- using R Under development (unstable) (2026-02-18 r89435 ucrt)
- using platform: x86_64-w64-mingw32
- R was compiled by
gcc.exe (GCC) 14.3.0
GNU Fortran (GCC) 14.3.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
* current time: 2026-02-19 12:01:20 UTC
- checking for file 'cifti/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'cifti' version '0.5.0'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'cifti' can be installed ... OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking 'build' directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s] OK
- checking whether the package can be loaded with stated dependencies ... [1s] OK
- checking whether the package can be unloaded cleanly ... [1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s] OK
- checking whether the namespace can be unloaded cleanly ... [1s] OK
- checking loading without being on the library search path ... [1s] OK
- checking whether startup messages can be suppressed ... [1s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [5s] OK
- checking Rd files ... [1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from 'inst/doc' ... OK
- checking files in 'vignettes' ... OK
- checking examples ... [2s] OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [22s] ERROR
Error(s) in re-building vignettes:
--- re-building 'cifti_work.Rmd' using rmarkdown
--- finished re-building 'cifti_work.Rmd'
--- re-building 'test_dims_MSC.Rmd' using rmarkdown
trying URL 'https://www.nitrc.org/frs/download.php/8541'
trying URL 'https://s3.amazonaws.com/openneuro/ds000224/ds000224_R1.0.2/uncompressed/derivatives/surface_pipeline/sub-MSC01/processed_restingstate_timecourses/ses-func01/cifti/sub-MSC01_ses-func01_task-rest_bold_32k_fsLR.dtseries.nii'
Content type 'binary/octet-stream' length 215994464 bytes (206.0 MB)
==================================================
downloaded 206.0 MB
Quitting from test_dims_MSC.Rmd:50-71 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `file()`:
! cannot open the connection
---
Backtrace:
▆
1. └─cifti::read_cifti(file.path(test_dir, "Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii"))
2. └─cifti::get_cifti_type(fname, verbose = verbose)
3. └─base::lapply(...)
4. └─cifti (local) FUN(X[[i]], ...)
5. ├─base::do.call(run_func, args = args)
6. └─cifti (local) `<fn>`(...)
7. └─cifti::matrix_ind_map_nodes(fname)
8. └─cifti::cifti_xml(fname)
9. └─cifti::cifti_xml_txt(...)
10. └─cifti::nifti_2_hdr(fname = fname)
11. └─base::file(fname, "rb")
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'test_dims_MSC.Rmd' failed with diagnostics:
cannot open the connection
--- failed re-building 'test_dims_MSC.Rmd'
SUMMARY: processing the following file failed:
'test_dims_MSC.Rmd'
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... [19s] OK
- checking HTML version of manual ... [4s] OK
- DONE
Status: 1 ERROR