:2], a = analysis.df[analysis.df$presence == 0, 1:2], ...)  7: dismo::maxent(raster::stack(env), p = analysis.df[analysis.df$presence == 1, 1:2], a = analysis.df[analysis.df$presence == 0, 1:2], ...)  8: withVisible(...elt(i))  9: capture.output(this.mx <- dismo::maxent(raster::stack(env), p = analysis.df[analysis.df$presence == 1, 1:2], a = analysis.df[analysis.df$presence == 0, 1:2], ...)) 10: enmtools.maxent(iberolacerta.clade$species$monticola, env = euro.worldclim) 11: doTryCatch(return(expr), name, parentenv, handler) 12: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 13: tryCatchList(expr, classes, parentenv, handlers) 14: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))}) 15: try(enmtools.maxent(iberolacerta.clade$species$monticola, env = euro.worldclim)) An irrecoverable exception occurred. R is aborting now ...
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [24s/24s] OK   Running ‘testthat.R’ [24s/24s]
• checking PDF version of manual ... [3s/3s] OK
• DONE Status: 1 ERROR
• using check arguments '--no-clean-on-error '