* installing *source* package 'pumBayes' ...
** this is package 'pumBayes' version '1.0.0'
** package 'pumBayes' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 14.2.0'
make[1]: Entering directory '/d/temp/2025_10_14_01_50_00_4128/RtmpOSPzih/R.INSTALL18ecc4d692c7b/pumBayes/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppDist/include' -I'D:/RCompile/CRANpkg/lib/4.6/mvtnorm/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppTN/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from RcppExports.cpp:4:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppDist/include' -I'D:/RCompile/CRANpkg/lib/4.6/mvtnorm/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppTN/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c rtn1.cpp -o rtn1.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppDist/include' -I'D:/RCompile/CRANpkg/lib/4.6/mvtnorm/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppTN/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c three_utility_probit_helper_functions.cpp -o three_utility_probit_helper_functions.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from three_utility_probit_helper_functions.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
three_utility_probit_helper_functions.cpp: In function 'Rcpp::List sample_probit_static_rcpp(arma::mat, arma::mat, arma::mat, arma::mat, arma::mat, int, int, int, int, int, double, double, arma::vec, arma::mat, arma::vec, arma::mat, double, int, int, int, double, int, bool)':
three_utility_probit_helper_functions.cpp:571:23: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
571 | if (!is_finite(vote_m(k, j))) {
| ~~~~~~~~~^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:518:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
three_utility_probit_helper_functions.cpp: In function 'Rcpp::List sample_probit_dynamic_rcpp_flip(arma::mat, arma::mat, arma::mat, arma::mat, arma::mat, arma::uvec, arma::uvec, arma::uvec, arma::umat, arma::uvec, int, int, int, int, int, arma::vec, arma::mat, arma::vec, arma::mat, double, double, double, double, int, int, int, double, arma::uvec, arma::uvec, arma::uvec, arma::uvec, bool)':
three_utility_probit_helper_functions.cpp:819:23: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
819 | if (!is_finite(vote_m(j, k))) {
| ~~~~~~~~~^~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
three_utility_probit_helper_functions.cpp: In function 'arma::vec calc_waic_probit_bggum_three_utility(arma::mat, arma::mat, arma::mat, arma::mat, int)':
three_utility_probit_helper_functions.cpp:1115:23: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
1115 | if (!is_finite(case_vote_m(i, j))) {
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
three_utility_probit_helper_functions.cpp: In function 'arma::vec calc_waic_probit_bggum_three_utility_block_rcpp(arma::mat, arma::mat, arma::mat, arma::mat, arma::uvec, arma::mat)':
three_utility_probit_helper_functions.cpp:1163:23: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
1163 | if (!is_finite(case_vote_m(i, j))) {
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
three_utility_probit_helper_functions.cpp: In function 'arma::vec calc_waic_probit_bggum_three_utility_block_vote_rcpp(arma::mat, arma::mat, arma::mat, arma::mat, arma::mat)':
three_utility_probit_helper_functions.cpp:1207:23: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
1207 | if (!is_finite(case_vote_m(i, j))) {
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
three_utility_probit_helper_functions.cpp: In function 'arma::vec calc_waic_cpp(arma::mat, arma::mat, arma::mat, arma::mat, arma::mat, arma::mat)':
three_utility_probit_helper_functions.cpp:1249:23: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
1249 | if (!is_finite(case_vote_m(ind, j))) {
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
three_utility_probit_helper_functions.cpp: In function 'Rcpp::List sample_probit_dynamic_rcpp(arma::mat, arma::mat, arma::mat, arma::mat, arma::mat, arma::uvec, arma::uvec, arma::uvec, arma::umat, arma::uvec, int, int, int, int, int, arma::vec, arma::mat, arma::vec, arma::mat, double, double, double, double, int, int, int, double, arma::uvec, arma::uvec, arma::uvec, arma::uvec, bool)':
three_utility_probit_helper_functions.cpp:1518:23: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
1518 | if (!is_finite(vote_m(j, k))) {
| ~~~~~~~~~^~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
g++ -std=gnu++17 -shared -s -static-libgcc -o pumBayes.dll tmp.def RcppExports.o rtn1.o three_utility_probit_helper_functions.o -LD:/RCompile/recent/R/bin/x64 -lRlapack -LD:/RCompile/recent/R/bin/x64 -lRblas -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2025_10_14_01_50_00_4128/RtmpOSPzih/R.INSTALL18ecc4d692c7b/pumBayes/src'
make[1]: Entering directory '/d/temp/2025_10_14_01_50_00_4128/RtmpOSPzih/R.INSTALL18ecc4d692c7b/pumBayes/src'
make[1]: Leaving directory '/d/temp/2025_10_14_01_50_00_4128/RtmpOSPzih/R.INSTALL18ecc4d692c7b/pumBayes/src'
installing to d:/Rcompile/CRANpkg/lib/4.6/00LOCK-pumBayes/00new/pumBayes/libs/x64
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'pumBayes' as pumBayes_1.0.0.zip
* DONE (pumBayes)