• using R Under development (unstable) (2026-06-09 r90126 ucrt)
• using platform: x86_64-w64-mingw32
• R was compiled by     gcc.exe (GCC) 14.3.0     GNU Fortran (GCC) 14.3.0
• running under: Windows Server 2022 x64 (build 20348)
• using session charset: UTF-8 * current time: 2026-06-10 18:17:57 UTC
• checking for file 'proftools/DESCRIPTION' ... OK
• this is package 'proftools' version '0.99-3'
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking whether package 'proftools' can be installed ... OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking 'build' directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s] OK
• checking whether the package can be unloaded cleanly ... [0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s] OK
• checking loading without being on the library search path ... [0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [8s] OK
• checking Rd files ... [1s] NOTE checkRd: (-1) proftools-package.Rd:40: Lost braces     40 | by the code{kcachegrind} program available on some operating        | ^
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking sizes of PDF files under 'inst/doc' ... OK
• checking installed files from 'inst/doc' ... OK
• checking files in 'vignettes' ... OK
• checking examples ... [11s] ERROR Running examples in 'proftools-Ex.R' failed The error most likely occurred in: > ### Name: rgl-package > ### Title: Tools for examining R profile output > ### Aliases: proftools-package proftools > ### Keywords: programming utilities > > ### ** Examples > > pd <- readProfileData(system.file("samples", "glmEx.out", package="proftools")) > funSummary(pd)                       total.pct self.pct system.time 100 0 sapply 100 0 replicate 100 0 lapply 100 0 FUN 100 4 summary 80 0 glm 76 0 eval 68 0 glm.fit 36 8 paste 28 0 match 28 0 deparse 28 16 %in% 28 4 model.frame.default 24 0 mode 24 4 <Anonymous> 24 0 ifelse 16 12 dev.resids 16 0 data.frame 16 0 force 12 0 as.data.frame.numeric 12 0 as.data.frame 12 0 model.matrix.default 8 0 model.matrix 8 0 getExportedValue 8 0 :: 8 0 .deparseOpts 8 4 .External2 8 4 $ 8 8 unique.default 4 4 unique 4 0 summary.glm 4 0 simplify2array 4 0 names 4 4 na.omit.data.frame 4 0 na.omit 4 0 mu.eta 4 4 length 4 4 is.na 4 4 is.atomic 4 4 getNamespace 4 0 getInternalExportName 4 0 exists 4 4 asNamespace 4 0 as.name 4 4 [[.data.frame 4 0 [[ 4 0 [ 4 4 > callSummary(pd)                                           total.pct self.pct system.time -> replicate 100 0 sapply -> lapply 100 0 replicate -> sapply 100 0 lapply -> FUN 100 4 FUN -> summary 80 0 summary -> glm 76 0 glm -> eval 68 0 eval -> eval 68 0 eval -> glm.fit 36 8 paste -> deparse 28 4 match -> mode 24 4 eval -> <Anonymous> 24 0 deparse -> %in% 24 0 <Anonymous> -> model.frame.default 24 0 %in% -> match 24 0 model.frame.default -> sapply 20 0 mode -> deparse 20 12 glm.fit -> dev.resids 16 0 dev.resids -> ifelse 16 12 FUN -> paste 16 0 FUN -> data.frame 16 0 force -> paste 12 0 data.frame -> as.data.frame 12 0 as.data.frame.numeric -> force 12 0 as.data.frame -> as.data.frame.numeric 12 0 model.matrix -> model.matrix.default 8 0 glm.fit -> $ 8 8 glm -> model.matrix 8 0 eval -> :: 8 0 deparse -> .deparseOpts 8 4 :: -> getExportedValue 8 0 unique -> unique.default 4 4 summary.glm -> [ 4 4 summary -> summary.glm 4 0 simplify2array -> unique 4 0 sapply -> simplify2array 4 0 names -> names 4 4 na.omit.data.frame -> [[ 4 0 na.omit -> na.omit.data.frame 4 0 model.matrix.default -> match 4 0 model.matrix.default -> .External2 4 4 model.frame.default -> .External2 4 0 match -> names 4 0 length -> length 4 4 ifelse -> is.atomic 4 4 glm.fit -> mu.eta 4 4 getNamespace -> as.name 4 4 getInternalExportName -> exists 4 4 getExportedValue -> getInternalExportName 4 0 getExportedValue -> asNamespace 4 0 data.frame -> length 4 0 asNamespace -> getNamespace 4 0 [[.data.frame -> %in% 4 4 [[ -> [[.data.frame 4 0 .deparseOpts -> is.na 4 4 .External2 -> na.omit 4 0 > pathSummary(pd)                                                   total.pct ... eval -> glm.fit -> dev.resids -> ifelse 12 ... deparse -> %in% -> match -> mode -> deparse 12 ... summary -> glm -> eval -> eval -> glm.fit 8 ... glm -> eval -> eval -> glm.fit -> $ 8 ... simplify2array -> unique -> unique.default 4 ... sapply -> lapply -> FUN -> paste -> deparse 4 ... replicate -> sapply -> lapply -> FUN 4 ... paste -> deparse -> %in% -> match -> mode 4 ... model.matrix.default -> .External2 4 ... mode -> deparse -> .deparseOpts -> is.na 4 ... match -> names -> names 4 ... match -> mode -> deparse -> .deparseOpts 4 ... lapply -> FUN -> summary -> summary.glm -> [ 4 ... glm.fit -> dev.resids -> ifelse -> is.atomic 4 ... glm -> eval -> eval -> glm.fit -> mu.eta 4 ... getInternalExportName -> exists 4 ... asNamespace -> getNamespace -> as.name 4 ... [[ -> [[.data.frame -> %in% 4 ... FUN -> data.frame -> length -> length 4 > hotPaths(pd)  path total.pct self.pct  system.time 100 0  . replicate 100 0  . . sapply 100 0  . . . lapply 100 0  . . . . FUN 100 4  . . . . . data.frame 16 0  . . . . . . as.data.frame 12 0  . . . . . . . as.data.frame.numeric 12 0  . . . . . . . . force 12 0  . . . . . . . . . paste 12 12  . . . . . . length 4 0  . . . . . . . length 4 4  . . . . . summary 80 0  . . . . . . glm 76 0  . . . . . . . eval 68 0  . . . . . . . . eval 68 0  . . . . . . . . . :: 8 8  . . . . . . . . . <Anonymous> 24 24  . . . . . . . . . glm.fit 36 36  . . . . . . . model.matrix 8 0  . . . . . . . . model.matrix.default 8 0  . . . . . . . . . .External2 4 4  . . . . . . . . . match 4 4  . . . . . . summary.glm 4 0  . . . . . . . [ 4 4 > plot(pd)
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [42s] OK
• checking PDF version of manual ... [21s] OK
• checking HTML version of manual ... [5s] OK
• DONE

Status: 1 ERROR, 1 NOTE