* installing *source* package 'lvmcomp' ...
** this is package 'lvmcomp' version '1.2'
** package 'lvmcomp' successfully unpacked and MD5 sums checked
** using staged installation
** libs
specified C++11
using C compiler: 'gcc.exe (GCC) 14.3.0'
using C++ compiler: 'g++.exe (GCC) 14.3.0'
make[1]: Entering directory '/d/temp/2025_12_28_01_50_00_8710/RtmpmyYJMz/R.INSTALL62cc4d0d6484/lvmcomp/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c calcu_sigma_cmle.cpp -o calcu_sigma_cmle.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c depend_funcs.cpp -o depend_funcs.o
depend_funcs.cpp: In function 'double deriv_based_ARS(arma::vec, arma::vec, int, arma::vec, arma::mat, arma::mat, arma::vec)':
depend_funcs.cpp:93:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
93 | for(int ii=0;ii<z.n_elem;++ii){
| ~~^~~~~~~~~
depend_funcs.cpp:113:22: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
113 | for(int ii=1;ii<areas.n_elem-1;++ii){
| ~~^~~~~~~~~~~~~~~
depend_funcs.cpp:127:26: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
127 | if(!arma::is_finite(candidate))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:518,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from depend_funcs.cpp:2:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
depend_funcs.cpp:135:28: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
135 | if(!arma::is_finite(candidate))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
depend_funcs.cpp:176:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
176 | for(int ii=0;ii<z.n_elem;++ii){
| ~~^~~~~~~~~
depend_funcs.cpp: In function 'arma::vec F_prime_theta_y_eta_cpp_partial_credit1(arma::vec, arma::vec, int, arma::vec, arma::mat, arma::mat, arma::mat)':
depend_funcs.cpp:194:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
194 | for(int ii=0;ii<x.n_elem;++ii){
| ~~^~~~~~~~~
depend_funcs.cpp: In function 'arma::vec F_theta_y_eta_cpp_partial_credit1(arma::vec, arma::vec, int, arma::vec, arma::mat, arma::mat, arma::mat)':
depend_funcs.cpp:226:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
226 | for(int ii=0;ii<x.n_elem;++ii){
| ~~^~~~~~~~~
depend_funcs.cpp: In function 'double deriv_based_ARS_partial_credit(arma::vec, arma::vec, int, arma::vec, arma::mat, arma::mat, arma::mat)':
depend_funcs.cpp:296:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
296 | for(int ii=0;ii<z.n_elem;++ii){
| ~~^~~~~~~~~
depend_funcs.cpp:327:22: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
327 | for(int ii=1;ii<areas.n_elem-1;++ii){
| ~~^~~~~~~~~~~~~~~
depend_funcs.cpp:345:26: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
345 | if(!arma::is_finite(candidate))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
depend_funcs.cpp:354:28: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
354 | if(!arma::is_finite(candidate))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
depend_funcs.cpp:361:24: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
361 | if(!arma::is_finite(candidate)){
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
depend_funcs.cpp:363:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
363 | for(int ii=0;ii<initial_x.n_elem;++ii){
| ~~^~~~~~~~~~~~~~~~~
depend_funcs.cpp:367:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
367 | for(int ii=0;ii<x.n_elem;++ii){
| ~~^~~~~~~~~
depend_funcs.cpp:371:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
371 | for(int ii=0;ii<log_fn.n_elem;++ii){
| ~~^~~~~~~~~~~~~~
depend_funcs.cpp:375:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
375 | for(int ii=0;ii<s_a.n_elem;++ii){
| ~~^~~~~~~~~~~
depend_funcs.cpp:379:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
379 | for(int ii=0;ii<z.n_elem;++ii){
| ~~^~~~~~~~~
depend_funcs.cpp:383:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
383 | for(int ii=0;ii<areas.n_elem;++ii){
| ~~^~~~~~~~~~~~~
depend_funcs.cpp:437:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
437 | for(int ii=0;ii<z.n_elem;++ii){
| ~~^~~~~~~~~
gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -std=gnu2x -mfpmath=sse -msse2 -mstackrealign -c lbfgs.c -o lbfgs.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c my_Logistic.cpp -o my_Logistic.o
my_Logistic.cpp: In function 'arma::vec my_Logistic_cpp(arma::mat, arma::vec, arma::vec, double)':
my_Logistic.cpp:150:10: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
150 | double ret = 0;
| ^~~
my_Logistic.cpp: In function 'arma::vec my_Logistic_cpp_partial(arma::mat, arma::vec, arma::vec, arma::vec)':
my_Logistic.cpp:197:10: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
197 | double ret = 0;
| ^~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c stem_mirt.cpp -o stem_mirt.o
g++ -std=gnu++17 -shared -s -static-libgcc -o lvmcomp.dll tmp.def RcppExports.o calcu_sigma_cmle.o depend_funcs.o lbfgs.o my_Logistic.o stem_mirt.o -LD:/RCompile/recent/R/bin/x64 -lRlapack -LD:/RCompile/recent/R/bin/x64 -lRblas -lgfortran -lquadmath -fopenmp -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2025_12_28_01_50_00_8710/RtmpmyYJMz/R.INSTALL62cc4d0d6484/lvmcomp/src'
make[1]: Entering directory '/d/temp/2025_12_28_01_50_00_8710/RtmpmyYJMz/R.INSTALL62cc4d0d6484/lvmcomp/src'
make[1]: Leaving directory '/d/temp/2025_12_28_01_50_00_8710/RtmpmyYJMz/R.INSTALL62cc4d0d6484/lvmcomp/src'
installing to d:/Rcompile/CRANpkg/lib/4.6/00LOCK-lvmcomp/00new/lvmcomp/libs/x64
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'lvmcomp' as lvmcomp_1.2.zip
* DONE (lvmcomp)