* using log directory ‘/Volumes/Builds/packages/big-sur-arm64/results/4.5/AutoMLR.Rcheck’
* using R version 4.5.2 Patched (2026-01-31 r89382)
* using platform: aarch64-apple-darwin20
* R was compiled by
    Apple clang version 16.0.0 (clang-1600.0.26.6)
    GNU Fortran (GCC) 14.2.0
* running under: macOS Ventura 13.7.8
* using session charset: UTF-8
* checking for file ‘AutoMLR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘AutoMLR’ version ‘1.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘AutoMLR’ can be installed ... [4s/4s] OK
See 'https://www.r-project.org/nosvn/R.check/r-oldrel-macos-arm64/AutoMLR-00install.html' for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s/0s] OK
* checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the package can be unloaded cleanly ... [0s/0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
* checking loading without being on the library search path ... [0s/0s] OK
* checking whether startup messages can be suppressed ... [0s/0s] OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [6s/6s] OK
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... NONE
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [34s/34s] ERROR
  Running ‘testthat.R’ [33s/34s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(AutoMLR)
  AutoMLR loaded (1.0.0). Call initialize_auto_logging() to enable file logging, start_parallel() to enable parallel execution.
  > 
  > test_check("AutoMLR")
  2026-09-17 20:28:33.884 R[12492:170266] XType: Using static font registry.
  Saving _problems/test-survival-workflow-275.R
  [ FAIL 1 | WARN 3269 | SKIP 1 | PASS 372 ]
  
  ══ Skipped tests (1) ═══════════════════════════════════════════════════════════
  • {plsRcox} cannot be loaded (1): 'test-survival-workflow.R:52:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-survival-workflow.R:274:5'): fit_surv_ensemble auto-uses automlr_input cohorts for stability ──
  Expected `file.exists(file.path(export_dir, "figures", "publication", "fig4_multi_cohort_time_roc_panel.png"))` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  
  [ FAIL 1 | WARN 3269 | SKIP 1 | PASS 372 ]
  Error:
  ! Test failures.
  Execution halted
* checking PDF version of manual ... [3s/3s] OK
* DONE
Status: 1 ERROR
* using check arguments '--no-clean-on-error '

* elapsed time (check, wall clock): 1:21