* installing *source* package 'glyrepr' ...
** this is package 'glyrepr' version '1.2.0'
** package 'glyrepr' successfully unpacked and MD5 sums checked
** using staged installation
** libs
specified C++17
using C++ compiler: 'g++.exe (GCC) 14.3.0'
using C++17
make[1]: Entering directory '/d/temp/2026_11_08_01_50_00_17898/RtmpuuckFW/R.INSTALL11b21435857ca2/glyrepr/src'
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.7/Rcpp/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c RcppExports.cpp -o RcppExports.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.7/Rcpp/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c array-validation.cpp -o array-validation.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.7/Rcpp/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c compact-arrays.cpp -o compact-arrays.o
compact-arrays.cpp:189:51: warning: trigraph ??- ignored, use -trigraphs to enable [-Wtrigraphs]
  189 |     for (int node : f.edge_order) t.link[node] = "??-?";
compact-arrays.cpp:191:48: warning: trigraph ??- ignored, use -trigraphs to enable [-Wtrigraphs]
  191 |     for (auto& part : f.parts) part.linkage = "??-?";
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.7/Rcpp/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c compact-igraph.cpp -o compact-igraph.o
compact-igraph.cpp: In function 'bool {anonymous}::plain(SEXP, SEXPTYPE, R_xlen_t)':
compact-igraph.cpp:91:20: warning: comparison of integer expressions of different signedness: 'int' and 'SEXPTYPE' {aka 'unsigned int'} [-Wsign-compare]
   91 |   return TYPEOF(x) == type && Rf_xlength(x) == size && no_attributes(x);
      |          ~~~~~~~~~~^~~~~~~
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.7/Rcpp/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c compact-iupac.cpp -o compact-iupac.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.7/Rcpp/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c graph-counts.cpp -o graph-counts.o
g++ -shared -s -static-libgcc -o glyrepr.dll tmp.def RcppExports.o array-validation.o compact-arrays.o compact-igraph.o compact-iupac.o graph-counts.o -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2026_11_08_01_50_00_17898/RtmpuuckFW/R.INSTALL11b21435857ca2/glyrepr/src'
make[1]: Entering directory '/d/temp/2026_11_08_01_50_00_17898/RtmpuuckFW/R.INSTALL11b21435857ca2/glyrepr/src'
make[1]: Leaving directory '/d/temp/2026_11_08_01_50_00_17898/RtmpuuckFW/R.INSTALL11b21435857ca2/glyrepr/src'
installing to d:/Rcompile/CRANpkg/lib/4.7/00LOCK-glyrepr/00new/glyrepr/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'glyrepr' as glyrepr_1.2.0.zip
* DONE (glyrepr)