* installing *source* package 'fdacluster' ...
** this is package 'fdacluster' version '0.4.1'
** package 'fdacluster' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 14.2.0'
make[1]: Entering directory '/d/temp/2025_10_07_01_50_00_27954/RtmpaQ2C0T/R.INSTALL31a446a9c6e32/fdacluster/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from RcppExports.cpp:4:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c affineWarpingClass.cpp -o affineWarpingClass.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ../inst/include/baseDissimilarityClass.h:4,
from ../inst/include/baseWarpingClass.h:4,
from affineWarpingClass.h:4,
from affineWarpingClass.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c baseDissimilarityClass.cpp -o baseDissimilarityClass.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ../inst/include/baseDissimilarityClass.h:4,
from baseDissimilarityClass.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
baseDissimilarityClass.cpp: In member function 'FunctionPairType BaseDissimilarityFunction::GetComparableFunctions(const arma::rowvec&, const arma::rowvec&, const arma::mat&, const arma::mat&)':
baseDissimilarityClass.cpp:39:28: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
39 | if (arma::is_finite(grid1(i)) && arma::is_finite(values1.col(i)))
| ~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:518:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
baseDissimilarityClass.cpp:39:57: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = subview<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
39 | if (arma::is_finite(grid1(i)) && arma::is_finite(values1.col(i)))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
baseDissimilarityClass.cpp:53:28: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
53 | if (arma::is_finite(grid2(i)) && arma::is_finite(values2.col(i)))
| ~~~~~~~~~~~~~~~^~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
baseDissimilarityClass.cpp:53:57: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = subview<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
53 | if (arma::is_finite(grid2(i)) && arma::is_finite(values2.col(i)))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c baseOptimizerClass.cpp -o baseOptimizerClass.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ../inst/include/baseDissimilarityClass.h:4,
from ../inst/include/baseWarpingClass.h:4,
from ../inst/include/baseOptimizerClass.h:4,
from baseOptimizerClass.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c baseWarpingClass.cpp -o baseWarpingClass.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ../inst/include/baseDissimilarityClass.h:4,
from ../inst/include/baseWarpingClass.h:4,
from baseWarpingClass.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c bobyqaOptimizerClass.cpp -o bobyqaOptimizerClass.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ../inst/include/baseDissimilarityClass.h:4,
from ../inst/include/baseWarpingClass.h:4,
from ../inst/include/baseOptimizerClass.h:4,
from bobyqaOptimizerClass.h:4,
from bobyqaOptimizerClass.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c dilationWarpingClass.cpp -o dilationWarpingClass.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ../inst/include/baseDissimilarityClass.h:4,
from ../inst/include/baseWarpingClass.h:4,
from dilationWarpingClass.h:4,
from dilationWarpingClass.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c kmaModelClass.cpp -o kmaModelClass.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from kmaModelClass.h:4,
from kmaModelClass.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c kmap.cpp -o kmap.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from kmap.h:21,
from kmap.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c kumaraswamyWarpingClass.cpp -o kumaraswamyWarpingClass.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ../inst/include/baseDissimilarityClass.h:4,
from ../inst/include/baseWarpingClass.h:4,
from kumaraswamyWarpingClass.h:4,
from kumaraswamyWarpingClass.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c l2DissimilarityClass.cpp -o l2DissimilarityClass.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ../inst/include/baseDissimilarityClass.h:4,
from l2DissimilarityClass.h:4,
from l2DissimilarityClass.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c lowessCenterClass.cpp -o lowessCenterClass.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ../inst/include/baseDissimilarityClass.h:4,
from ../inst/include/baseCenterClass.h:4,
from lowessCenterClass.h:4,
from lowessCenterClass.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
lowessCenterClass.cpp: In member function 'virtual CenterType LowessCenterMethod::GetCenter(const arma::mat&, const arma::cube&, const std::shared_ptr<BaseDissimilarityFunction>&)':
lowessCenterClass.cpp:41:28: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
41 | if (arma::is_finite(inputGrid(i, j)) && arma::is_finite(inputValues(i, l, j)))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:518:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
lowessCenterClass.cpp:41:64: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
41 | if (arma::is_finite(inputGrid(i, j)) && arma::is_finite(inputValues(i, l, j)))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c meanCenterClass.cpp -o meanCenterClass.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ../inst/include/baseDissimilarityClass.h:4,
from ../inst/include/baseCenterClass.h:4,
from meanCenterClass.h:4,
from meanCenterClass.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
meanCenterClass.cpp: In member function 'virtual CenterType MeanCenterMethod::GetCenter(const arma::mat&, const arma::cube&, const std::shared_ptr<BaseDissimilarityFunction>&)':
meanCenterClass.cpp:66:30: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
66 | for (int i = halfPoint;i < numberOfPoints;++i)
| ~~^~~~~~~~~~~~~~~~
meanCenterClass.cpp:76:26: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
76 | for (int k = i;k < numberOfPoints;++k)
| ~~^~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c medianCenterClass.cpp -o medianCenterClass.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ../inst/include/baseDissimilarityClass.h:4,
from ../inst/include/baseCenterClass.h:4,
from medianCenterClass.h:4,
from medianCenterClass.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
medianCenterClass.cpp: In member function 'virtual CenterType MedianCenterMethod::GetCenter(const arma::mat&, const arma::cube&, const std::shared_ptr<BaseDissimilarityFunction>&)':
medianCenterClass.cpp:66:28: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
66 | for (int i = halfPoint;i < numberOfPoints;++i)
| ~~^~~~~~~~~~~~~~~~
medianCenterClass.cpp:76:24: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
76 | for (int k = i;k < numberOfPoints;++k)
| ~~^~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c medoidCenterClass.cpp -o medoidCenterClass.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ../inst/include/baseDissimilarityClass.h:4,
from ../inst/include/baseCenterClass.h:4,
from medoidCenterClass.h:4,
from medoidCenterClass.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c noWarpingClass.cpp -o noWarpingClass.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ../inst/include/baseDissimilarityClass.h:4,
from ../inst/include/baseWarpingClass.h:4,
from noWarpingClass.h:4,
from noWarpingClass.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c normalizedL2DissimilarityClass.cpp -o normalizedL2DissimilarityClass.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ../inst/include/baseDissimilarityClass.h:4,
from normalizedL2DissimilarityClass.h:4,
from normalizedL2DissimilarityClass.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c pearsonDissimilarityClass.cpp -o pearsonDissimilarityClass.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ../inst/include/baseDissimilarityClass.h:4,
from pearsonDissimilarityClass.h:4,
from pearsonDissimilarityClass.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c polyCenterClass.cpp -o polyCenterClass.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ../inst/include/baseDissimilarityClass.h:4,
from ../inst/include/baseCenterClass.h:4,
from polyCenterClass.h:4,
from polyCenterClass.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
polyCenterClass.cpp: In member function 'virtual CenterType PolyCenterMethod::GetCenter(const arma::mat&, const arma::cube&, const std::shared_ptr<BaseDissimilarityFunction>&)':
polyCenterClass.cpp:39:28: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
39 | if (arma::is_finite(inputGrid(i, j)) && arma::is_finite(inputValues(i, l, j)))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:518:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
polyCenterClass.cpp:39:64: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
39 | if (arma::is_finite(inputGrid(i, j)) && arma::is_finite(inputValues(i, l, j)))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c shiftWarpingClass.cpp -o shiftWarpingClass.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from ../inst/include/baseDissimilarityClass.h:4,
from ../inst/include/baseWarpingClass.h:4,
from shiftWarpingClass.h:4,
from shiftWarpingClass.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/nloptr/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c utilityFunctions.cpp -o utilityFunctions.o
In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32,
from utilityFunctions.h:4,
from utilityFunctions.cpp:1:
D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -shared -s -static-libgcc -o fdacluster.dll tmp.def RcppExports.o affineWarpingClass.o baseDissimilarityClass.o baseOptimizerClass.o baseWarpingClass.o bobyqaOptimizerClass.o dilationWarpingClass.o kmaModelClass.o kmap.o kumaraswamyWarpingClass.o l2DissimilarityClass.o lowessCenterClass.o meanCenterClass.o medianCenterClass.o medoidCenterClass.o noWarpingClass.o normalizedL2DissimilarityClass.o pearsonDissimilarityClass.o polyCenterClass.o shiftWarpingClass.o utilityFunctions.o -fopenmp -LD:/RCompile/recent/R/bin/x64 -lRlapack -LD:/RCompile/recent/R/bin/x64 -lRblas -lgfortran -lquadmath -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2025_10_07_01_50_00_27954/RtmpaQ2C0T/R.INSTALL31a446a9c6e32/fdacluster/src'
make[1]: Entering directory '/d/temp/2025_10_07_01_50_00_27954/RtmpaQ2C0T/R.INSTALL31a446a9c6e32/fdacluster/src'
make[1]: Leaving directory '/d/temp/2025_10_07_01_50_00_27954/RtmpaQ2C0T/R.INSTALL31a446a9c6e32/fdacluster/src'
installing to d:/Rcompile/CRANpkg/lib/4.6/00LOCK-fdacluster/00new/fdacluster/libs/x64
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'fdacluster' as fdacluster_0.4.1.zip
* DONE (fdacluster)