• using R Under development (unstable) (2025-09-03 r88788 ucrt)
• using platform: x86_64-w64-mingw32
• R was compiled by     gcc.exe (GCC) 14.2.0     GNU Fortran (GCC) 14.2.0
• running under: Windows Server 2022 x64 (build 20348)
• using session charset: UTF-8
• checking for file 'iCAMP/DESCRIPTION' ... OK
• checking extension type ... Package
• this is package 'iCAMP' version '1.5.12'
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking whether package 'iCAMP' can be installed ... OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s] OK
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• checking whether the package can be unloaded cleanly ... [2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s] OK
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• checking loading without being on the library search path ... [2s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
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• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [29s] OK
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• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
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• checking for unstated dependencies in examples ... OK
• checking contents of 'data' directory ... OK
• checking data for non-ASCII characters ... [0s] OK
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• checking examples ... [52s] ERROR Running examples in 'iCAMP-Ex.R' failed The error most likely occurred in: > ### Name: snm > ### Title: Estimation of neutral taxa percentae and dispersal rate > ### Aliases: snm snm.boot snm.comm > ### Keywords: Other method > > ### ** Examples > > data("example.data") > comm=example.data$comm > treat=example.data$treat > rand.time=10 # usually use 1000 for real data. > snmtest=snm.comm(comm = comm, treat = treat, + rand = rand.time) All match very well. All match very well. Loading required namespace: minpack.lm Loading required namespace: Hmisc Loading required namespace: stats4 All match very well. Waiting for profiling to be done... Warning in stats::dnorm(R, 0, sigma) : NaNs produced Warning in stats::dnorm(R, 0, sigma) : NaNs produced Warning in stats::dnorm(R, 0, sigma) : NaNs produced Warning in stats::pbeta(d, N * m * p, N * m * (1 - p), lower.tail = FALSE) :   NaNs produced Warning in stats::pbeta(d, N * m * p, N * m * (1 - p), lower.tail = FALSE) :   NaNs produced Warning in stats::pbeta(d, N * m * p, N * m * (1 - p), lower.tail = FALSE) :   NaNs produced Warning in stats::dnorm(R, 0, sigma) : NaNs produced Warning in stats::pbeta(d, N * m * p, N * m * (1 - p), lower.tail = FALSE) :   NaNs produced Warning in stats::pbeta(d, N * m * p, N * m * (1 - p), lower.tail = FALSE) :   NaNs produced Warning in stats::pbeta(d, N * m * p, N * m * (1 - p), lower.tail = FALSE) :   NaNs produced Warning in stats::pbeta(d, N * m * p, N * m * (1 - p), lower.tail = FALSE) :   NaNs produced Error in UseMethod("logLik") :   no applicable method for 'logLik' applied to an object of class "mle" Calls: snm.comm ... <Anonymous> -> <Anonymous> -> <Anonymous> -> AIC.default -> ll Execution halted
• checking PDF version of manual ... [25s] OK
• checking HTML version of manual ... [12s] OK
• DONE

Status: 1 ERROR