- using R Under development (unstable) (2025-09-03 r88788 ucrt)
- using platform: x86_64-w64-mingw32
- R was compiled by
gcc.exe (GCC) 14.2.0
GNU Fortran (GCC) 14.2.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
- checking for file 'reappraised/DESCRIPTION' ... OK
- this is package 'reappraised' version '0.1.1'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'reappraised' can be installed ... OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking 'build' directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [3s] OK
- checking whether the package can be loaded with stated dependencies ... [3s] OK
- checking whether the package can be unloaded cleanly ... [3s] OK
- checking whether the namespace can be loaded with stated dependencies ... [3s] OK
- checking whether the namespace can be unloaded cleanly ... [3s] OK
- checking loading without being on the library search path ... [4s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [16s] OK
- checking Rd files ... [1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of 'data' directory ... OK
- checking data for non-ASCII characters ... [0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from 'inst/doc' ... OK
- checking files in 'vignettes' ... OK
- checking examples ... [6s] OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [4s] ERROR
Error(s) in re-building vignettes:
--- re-building 'reappraised.Rmd' using rmarkdown
Quitting from reappraised.Rmd:88-91 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `ll()`:
! could not find function "ll"
---
Backtrace:
▆
1. ├─reappraised::pval_cont_fn(pval_cont_data, btsp = 500, verbose = FALSE)
2. │ └─z.expand %>% dplyr::group_by(study, var) %>% ...
3. ├─dplyr::group_modify(...)
4. ├─dplyr:::group_modify.grouped_df(...)
5. │ ├─dplyr::group_map(.data, fun, .keep = .keep)
6. │ └─dplyr:::group_map.data.frame(.data, fun, .keep = .keep)
7. │ └─dplyr:::map2(chunks, group_keys, .f, ...)
8. │ └─base::mapply(.f, .x, .y, MoreArgs = list(...), SIMPLIFY = FALSE)
9. │ └─dplyr (local) `<fn>`(dots[[1L]][[1L]], dots[[2L]][[1L]])
10. │ └─reappraised (local) .f(.x, .y, ...)
11. │ ├─broom::glance(lm(y ~ as.factor(grp), data = .))
12. │ └─broom:::glance.lm(lm(y ~ as.factor(grp), data = .))
13. │ ├─base::with(...)
14. │ └─base::with.default(...)
15. │ └─base::eval(substitute(expr), data, enclos = parent.frame())
16. │ └─base::eval(substitute(expr), data, enclos = parent.frame())
17. │ └─tibble::tibble(...)
18. │ └─tibble:::tibble_quos(xs, .rows, .name_repair)
19. │ └─rlang::eval_tidy(xs[[j]], mask)
20. ├─stats::AIC(x)
21. └─stats:::AIC.default(x)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'reappraised.Rmd' failed with diagnostics:
could not find function "ll"
--- failed re-building 'reappraised.Rmd'
SUMMARY: processing the following file failed:
'reappraised.Rmd'
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... [20s] OK
- checking HTML version of manual ... [3s] OK
- DONE
Status: 1 ERROR