• using R Under development (unstable) (2025-11-12 r89009 ucrt)
• using platform: x86_64-w64-mingw32
• R was compiled by     gcc.exe (GCC) 14.3.0     GNU Fortran (GCC) 14.3.0
• running under: Windows Server 2022 x64 (build 20348)
• using session charset: UTF-8
• checking for file 'quincunx/DESCRIPTION' ... OK
• checking extension type ... Package
• this is package 'quincunx' version '0.1.10'
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking whether package 'quincunx' can be installed ... OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s] OK
• checking whether the package can be loaded with stated dependencies ... [1s] OK
• checking whether the package can be unloaded cleanly ... [1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s] OK
• checking loading without being on the library search path ... [1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [7s] OK
• checking Rd files ... [2s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of 'data' directory ... OK
• checking data for non-ASCII characters ... [0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking R/sysdata.rda ... OK
• checking examples ... [2s] ERROR Running examples in 'quincunx-Ex.R' failed The error most likely occurred in: > ### Name: get_cohorts > ### Title: Get PGS Catalog Cohorts > ### Aliases: get_cohorts > > ### ** Examples > > # Get information about specific cohorts by their symbols (acronyms) > get_cohorts(cohort_symbol = c('23andMe', 'IPOBCS')) Error in `purrr::map()`: ℹ In index: 1. Caused by error: ! object 'at_depth' is not exported by 'namespace:purrr' Backtrace:      ▆   1. ├─quincunx::get_cohorts(cohort_symbol = c("23andMe", "IPOBCS"))   2. │ ├─quincunx:::coerce_to_s4_cohorts(...)   3. │ └─quincunx:::get_cohort_by_cohort_symbol(...)   4. │ ├─purrr::pmap(...)   5. │ │ └─purrr:::pmap_("list", .l, .f, ..., .progress = .progress)   6. │ │ └─purrr:::vctrs_list_compat(.l, error_call = .purrr_error_call)   7. │ │ └─purrr:::vctrs_vec_compat(x, user_env)   8. │ └─purrr::map(...)   9. │ └─purrr:::map_("list", .x, .f, ..., .progress = .progress)  10. │ ├─purrr:::with_indexed_errors(...)  11. │ │ └─base::withCallingHandlers(...)  12. │ ├─purrr:::call_with_cleanup(...)  13. │ └─purrr (local) .f(.x[[i]], ...)  14. │ └─quincunx (local) f(...)  15. │ └─quincunx:::get(...)  16. │ └─quincunx:::request_all(...)  17. │ └─quincunx:::is_paginated(obj$json)  18. │ └─quincunx:::count(json_string)  19. ├─base::loadNamespace(x)  20. │ └─base::namespaceImportFrom(...)  21. │ └─base::importIntoEnv(impenv, impnames, ns, impvars)  22. │ └─base::stop(...)  23. └─base::.handleSimpleError(...)  24. └─purrr (local) h(simpleError(msg, call))  25. └─cli::cli_abort(...)  26. └─rlang::abort(...) Execution halted
• checking for unstated dependencies in 'tests' ... OK
• checking tests ... [2s] ERROR   Running 'testthat.R' [2s] Running the tests in 'tests/testthat.R' failed. Complete output:   > library(testthat)   > library(quincunx)   >   > test_check("quincunx")   [ FAIL 5 | WARN 0 | SKIP 0 | PASS 12 ]      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test-count.R:2:3'): normal usage ────────────────────────────────────   Error: object 'at_depth' is not exported by 'namespace:purrr'   Backtrace:       ▆    1. ├─testthat::expect_identical(...) at test-count.R:2:3    2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")    3. │ └─rlang::eval_bare(expr, quo_get_env(quo))    4. ├─quincunx:::count("{\"count\":0,\"next\": \"asdas\"}")    5. └─base::loadNamespace(x)    6. └─base::namespaceImportFrom(...)    7. └─base::importIntoEnv(impenv, impnames, ns, impvars)   ── Error ('test-count.R:7:3'): returns the top level match ─────────────────────   Error: object 'at_depth' is not exported by 'namespace:purrr'   Backtrace:       ▆    1. ├─testthat::expect_identical(...) at test-count.R:7:3    2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")    3. │ └─rlang::eval_bare(expr, quo_get_env(quo))    4. ├─quincunx:::count("{\"count\":42,\"next\":{\"count\":43}}")    5. └─base::loadNamespace(x)    6. └─base::namespaceImportFrom(...)    7. └─base::importIntoEnv(impenv, impnames, ns, impvars)   ── Error ('test-count.R:11:3'): no match returns NA_integer_ ───────────────────   Error: object 'at_depth' is not exported by 'namespace:purrr'   Backtrace:       ▆    1. ├─testthat::expect_true(is.na(count("{\"count\": null}"))) at test-count.R:11:3    2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")    3. │ └─rlang::eval_bare(expr, quo_get_env(quo))    4. ├─quincunx:::count("{\"count\": null}")    5. └─base::loadNamespace(x)    6. └─base::namespaceImportFrom(...)    7. └─base::importIntoEnv(impenv, impnames, ns, impvars)   ── Error ('test-is_paginated.R:3:3'): is not paginated ─────────────────────────   Error: object 'at_depth' is not exported by 'namespace:purrr'   Backtrace:       ▆    1. ├─testthat::expect_false(is_paginated("{\n \"id\": \"PGP000001\"\n }")) at test-is_paginated.R:3:3    2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")    3. │ └─rlang::eval_bare(expr, quo_get_env(quo))    4. ├─quincunx:::is_paginated("{\n \"id\": \"PGP000001\"\n }")    5. │ └─quincunx:::count(json_string)    6. └─base::loadNamespace(x)    7. └─base::namespaceImportFrom(...)    8. └─base::importIntoEnv(impenv, impnames, ns, impvars)   ── Error ('test-is_paginated.R:13:3'): is paginated ────────────────────────────   Error: object 'at_depth' is not exported by 'namespace:purrr'   Backtrace:       ▆    1. ├─testthat::expect_true(is_paginated(txt)) at test-is_paginated.R:13:3    2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")    3. │ └─rlang::eval_bare(expr, quo_get_env(quo))    4. ├─quincunx:::is_paginated(txt)    5. │ └─quincunx:::count(json_string)    6. └─base::loadNamespace(x)    7. └─base::namespaceImportFrom(...)    8. └─base::importIntoEnv(impenv, impnames, ns, impvars)      [ FAIL 5 | WARN 0 | SKIP 0 | PASS 12 ]   Error: Test failures   Execution halted
• checking PDF version of manual ... [22s] OK
• checking HTML version of manual ... [15s] OK
• DONE

Status: 2 ERRORs