* using log directory 'd:/Rcompile/CRANpkg/local/4.6/grex.Rcheck' * using R Under development (unstable) (2025-07-14 r88410 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.2.0 GNU Fortran (GCC) 14.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'grex/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'grex' version '1.9' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'grex' can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-devel-windows-x86_64/grex-00install.html' for details. * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s] OK * checking whether the package can be loaded with stated dependencies ... [0s] OK * checking whether the package can be unloaded cleanly ... [0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s] OK * checking whether the namespace can be unloaded cleanly ... [0s] OK * checking loading without being on the library search path ... [0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [2s] OK * checking Rd files ... [0s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [1s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [2s] OK * checking PDF version of manual ... Check process probably crashed or hung up for 20 minutes ... killed Most likely this happened in the example checks (?), if not, ignore the following last lines of example output: 84 ENSG00000207776 693135 miRNA 86 ENSG00000158109 127262 protein_coding 87 ENSG00000116213 49856 protein_coding 88 ENSG00000078900 7161 protein_coding 91 ENSG00000227372 57212 transcribed_unitary_pseudogene 92 ENSG00000162592 148870 protein_coding 93 ENSG00000235169 388588 protein_coding 94 ENSG00000130764 57470 protein_coding 97 ENSG00000116198 9731 protein_coding 98 ENSG00000169598 1677 protein_coding 99 ENSG00000198912 339448 protein_coding 100 ENSG00000236423 100133612 lincRNA > > > > ### *