* installing *source* package 'matrixCorr' ...
** this is package 'matrixCorr' version '0.11.1'
** package 'matrixCorr' successfully unpacked and MD5 sums checked
** using staged installation
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
specified C++17
using C++ compiler: 'g++.exe (GCC) 14.3.0'
using C++17
make[1]: Entering directory '/d/temp/2026_04_21_01_50_00_16195/RtmpiAMD05/R.INSTALL5fe413d02329/matrixCorr/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
In file included from <command-line>:
./matrixCorr_r_api_compat.h:27:13: warning: 'R_UnboundValue' redeclared without dllimport attribute: previous dllimport ignored [-Wattributes]
27 | extern SEXP R_UnboundValue;
| ^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/RcppCommon.h:29,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from RcppExports.cpp:4:
D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp/r/check_r_headers.h:35:21: note: '#pragma message: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410'
35 | #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c biweight_mid_corr.cpp -o biweight_mid_corr.o
In file included from <command-line>:
./matrixCorr_r_api_compat.h:27:13: warning: 'R_UnboundValue' redeclared without dllimport attribute: previous dllimport ignored [-Wattributes]
27 | extern SEXP R_UnboundValue;
| ^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/RcppCommon.h:29,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from biweight_mid_corr.cpp:5:
D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp/r/check_r_headers.h:35:21: note: '#pragma message: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410'
35 | #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c bland_altman.cpp -o bland_altman.o
In file included from <command-line>:
./matrixCorr_r_api_compat.h:27:13: warning: 'R_UnboundValue' redeclared without dllimport attribute: previous dllimport ignored [-Wattributes]
27 | extern SEXP R_UnboundValue;
| ^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/RcppCommon.h:29,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from bland_altman.cpp:2:
D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp/r/check_r_headers.h:35:21: note: '#pragma message: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410'
35 | #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c bland_altman_repeated.cpp -o bland_altman_repeated.o
In file included from <command-line>:
./matrixCorr_r_api_compat.h:27:13: warning: 'R_UnboundValue' redeclared without dllimport attribute: previous dllimport ignored [-Wattributes]
27 | extern SEXP R_UnboundValue;
| ^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/RcppCommon.h:29,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from bland_altman_repeated.cpp:4:
D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp/r/check_r_headers.h:35:21: note: '#pragma message: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410'
35 | #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ccc_repeated.cpp -o ccc_repeated.o
In file included from <command-line>:
./matrixCorr_r_api_compat.h:27:13: warning: 'R_UnboundValue' redeclared without dllimport attribute: previous dllimport ignored [-Wattributes]
27 | extern SEXP R_UnboundValue;
| ^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/RcppCommon.h:29,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ccc_repeated.cpp:2:
D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp/r/check_r_headers.h:35:21: note: '#pragma message: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410'
35 | #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ccc_repeated_helper.cpp -o ccc_repeated_helper.o
In file included from <command-line>:
./matrixCorr_r_api_compat.h:27:13: warning: 'R_UnboundValue' redeclared without dllimport attribute: previous dllimport ignored [-Wattributes]
27 | extern SEXP R_UnboundValue;
| ^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/RcppCommon.h:29,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ccc_repeated_helper.cpp:4:
D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp/r/check_r_headers.h:35:21: note: '#pragma message: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410'
35 | #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ccc_repeated_mixed_model.cpp -o ccc_repeated_mixed_model.o
In file included from <command-line>:
./matrixCorr_r_api_compat.h:27:13: warning: 'R_UnboundValue' redeclared without dllimport attribute: previous dllimport ignored [-Wattributes]
27 | extern SEXP R_UnboundValue;
| ^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/RcppCommon.h:29,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ccc_repeated_mixed_model.cpp:3:
D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp/r/check_r_headers.h:35:21: note: '#pragma message: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410'
35 | #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c concordance_corr.cpp -o concordance_corr.o
In file included from <command-line>:
./matrixCorr_r_api_compat.h:27:13: warning: 'R_UnboundValue' redeclared without dllimport attribute: previous dllimport ignored [-Wattributes]
27 | extern SEXP R_UnboundValue;
| ^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/RcppCommon.h:29,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from concordance_corr.cpp:2:
D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp/r/check_r_headers.h:35:21: note: '#pragma message: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410'
35 | #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c distance_correlation.cpp -o distance_correlation.o
In file included from <command-line>:
./matrixCorr_r_api_compat.h:27:13: warning: 'R_UnboundValue' redeclared without dllimport attribute: previous dllimport ignored [-Wattributes]
27 | extern SEXP R_UnboundValue;
| ^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/RcppCommon.h:29,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from distance_correlation.cpp:5:
D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp/r/check_r_headers.h:35:21: note: '#pragma message: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410'
35 | #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c icc.cpp -o icc.o
In file included from <command-line>:
./matrixCorr_r_api_compat.h:27:13: warning: 'R_UnboundValue' redeclared without dllimport attribute: previous dllimport ignored [-Wattributes]
27 | extern SEXP R_UnboundValue;
| ^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/RcppCommon.h:29,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from icc.cpp:4:
D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp/r/check_r_headers.h:35:21: note: '#pragma message: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410'
35 | #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c kendall_corr.cpp -o kendall_corr.o
In file included from <command-line>:
./matrixCorr_r_api_compat.h:27:13: warning: 'R_UnboundValue' redeclared without dllimport attribute: previous dllimport ignored [-Wattributes]
27 | extern SEXP R_UnboundValue;
| ^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/RcppCommon.h:29,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from kendall_corr.cpp:3:
D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp/r/check_r_headers.h:35:21: note: '#pragma message: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410'
35 | #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c partial_correlation.cpp -o partial_correlation.o
In file included from <command-line>:
./matrixCorr_r_api_compat.h:27:13: warning: 'R_UnboundValue' redeclared without dllimport attribute: previous dllimport ignored [-Wattributes]
27 | extern SEXP R_UnboundValue;
| ^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/RcppCommon.h:29,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from partial_correlation.cpp:4:
D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp/r/check_r_headers.h:35:21: note: '#pragma message: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410'
35 | #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c pearson.cpp -o pearson.o
In file included from <command-line>:
./matrixCorr_r_api_compat.h:27:13: warning: 'R_UnboundValue' redeclared without dllimport attribute: previous dllimport ignored [-Wattributes]
27 | extern SEXP R_UnboundValue;
| ^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/RcppCommon.h:29,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from pearson.cpp:3:
D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp/r/check_r_headers.h:35:21: note: '#pragma message: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410'
35 | #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c rmcorr.cpp -o rmcorr.o
In file included from <command-line>:
./matrixCorr_r_api_compat.h:27:13: warning: 'R_UnboundValue' redeclared without dllimport attribute: previous dllimport ignored [-Wattributes]
27 | extern SEXP R_UnboundValue;
| ^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/RcppCommon.h:29,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from rmcorr.cpp:5:
D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp/r/check_r_headers.h:35:21: note: '#pragma message: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410'
35 | #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c robust_correlations.cpp -o robust_correlations.o
In file included from <command-line>:
./matrixCorr_r_api_compat.h:27:13: warning: 'R_UnboundValue' redeclared without dllimport attribute: previous dllimport ignored [-Wattributes]
27 | extern SEXP R_UnboundValue;
| ^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/RcppCommon.h:29,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from robust_correlations.cpp:5:
D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp/r/check_r_headers.h:35:21: note: '#pragma message: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410'
35 | #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c schafer_strimmer_shrinkage_correlation.cpp -o schafer_strimmer_shrinkage_correlation.o
In file included from <command-line>:
./matrixCorr_r_api_compat.h:27:13: warning: 'R_UnboundValue' redeclared without dllimport attribute: previous dllimport ignored [-Wattributes]
27 | extern SEXP R_UnboundValue;
| ^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/RcppCommon.h:29,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from schafer_strimmer_shrinkage_correlation.cpp:4:
D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp/r/check_r_headers.h:35:21: note: '#pragma message: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410'
35 | #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c spearman.cpp -o spearman.o
In file included from <command-line>:
./matrixCorr_r_api_compat.h:27:13: warning: 'R_UnboundValue' redeclared without dllimport attribute: previous dllimport ignored [-Wattributes]
27 | extern SEXP R_UnboundValue;
| ^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/RcppCommon.h:29,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from spearman.cpp:2:
D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp/r/check_r_headers.h:35:21: note: '#pragma message: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410'
35 | #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c tetrachoric.cpp -o tetrachoric.o
In file included from <command-line>:
./matrixCorr_r_api_compat.h:27:13: warning: 'R_UnboundValue' redeclared without dllimport attribute: previous dllimport ignored [-Wattributes]
27 | extern SEXP R_UnboundValue;
| ^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/RcppCommon.h:29,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from tetrachoric.cpp:4:
D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp/r/check_r_headers.h:35:21: note: '#pragma message: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410'
35 | #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c validate_corr_input.cpp -o validate_corr_input.o
In file included from <command-line>:
./matrixCorr_r_api_compat.h:27:13: warning: 'R_UnboundValue' redeclared without dllimport attribute: previous dllimport ignored [-Wattributes]
27 | extern SEXP R_UnboundValue;
| ^~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/RcppCommon.h:29,
from D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp.h:27,
from validate_corr_input.cpp:4:
D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/Rcpp/r/check_r_headers.h:35:21: note: '#pragma message: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410'
35 | #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -shared -s -static-libgcc -o matrixCorr.dll tmp.def RcppExports.o biweight_mid_corr.o bland_altman.o bland_altman_repeated.o ccc_repeated.o ccc_repeated_helper.o ccc_repeated_mixed_model.o concordance_corr.o distance_correlation.o icc.o kendall_corr.o partial_correlation.o pearson.o rmcorr.o robust_correlations.o schafer_strimmer_shrinkage_correlation.o spearman.o tetrachoric.o validate_corr_input.o -LD:/RCompile/recent/R/bin/x64 -lRlapack -LD:/RCompile/recent/R/bin/x64 -lRblas -lgfortran -lquadmath -fopenmp -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2026_04_21_01_50_00_16195/RtmpiAMD05/R.INSTALL5fe413d02329/matrixCorr/src'
make[1]: Entering directory '/d/temp/2026_04_21_01_50_00_16195/RtmpiAMD05/R.INSTALL5fe413d02329/matrixCorr/src'
make[1]: Leaving directory '/d/temp/2026_04_21_01_50_00_16195/RtmpiAMD05/R.INSTALL5fe413d02329/matrixCorr/src'
installing to d:/Rcompile/CRANpkg/lib/4.6/00LOCK-matrixCorr/00new/matrixCorr/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'matrixCorr' as matrixCorr_0.11.1.zip
* DONE (matrixCorr)