* installing *source* package 'bigsnpr' ...
** package 'bigsnpr' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 12.3.0'
make[1]: Entering directory '/d/temp/Rtmp06uOFn/R.INSTALL3e204f8dc81/bigsnpr/src'
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c bed-acc-xptr.cpp -o bed-acc-xptr.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c bed-fun.cpp -o bed-fun.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c bed-mat-acc.cpp -o bed-mat-acc.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c bed-prod-vec.cpp -o bed-prod-vec.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c clumping-bed.cpp -o clumping-bed.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c clumping-cached.cpp -o clumping-cached.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c clumping.cpp -o clumping.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c colstats.cpp -o colstats.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c copy-subset.cpp -o copy-subset.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c corr.cpp -o corr.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c corr_with_cov.cpp -o corr_with_cov.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c impute-simple.cpp -o impute-simple.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c lassosum2.cpp -o lassosum2.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ld-scores-sfbm.cpp -o ld-scores-sfbm.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ld-scores.cpp -o ld-scores.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ldpred2-auto.cpp -o ldpred2-auto.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ldpred2-sampling.cpp -o ldpred2-sampling.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ldpred2.cpp -o ldpred2.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c multLinReg.cpp -o multLinReg.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c prod-bgen.cpp -o prod-bgen.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c read-bgen.cpp -o read-bgen.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c read-plink.cpp -o read-plink.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c sp-colsumssq-sym.cpp -o sp-colsumssq-sym.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c split-LD.cpp -o split-LD.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/bigsparser/include' -I'D:/RCompile/CRANpkg/lib/4.4/bigstatsr/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/rmio/include' -I'D:/RCompile/CRANpkg/lib/4.4/roptim/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -DARMA_64BIT_WORD=1   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c write-plink.cpp -o write-plink.o
g++ -std=gnu++17 -shared -s -static-libgcc -o bigsnpr.dll tmp.def RcppExports.o bed-acc-xptr.o bed-fun.o bed-mat-acc.o bed-prod-vec.o clumping-bed.o clumping-cached.o clumping.o colstats.o copy-subset.o corr.o corr_with_cov.o impute-simple.o lassosum2.o ld-scores-sfbm.o ld-scores.o ldpred2-auto.o ldpred2-sampling.o ldpred2.o multLinReg.o prod-bgen.o read-bgen.o read-plink.o sp-colsumssq-sym.o split-LD.o write-plink.o -fopenmp -LD:/RCompile/recent/R/bin/x64 -lRlapack -LD:/RCompile/recent/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -lz -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR
make[1]: Leaving directory '/d/temp/Rtmp06uOFn/R.INSTALL3e204f8dc81/bigsnpr/src'
make[1]: Entering directory '/d/temp/Rtmp06uOFn/R.INSTALL3e204f8dc81/bigsnpr/src'
make[1]: Leaving directory '/d/temp/Rtmp06uOFn/R.INSTALL3e204f8dc81/bigsnpr/src'
installing to d:/Rcompile/CRANpkg/lib/4.4/00LOCK-bigsnpr/00new/bigsnpr/libs/x64
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'bigsnpr' as bigsnpr_1.12.2.zip
* DONE (bigsnpr)