• using R version 4.5.2 Patched (2026-01-31 r89382)
• using platform: aarch64-apple-darwin20
• R was compiled by     Apple clang version 16.0.0 (clang-1600.0.26.6)     GNU Fortran (GCC) 14.2.0
• running under: macOS Ventura 13.7.8
• using session charset: UTF-8
• checking for file ‘AutoMLR/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘AutoMLR’ version ‘1.0.0’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘AutoMLR’ can be installed ... [4s/5s] OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking whether startup messages can be suppressed ... [0s/0s] OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [5s/5s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking examples ... NONE
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [32s/32s] ERROR   Running ‘testthat.R’ [32s/32s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > library(testthat)   > library(AutoMLR)   AutoMLR loaded (1.0.0). Call initialize_auto_logging() to enable file logging, start_parallel() to enable parallel execution.   >   > test_check("AutoMLR")   2026-06-08 20:15:51.363 R[12987:165003] XType: Using static font registry.   Saving _problems/test-survival-workflow-275.R   [ FAIL 1 | WARN 3269 | SKIP 1 | PASS 372 ]      ══ Skipped tests (1) ═══════════════════════════════════════════════════════════   • {plsRcox} cannot be loaded (1): 'test-survival-workflow.R:52:3'      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Failure ('test-survival-workflow.R:274:5'): fit_surv_ensemble auto-uses automlr_input cohorts for stability ──   Expected `file.exists(file.path(export_dir, "figures", "publication", "fig4_multi_cohort_time_roc_panel.png"))` to be TRUE.   Differences:   `actual`: FALSE   `expected`: TRUE         [ FAIL 1 | WARN 3269 | SKIP 1 | PASS 372 ]   Error:   ! Test failures.   Execution halted
• checking PDF version of manual ... [3s/3s] OK
• DONE Status: 1 ERROR
• using check arguments '--no-clean-on-error '