* installing *source* package 'signalHsmm' ...
** this is package 'signalHsmm' version '1.5'
** package 'signalHsmm' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 14.3.0'
make[1]: Entering directory '/d/temp/2026_07_29_01_50_00_30317/RtmpK0u4nC/R.INSTALL1359c632b1d18/signalHsmm/src'
g++ -std=gnu++20  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.7/Rcpp/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.7/Rcpp/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c duration_viterbi.cpp -o duration_viterbi.o
duration_viterbi.cpp: In function 'Rcpp::List duration_viterbi(Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::NumericMatrix)':
duration_viterbi.cpp:50:26: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
   50 |   for(unsigned int j=0; j<nstates; j++) {
      |                         ~^~~~~~~~
g++ -std=gnu++20 -shared -s -static-libgcc -o signalHsmm.dll tmp.def RcppExports.o duration_viterbi.o -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2026_07_29_01_50_00_30317/RtmpK0u4nC/R.INSTALL1359c632b1d18/signalHsmm/src'
make[1]: Entering directory '/d/temp/2026_07_29_01_50_00_30317/RtmpK0u4nC/R.INSTALL1359c632b1d18/signalHsmm/src'
make[1]: Leaving directory '/d/temp/2026_07_29_01_50_00_30317/RtmpK0u4nC/R.INSTALL1359c632b1d18/signalHsmm/src'
installing to d:/Rcompile/CRANpkg/lib/4.7/00LOCK-signalHsmm/00new/signalHsmm/libs/x64
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning in structure(list(`1` = c("R", "N", "D", "Q", "E", "H", "K"), `2` = c("G",  :
  Replacing special names '.Names' is deprecated; use 'names' instead.
Warning in structure(c(0, 0, 0, 0, 1, 0, 0, 0, 0, 1, 0, 0, 0, 0, 1, 0),  :
  Replacing special names '.Dim' is deprecated; use 'dim' instead.
Warning in structure(c(0.282182230869001, 0.0128884115403133, 0.20406633561323,  :
  Replacing special names '.Dim' is deprecated; use 'dim' instead.
Warning in structure(c(-1.11328712008703, -1.1685797676654, -1.34674657905895,  :
  Replacing special names '.Names' is deprecated; use 'names' instead.
Warning in structure(c(0.0946771378708551, 0.18804537521815, 0.191972076788831,  :
  Replacing special names '.Dim', '.Dimnames' is deprecated; use 'dim', 'dimnames' instead.
Warning in structure(list(aa_group = structure(list(`1` = c("R", "N", "D",  :
  Replacing special names '.Names' is deprecated; use 'names' instead.
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'signalHsmm' as signalHsmm_1.5.zip
* DONE (signalHsmm)