* installing *source* package 'lefko3' ...
** this is package 'lefko3' version '6.7.1'
** package 'lefko3' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 14.3.0'
make[1]: Entering directory '/d/temp/2026_02_05_01_50_00_2357/RtmpoVQmIM/R.INSTALL3698540210/lefko3/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -DARMA_USE_CURRENT -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/BH/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -I../inst/include/ -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c DataManagement.cpp -o DataManagement.o
In file included from ../inst/include/LefkoUtils.h:8,
from DataManagement.cpp:5:
../inst/include/basic_funcs/mat_stuff.h: In function 'Rcpp::DataFrame LefkoMats::supp_reassess(Rcpp::DataFrame, bool, Rcpp::Nullable<Rcpp::DataFrame_Impl<Rcpp::PreserveStorage> >, Rcpp::Nullable<Rcpp::DataFrame_Impl<Rcpp::PreserveStorage> >)':
../inst/include/basic_funcs/mat_stuff.h:1672:12: warning: variable 'esta2_used' set but not used [-Wunused-but-set-variable]
1672 | bool esta2_used {false};
| ^~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -DARMA_USE_CURRENT -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/BH/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -I../inst/include/ -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ErrorChecks.cpp -o ErrorChecks.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -DARMA_USE_CURRENT -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/BH/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -I../inst/include/ -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ExtraFunctions.cpp -o ExtraFunctions.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -DARMA_USE_CURRENT -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/BH/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -I../inst/include/ -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c Mats2.cpp -o Mats2.o
In file included from ../inst/include/LefkoUtils.h:8,
from Mats2.cpp:3:
../inst/include/basic_funcs/mat_stuff.h: In function 'Rcpp::DataFrame LefkoMats::supp_reassess(Rcpp::DataFrame, bool, Rcpp::Nullable<Rcpp::DataFrame_Impl<Rcpp::PreserveStorage> >, Rcpp::Nullable<Rcpp::DataFrame_Impl<Rcpp::PreserveStorage> >)':
../inst/include/basic_funcs/mat_stuff.h:1672:12: warning: variable 'esta2_used' set but not used [-Wunused-but-set-variable]
1672 | bool esta2_used {false};
| ^~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -DARMA_USE_CURRENT -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/BH/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -I../inst/include/ -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c MatsNProj.cpp -o MatsNProj.o
In file included from ../inst/include/LefkoUtils.h:8,
from MatsNProj.cpp:7:
../inst/include/basic_funcs/mat_stuff.h: In function 'Rcpp::DataFrame LefkoMats::supp_reassess(Rcpp::DataFrame, bool, Rcpp::Nullable<Rcpp::DataFrame_Impl<Rcpp::PreserveStorage> >, Rcpp::Nullable<Rcpp::DataFrame_Impl<Rcpp::PreserveStorage> >)':
../inst/include/basic_funcs/mat_stuff.h:1672:12: warning: variable 'esta2_used' set but not used [-Wunused-but-set-variable]
1672 | bool esta2_used {false};
| ^~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -DARMA_USE_CURRENT -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/BH/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -I../inst/include/ -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ModelSelection.cpp -o ModelSelection.o
In file included from ../inst/include/LefkoUtils.h:8,
from ModelSelection.cpp:2:
../inst/include/basic_funcs/mat_stuff.h: In function 'Rcpp::DataFrame LefkoMats::supp_reassess(Rcpp::DataFrame, bool, Rcpp::Nullable<Rcpp::DataFrame_Impl<Rcpp::PreserveStorage> >, Rcpp::Nullable<Rcpp::DataFrame_Impl<Rcpp::PreserveStorage> >)':
../inst/include/basic_funcs/mat_stuff.h:1672:12: warning: variable 'esta2_used' set but not used [-Wunused-but-set-variable]
1672 | bool esta2_used {false};
| ^~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -DARMA_USE_CURRENT -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/BH/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -I../inst/include/ -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c PopChar.cpp -o PopChar.o
In file included from ../inst/include/LefkoUtils.h:8,
from PopChar.cpp:3:
../inst/include/basic_funcs/mat_stuff.h: In function 'Rcpp::DataFrame LefkoMats::supp_reassess(Rcpp::DataFrame, bool, Rcpp::Nullable<Rcpp::DataFrame_Impl<Rcpp::PreserveStorage> >, Rcpp::Nullable<Rcpp::DataFrame_Impl<Rcpp::PreserveStorage> >)':
../inst/include/basic_funcs/mat_stuff.h:1672:12: warning: variable 'esta2_used' set but not used [-Wunused-but-set-variable]
1672 | bool esta2_used {false};
| ^~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -DARMA_USE_CURRENT -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/BH/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -I../inst/include/ -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c PopDyn2.cpp -o PopDyn2.o
In file included from ../inst/include/LefkoUtils.h:8,
from PopDyn2.cpp:3:
../inst/include/basic_funcs/mat_stuff.h: In function 'Rcpp::DataFrame LefkoMats::supp_reassess(Rcpp::DataFrame, bool, Rcpp::Nullable<Rcpp::DataFrame_Impl<Rcpp::PreserveStorage> >, Rcpp::Nullable<Rcpp::DataFrame_Impl<Rcpp::PreserveStorage> >)':
../inst/include/basic_funcs/mat_stuff.h:1672:12: warning: variable 'esta2_used' set but not used [-Wunused-but-set-variable]
1672 | bool esta2_used {false};
| ^~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -DARMA_USE_CURRENT -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/BH/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -I../inst/include/ -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -shared -s -static-libgcc -o lefko3.dll tmp.def DataManagement.o ErrorChecks.o ExtraFunctions.o Mats2.o MatsNProj.o ModelSelection.o PopChar.o PopDyn2.o RcppExports.o -fopenmp -LD:/RCompile/recent/R/bin/x64 -lRlapack -LD:/RCompile/recent/R/bin/x64 -lRblas -lgfortran -lquadmath -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2026_02_05_01_50_00_2357/RtmpoVQmIM/R.INSTALL3698540210/lefko3/src'
make[1]: Entering directory '/d/temp/2026_02_05_01_50_00_2357/RtmpoVQmIM/R.INSTALL3698540210/lefko3/src'
make[1]: Leaving directory '/d/temp/2026_02_05_01_50_00_2357/RtmpoVQmIM/R.INSTALL3698540210/lefko3/src'
installing to d:/Rcompile/CRANpkg/lib/4.6/00LOCK-lefko3/00new/lefko3/libs/x64
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'lefko3' as lefko3_6.7.1.zip
* DONE (lefko3)