- using R Under development (unstable) (2025-08-30 r88742 ucrt)
- using platform: x86_64-w64-mingw32
- R was compiled by
gcc.exe (GCC) 14.2.0
GNU Fortran (GCC) 14.2.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
- checking for file 'clarify/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'clarify' version '0.2.1'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'clarify' can be installed ... OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking 'build' directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s] OK
- checking whether the package can be loaded with stated dependencies ... [1s] OK
- checking whether the package can be unloaded cleanly ... [1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s] OK
- checking whether the namespace can be unloaded cleanly ... [1s] OK
- checking loading without being on the library search path ... [1s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [8s] OK
- checking Rd files ... [1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from 'inst/doc' ... OK
- checking files in 'vignettes' ... OK
- checking examples ... [19s] OK
- checking for unstated dependencies in 'tests' ... OK
- checking tests ... [52s] ERROR
Running 'testthat.R' [51s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(clarify)
>
> test_check("clarify")
[ FAIL 3 | WARN 1 | SKIP 7 | PASS 4759 ]
══ Skipped tests (7) ═══════════════════════════════════════════════════════════
• !file.exists(test_path("fixtures", "mimira.rds")) is TRUE (1):
'test-misim.R:124:3'
• 'estimatr' has problems with model.frame.iv_robust(), which causes an error
with insight::get_data(). (1): 'test-sim_ame.R:594:3'
• On CRAN (4): 'test-sim.R:659:3', 'test-sim.R:729:3', 'test-sim_ame.R:671:3',
'test-sim_ame.R:750:3'
• predict() is bugged for glmRob() (1): 'test-sim_ame.R:1390:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-sim.R:231:3'): sim() works with betareg::betareg() ───────────
colnames(s$sim.coefs) (`actual`) not equal to c(...) (`expected`).
actual | expected
[5] "racehispan" | "racehispan" [5]
[6] "racewhite" | "racewhite" [6]
[7] "re74" | "re74" [7]
[8] "(Intercept)" - "(phi)_(Intercept)" [8]
[9] "treat" - "(phi)_treat" [9]
[10] "age" - "(phi)_age" [10]
── Error ('test-sim_ame.R:317:3'): sim_ame() works with MASS::polr() ───────────
Error in `sim_ame(s, "treat", contrast = "diff", type = "mean", verbose = FALSE)`: Not all units received a predicted value, suggesting a bug.
Backtrace:
▆
1. └─clarify::sim_ame(...) at test-sim_ame.R:317:3
2. └─clarify:::.err("not all units received a predicted value, suggesting a bug")
3. └─chk::err(..., call = pkg_caller_call(start = 2))
4. └─rlang::abort(msg, class = class, !!!args[named], call = call)
── Error ('test-sim_ame.R:369:3'): sim_ame() works with betareg::betareg() ─────
Error in `sim_ame(s, "treat", verbose = FALSE)`: `FUN` failed to run on an initial check with the following error:
Predicted values could not be extracted from the model.
Backtrace:
▆
1. └─clarify::sim_ame(s, "treat", verbose = FALSE) at test-sim_ame.R:369:3
2. └─clarify::sim_apply(sim, FUN = FUN, verbose = verbose, cl = cl)
3. └─clarify:::.err(...)
4. └─chk::err(..., call = pkg_caller_call(start = 2))
5. └─rlang::abort(msg, class = class, !!!args[named], call = call)
[ FAIL 3 | WARN 1 | SKIP 7 | PASS 4759 ]
Error: Test failures
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [199s] OK
- checking PDF version of manual ... [21s] OK
- checking HTML version of manual ... [3s] OK
- DONE
Status: 1 ERROR