• using R Under development (unstable) (2026-07-18 r90277 ucrt)
• using platform: x86_64-w64-mingw32
• R was compiled by     gcc.exe (GCC) 14.3.0     GNU Fortran (GCC) 14.3.0
• running under: Windows Server 2022 x64 (build 20348)
• using session charset: UTF-8 * current time: 2026-07-19 15:03:24 UTC
• checking for file 'simr/DESCRIPTION' ... OK
• checking extension type ... Package
• this is package 'simr' version '1.0.9'
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking whether package 'simr' can be installed ... OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking 'build' directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [3s] OK
• checking whether the package can be loaded with stated dependencies ... [3s] OK
• checking whether the package can be unloaded cleanly ... [3s] OK
• checking whether the namespace can be loaded with stated dependencies ... [3s] OK
• checking whether the namespace can be unloaded cleanly ... [3s] OK
• checking loading without being on the library search path ... [3s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [10s] NOTE Found calls to structure() using deprecated special names:   simr/tests/testthat/test_powerSim.R (.Dim: 1, .Dimnames: 1) '.Dim' should be changed to 'dim'. '.Dimnames' should be changed to 'dimnames'.
• checking Rd files ... [1s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of 'data' directory ... OK
• checking data for non-ASCII characters ... [0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from 'inst/doc' ... OK
• checking files in 'vignettes' ... OK
• checking examples ... [8s] OK
• checking for unstated dependencies in 'tests' ... OK
• checking tests ... [26s] ERROR   Running 'test-all.R' [26s] Running the tests in 'tests/test-all.R' failed. Complete output:   > if(require(testthat)) {   +   + test_check("simr")   + }   Loading required package: testthat   Loading required package: simr   Loading required package: lme4   Loading required package: Matrix      Attaching package: 'simr'      The following object is masked from 'package:lme4':          getData      The following object is masked from 'package:testthat':          compare      Saving _problems/test_new-39.R   [ FAIL 1 | WARN 1 | SKIP 0 | PASS 115 ]      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test_new.R:39:5'): makeGlmer works ──────────────────────────────────   Error in `mkMerMod(rho, opt, glmod$reTrms, fr = glmod$fr, mc = mcout, lme4conv = cc)`: unexpected parameter vector length: length(pars)=3, npar=3, nAGQ=1; (expected length(pars)==npar iff nAGQ==0)   Backtrace:       ▆    1. └─simr::makeGlmer(...) at test_new.R:39:5    2. └─simr:::makeMer(formula, family, fixef, VarCorr, , data, deparse(substitute(data)))    3. ├─base::suppressWarnings(...)    4. │ └─base::withCallingHandlers(...)    5. └─lme4::glmer(formula, family = family, data = data, control = glmerSet(theta))    6. └─lme4::mkMerMod(...)      [ FAIL 1 | WARN 1 | SKIP 0 | PASS 115 ]   Error:   ! Test failures.   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [24s] ERROR Error(s) in re-building vignettes: --- re-building 'examples.Rmd' using rmarkdown --- finished re-building 'examples.Rmd' --- re-building 'fromscratch.Rmd' using rmarkdown Quitting from fromscratch.Rmd:44-49 [unnamed-chunk-4] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `mkMerMod()`: ! unexpected parameter vector length: length(pars)=3, npar=3, nAGQ=1; (expected length(pars)==npar iff nAGQ==0) --- Backtrace:     ▆  1. └─simr::makeGlmer(...)  2. └─simr:::makeMer(formula, family, fixef, VarCorr, , data, deparse(substitute(data)))  3. ├─base::suppressWarnings(...)  4. │ └─base::withCallingHandlers(...)  5. └─lme4::glmer(formula, family = family, data = data, control = glmerSet(theta))  6. └─lme4::mkMerMod(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'fromscratch.Rmd' failed with diagnostics: unexpected parameter vector length: length(pars)=3, npar=3, nAGQ=1; (expected length(pars)==npar iff nAGQ==0) --- failed re-building 'fromscratch.Rmd' SUMMARY: processing the following file failed:   'fromscratch.Rmd' Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [19s] OK
• checking HTML version of manual ... [1s] OK
• DONE

Status: 2 ERRORs, 1 NOTE