• using R Under development (unstable) (2025-09-03 r88788 ucrt)
• using platform: x86_64-w64-mingw32
• R was compiled by     gcc.exe (GCC) 14.2.0     GNU Fortran (GCC) 14.2.0
• running under: Windows Server 2022 x64 (build 20348)
• using session charset: UTF-8
• checking for file 'fluxfinder/DESCRIPTION' ... OK
• checking extension type ... Package
• this is package 'fluxfinder' version '1.2.1'
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking whether package 'fluxfinder' can be installed ... OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking 'build' directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s] OK
• checking whether the package can be loaded with stated dependencies ... [1s] OK
• checking whether the package can be unloaded cleanly ... [1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s] OK
• checking whether the namespace can be unloaded cleanly ... [2s] OK
• checking loading without being on the library search path ... [1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [4s] OK
• checking Rd files ... [1s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from 'inst/doc' ... OK
• checking files in 'vignettes' ... OK
• checking examples ... [2s] ERROR Running examples in 'fluxfinder-Ex.R' failed The error most likely occurred in: > ### Name: ffi_compute_fluxes > ### Title: Compute fluxes for multiple groups (measurements) > ### Aliases: ffi_compute_fluxes > > ### ** Examples > > # No grouping > ffi_compute_fluxes(cars, group_column = NULL, "speed", "dist") Error in ll(object) : could not find function "ll" Calls: ffi_compute_fluxes ... tibble_quos -> eval_tidy -> <Anonymous> -> AIC.default Execution halted
• checking for unstated dependencies in 'tests' ... OK
• checking tests ... [3s] ERROR   Running 'testthat.R' [3s] Running the tests in 'tests/testthat.R' failed. Complete output:   > # This file is part of the standard setup for testthat.   > # It is recommended that you do not modify it.   > #   > # Where should you do additional test configuration?   > # Learn more about the roles of various files in:   > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview   > # * https://testthat.r-lib.org/articles/special-files.html   >   > library(testthat)   > library(fluxfinder)   >   > test_check("fluxfinder")   [ FAIL 1 | WARN 0 | SKIP 0 | PASS 94 ]      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test-models.R:3:3'): ffi_fit_models works ───────────────────────────   Error in `ll(object)`: could not find function "ll"   Backtrace:        ▆     1. ├─fluxfinder::ffi_fit_models(cars$speed, cars$dist) at test-models.R:3:3     2. │ ├─generics::glance(mod)     3. │ └─broom:::glance.lm(mod)     4. │ ├─base::with(...)     5. │ └─base::with.default(...)     6. │ └─base::eval(substitute(expr), data, enclos = parent.frame())     7. │ └─base::eval(substitute(expr), data, enclos = parent.frame())     8. │ └─tibble::tibble(...)     9. │ └─tibble:::tibble_quos(xs, .rows, .name_repair)    10. │ └─rlang::eval_tidy(xs[[j]], mask)    11. ├─stats::AIC(x)    12. └─stats:::AIC.default(x)      [ FAIL 1 | WARN 0 | SKIP 0 | PASS 94 ]   Error: Test failures   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [8s] ERROR Error(s) in re-building vignettes: --- re-building 'integrating-gasfluxes.Rmd' using rmarkdown Quitting from integrating-gasfluxes.Rmd:29-43 [setup] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `ll()`: ! could not find function "ll" --- Backtrace:      ▆   1. ├─fluxfinder::ffi_compute_fluxes(...)   2. │ └─base::lapply(x, f, ...)   3. │ └─fluxfinder (local) FUN(X[[i]], ...)   4. │ └─fluxfinder (local) fit_function(x$.norm_time, x[, gas_column], ...)   5. │ ├─generics::glance(mod)   6. │ └─broom:::glance.lm(mod)   7. │ ├─base::with(...)   8. │ └─base::with.default(...)   9. │ └─base::eval(substitute(expr), data, enclos = parent.frame())  10. │ └─base::eval(substitute(expr), data, enclos = parent.frame())  11. │ └─tibble::tibble(...)  12. │ └─tibble:::tibble_quos(xs, .rows, .name_repair)  13. │ └─rlang::eval_tidy(xs[[j]], mask)  14. ├─stats::AIC(x)  15. └─stats:::AIC.default(x) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'integrating-gasfluxes.Rmd' failed with diagnostics: could not find function "ll" --- failed re-building 'integrating-gasfluxes.Rmd' --- re-building 'intro-to-fluxfinder.Rmd' using rmarkdown Quitting from intro-to-fluxfinder.Rmd:187-206 [compute-fluxes] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `ll()`: ! could not find function "ll" --- Backtrace:      ▆   1. ├─fluxfinder::ffi_compute_fluxes(...)   2. │ └─base::lapply(x, f, ...)   3. │ └─fluxfinder (local) FUN(X[[i]], ...)   4. │ └─fluxfinder (local) fit_function(x$.norm_time, x[, gas_column], ...)   5. │ ├─generics::glance(mod)   6. │ └─broom:::glance.lm(mod)   7. │ ├─base::with(...)   8. │ └─base::with.default(...)   9. │ └─base::eval(substitute(expr), data, enclos = parent.frame())  10. │ └─base::eval(substitute(expr), data, enclos = parent.frame())  11. │ └─tibble::tibble(...)  12. │ └─tibble:::tibble_quos(xs, .rows, .name_repair)  13. │ └─rlang::eval_tidy(xs[[j]], mask)  14. ├─stats::AIC(x)  15. └─stats:::AIC.default(x) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'intro-to-fluxfinder.Rmd' failed with diagnostics: could not find function "ll" --- failed re-building 'intro-to-fluxfinder.Rmd' SUMMARY: processing the following files failed:   'integrating-gasfluxes.Rmd' 'intro-to-fluxfinder.Rmd' Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [27s] OK
• checking HTML version of manual ... [3s] OK
• DONE

Status: 3 ERRORs