• using R Under development (unstable) (2025-09-03 r88788 ucrt)
• using platform: x86_64-w64-mingw32
• R was compiled by     gcc.exe (GCC) 14.2.0     GNU Fortran (GCC) 14.2.0
• running under: Windows Server 2022 x64 (build 20348)
• using session charset: UTF-8
• checking for file 'forestmangr/DESCRIPTION' ... OK
• checking extension type ... Package
• this is package 'forestmangr' version '0.9.8'
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking whether package 'forestmangr' can be installed ... OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking 'build' directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s] OK
• checking whether the package can be loaded with stated dependencies ... [0s] OK
• checking whether the package can be unloaded cleanly ... [0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s] OK
• checking whether the namespace can be unloaded cleanly ... [1s] OK
• checking loading without being on the library search path ... [1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [11s] OK
• checking Rd files ... [1s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of 'data' directory ... OK
• checking data for non-ASCII characters ... [0s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from 'inst/doc' ... OK
• checking files in 'vignettes' ... OK
• checking examples ... [15s] ERROR Running examples in 'forestmangr-Ex.R' failed The error most likely occurred in: > ### Name: inv > ### Title: Calculate the inverse of a number > ### Aliases: inv > > ### ** Examples > > library(forestmangr) > data("exfm15") > head(exfm15) # A tibble: 6 × 7   STRATA STRATA_AREA PLOT PLOT_AREA DBH TH OBS    <int> <int> <int> <int> <dbl> <dbl> <fct> 1 2 45 1 810 15 23.8 N 2 2 45 1 810 13 23.8 N 3 2 45 1 810 15 24.7 N 4 2 45 1 810 13.5 23.3 N 5 2 45 1 810 15 24.3 N 6 2 45 1 810 14 22.4 N > > # Get the inverse of a vector > inv(iris$Petal.Length)   [1] 0.7142857 0.7142857 0.7692308 0.6666667 0.7142857 0.5882353 0.7142857   [8] 0.6666667 0.7142857 0.6666667 0.6666667 0.6250000 0.7142857 0.9090909  [15] 0.8333333 0.6666667 0.7692308 0.7142857 0.5882353 0.6666667 0.5882353  [22] 0.6666667 1.0000000 0.5882353 0.5263158 0.6250000 0.6250000 0.6666667  [29] 0.7142857 0.6250000 0.6250000 0.6666667 0.6666667 0.7142857 0.6666667  [36] 0.8333333 0.7692308 0.7142857 0.7692308 0.6666667 0.7692308 0.7692308  [43] 0.7692308 0.6250000 0.5263158 0.7142857 0.6250000 0.7142857 0.6666667  [50] 0.7142857 0.2127660 0.2222222 0.2040816 0.2500000 0.2173913 0.2222222  [57] 0.2127660 0.3030303 0.2173913 0.2564103 0.2857143 0.2380952 0.2500000  [64] 0.2127660 0.2777778 0.2272727 0.2222222 0.2439024 0.2222222 0.2564103  [71] 0.2083333 0.2500000 0.2040816 0.2127660 0.2325581 0.2272727 0.2083333  [78] 0.2000000 0.2222222 0.2857143 0.2631579 0.2702703 0.2564103 0.1960784  [85] 0.2222222 0.2222222 0.2127660 0.2272727 0.2439024 0.2500000 0.2272727  [92] 0.2173913 0.2500000 0.3030303 0.2380952 0.2380952 0.2380952 0.2325581  [99] 0.3333333 0.2439024 0.1666667 0.1960784 0.1694915 0.1785714 0.1724138 [106] 0.1515152 0.2222222 0.1587302 0.1724138 0.1639344 0.1960784 0.1886792 [113] 0.1818182 0.2000000 0.1960784 0.1886792 0.1818182 0.1492537 0.1449275 [120] 0.2000000 0.1754386 0.2040816 0.1492537 0.2040816 0.1754386 0.1666667 [127] 0.2083333 0.2040816 0.1785714 0.1724138 0.1639344 0.1562500 0.1785714 [134] 0.1960784 0.1785714 0.1639344 0.1785714 0.1818182 0.2083333 0.1851852 [141] 0.1785714 0.1960784 0.1960784 0.1694915 0.1754386 0.1923077 0.2000000 [148] 0.1923077 0.1851852 0.1960784 > > # Fit a model that contains the inverse of a variable, without the need to > # create a new variable for the inverse: > lm(log(TH) ~ inv(DBH), exfm15 ) Call: lm(formula = log(TH) ~ inv(DBH), data = exfm15) Coefficients: (Intercept) inv(DBH)       3.712 -8.733 > # or > lm_table(exfm15, log(TH) ~ inv(DBH) ) Error in `dplyr::mutate()`: ℹ In argument: `Qualid = purrr::map(Reg, glance_)`. Caused by error in `purrr::map()`: ℹ In index: 1. Caused by error in `ll()`: ! could not find function "ll" Backtrace:      ▆   1. ├─forestmangr::lm_table(exfm15, log(TH) ~ inv(DBH))   2. │ └─... %>% dplyr::ungroup()   3. ├─dplyr::ungroup(.)   4. ├─dplyr::mutate(...)   5. ├─dplyr:::mutate.data.frame(...)   6. │ └─dplyr:::mutate_cols(.data, dplyr_quosures(...), by)   7. │ ├─base::withCallingHandlers(...)   8. │ └─dplyr:::mutate_col(dots[[i]], data, mask, new_columns)   9. │ └─mask$eval_all_mutate(quo)  10. │ └─dplyr (local) eval()  11. ├─purrr::map(Reg, glance_)  12. │ └─purrr:::map_("list", .x, .f, ..., .progress = .progress)  13. │ ├─purrr:::with_indexed_errors(...)  14. │ │ └─base::withCallingHandlers(...)  15. │ ├─purrr:::call_with_cleanup(...)  16. │ └─forestmangr (local) .f(.x[[i]], ...)  17. │ └─tibble::tibble(...)  18. │ └─tibble:::tibble_quos(xs, .rows, .name_repair)  19. │ └─rlang::eval_tidy(xs[[j]], mask)  20. ├─broom::glance(x)  21. ├─broom:::glance.lm(x)  22. │ ├─base::with(...)  23. │ └─base::with.default(...)  24. │ └─base::eval(substitute(expr), data, enclos = parent.frame())  25. │ └─base::eval(substitute(expr), data, enclos = parent.frame())  26. │ └─tibble::tibble(...)  27. │ └─tibble:::tibble_quos(xs, .rows, .name_repair)  28. │ └─rlang::eval_tidy(xs[[j]], mask)  29. ├─stats::AIC(x)  30. ├─stats:::AIC.default(x)  31. └─base::.handleSimpleError(...)  32. └─purrr (local) h(simpleError(msg, call))  33. └─cli::cli_abort(...)  34. └─rlang::abort(...) Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [80s] ERROR Error(s) in re-building vignettes: --- re-building 'eq_group_fit_en.Rmd' using rmarkdown Quitting from eq_group_fit_en.Rmd:31-34 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NULL ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'eq_group_fit_en.Rmd' failed with diagnostics: ℹ In argument: `Qualid = purrr::map(Reg, glance_)`. Caused by error in `purrr::map()`: ℹ In index: 1. Caused by error in `ll()`: ! could not find function "ll" --- failed re-building 'eq_group_fit_en.Rmd' --- re-building 'eq_group_fit_ptbr.Rmd' using rmarkdown Quitting from eq_group_fit_ptbr.Rmd:32-35 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NULL ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'eq_group_fit_ptbr.Rmd' failed with diagnostics: ℹ In argument: `Qualid = purrr::map(Reg, glance_)`. Caused by error in `purrr::map()`: ℹ In index: 1. Caused by error in `ll()`: ! could not find function "ll" --- failed re-building 'eq_group_fit_ptbr.Rmd' --- re-building 'invent_vol_plot_en.Rmd' using rmarkdown Quitting from invent_vol_plot_en.Rmd:44-49 [unnamed-chunk-5] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NULL ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'invent_vol_plot_en.Rmd' failed with diagnostics: ℹ In argument: `Qualid = purrr::map(Reg, glance_)`. Caused by error in `purrr::map()`: ℹ In index: 1. Caused by error in `ll()`: ! could not find function "ll" --- failed re-building 'invent_vol_plot_en.Rmd' --- re-building 'invent_vol_plot_ptbr.Rmd' using rmarkdown Quitting from invent_vol_plot_ptbr.Rmd:45-50 [unnamed-chunk-5] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NULL ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'invent_vol_plot_ptbr.Rmd' failed with diagnostics: ℹ In argument: `Qualid = purrr::map(Reg, glance_)`. Caused by error in `purrr::map()`: ℹ In index: 1. Caused by error in `ll()`: ! could not find function "ll" --- failed re-building 'invent_vol_plot_ptbr.Rmd' --- re-building 'phyto_ana_en.Rmd' using rmarkdown --- finished re-building 'phyto_ana_en.Rmd' --- re-building 'phyto_ana_ptbr.Rmd' using rmarkdown --- finished re-building 'phyto_ana_ptbr.Rmd' --- re-building 'sampling_en.Rmd' using rmarkdown --- finished re-building 'sampling_en.Rmd' --- re-building 'sampling_ptbr.Rmd' using rmarkdown --- finished re-building 'sampling_ptbr.Rmd' --- re-building 'volume_est_en.Rmd' using rmarkdown Quitting from volume_est_en.Rmd:70-75 [unnamed-chunk-8] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NULL ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'volume_est_en.Rmd' failed with diagnostics: ℹ In argument: `Qualid = purrr::map(Reg, glance_)`. Caused by error in `purrr::map()`: ℹ In index: 1. Caused by error in `ll()`: ! could not find function "ll" --- failed re-building 'volume_est_en.Rmd' --- re-building 'volume_est_ptbr.Rmd' using rmarkdown Quitting from volume_est_ptbr.Rmd:75-80 [unnamed-chunk-8] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NULL ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'volume_est_ptbr.Rmd' failed with diagnostics: ℹ In argument: `Qualid = purrr::map(Reg, glance_)`. Caused by error in `purrr::map()`: ℹ In index: 1. Caused by error in `ll()`: ! could not find function "ll" --- failed re-building 'volume_est_ptbr.Rmd' --- re-building 'yield_growth_en.Rmd' using rmarkdown --- finished re-building 'yield_growth_en.Rmd' --- re-building 'yield_growth_ptbr.Rmd' using rmarkdown --- finished re-building 'yield_growth_ptbr.Rmd' SUMMARY: processing the following files failed:   'eq_group_fit_en.Rmd' 'eq_group_fit_ptbr.Rmd'   'invent_vol_plot_en.Rmd' 'invent_vol_plot_ptbr.Rmd'   'volume_est_en.Rmd' 'volume_est_ptbr.Rmd' Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [23s] OK
• checking HTML version of manual ... [12s] OK
• DONE

Status: 2 ERRORs