• using R Under development (unstable) (2026-10-10 r90659 ucrt)
• using platform: x86_64-w64-mingw32
• R was compiled by     gcc.exe (GCC) 14.3.0     GNU Fortran (GCC) 14.3.0
• running under: Windows Server 2022 x64 (build 20348)
• using session charset: UTF-8 * current time: 2026-10-12 12:03:28 UTC
• checking for file 'SelfControlledCohort/DESCRIPTION' ... OK
• checking extension type ... Package
• this is package 'SelfControlledCohort' version '2.1.0'
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking whether package 'SelfControlledCohort' can be installed ... OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking 'build' directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s] OK
• checking whether the package can be loaded with stated dependencies ... [2s] OK
• checking whether the package can be unloaded cleanly ... [2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s] OK
• checking whether the namespace can be unloaded cleanly ... [2s] OK
• checking loading without being on the library search path ... [2s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [9s] OK
• checking Rd files ... [1s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from 'inst/doc' ... OK
• checking files in 'vignettes' ... OK
• checking examples ... [4s] OK
• checking for unstated dependencies in 'tests' ... OK
• checking tests ... [5s] ERROR   Running 'testthat.R' [5s] Running the tests in 'tests/testthat.R' failed. Complete output:   > library(testthat)   > library(SelfControlledCohort)   Loading required package: DatabaseConnector   > options(dbms = "sqlite")   > test_check("SelfControlledCohort")   attempting to download GiBleed   trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'   Content type 'application/zip' length 6861852 bytes (6.5 MB)   ==================================================   downloaded 6.5 MB      attempting to extract and load: D:\temp\2026_10_12_01_50_00_23142\Rtmp4U28kH/GiBleed_5.3.zip to: D:\temp\2026_10_12_01_50_00_23142\Rtmp4U28kH/GiBleed_5.3.sqlite   Error in `source_dir()`:   ! Failed to evaluate './setup.R'.   Caused by error:   ! not an error   Backtrace:        ▆     1. ├─testthat::test_check("SelfControlledCohort")     2. │ └─testthat::test_dir(...)     3. │ └─testthat:::test_files(...)     4. │ └─testthat:::test_files_serial(...)     5. │ └─testthat:::test_files_setup_state(...)     6. │ └─testthat::source_test_setup(".", env)     7. │ └─testthat::source_dir(path, "^setup.*\\.[rR]$", env = env, wrap = FALSE)     8. │ └─base::lapply(...)     9. │ └─testthat (local) FUN(X[[i]], ...)    10. │ └─testthat::source_file(...)    11. │ ├─base::withCallingHandlers(...)    12. │ └─base::eval(exprs, env)    13. │ └─base::eval(exprs, env)    14. │ └─SelfControlledCohort:::getTestDatabaseConnectionDetails(...) at ./setup.R:13:1    15. │ └─Eunomia::getDatabaseFile(...) at ./helper.R:39:5    16. │ └─Eunomia::extractLoadData(...)    17. │ └─Eunomia::loadDataFiles(...)    18. │ ├─DBI::dbExecute(conn = connection, statement = statement)    19. │ └─DBI::dbExecute(conn = connection, statement = statement)    20. │ ├─DBI::dbSendStatement(conn, statement, ...)    21. │ └─DBI::dbSendStatement(conn, statement, ...)    22. │ ├─DBI::dbSendQuery(conn, statement, ...)    23. │ └─RSQLite::dbSendQuery(conn, statement, ...)    24. │ └─RSQLite (local) .local(conn, statement, ...)    25. │ ├─methods::new(...)    26. │ │ ├─methods::initialize(value, ...)    27. │ │ └─methods::initialize(value, ...)    28. │ └─RSQLite:::result_create(conn@ptr, statement)    29. └─base::.handleSimpleError(`<fn>`, "not an error", base::quote(NULL))    30. └─testthat (local) h(simpleError(msg, call))    31. └─cli::cli_abort(...)    32. └─rlang::abort(...)   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [10s] ERROR Error(s) in re-building vignettes: --- re-building 'StudyDiagnostics.Rmd' using rmarkdown --- finished re-building 'StudyDiagnostics.Rmd' --- re-building 'UsingSelfControlledCohort.Rmd' using rmarkdown trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip' Content type 'application/zip' length 6861852 bytes (6.5 MB) ================================================== downloaded 6.5 MB Quitting from UsingSelfControlledCohort.Rmd:31-43 [setup] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error: ! not an error --- Backtrace:      ▆   1. └─Eunomia::getEunomiaConnectionDetails()   2. └─Eunomia::getDatabaseFile(...)   3. └─Eunomia::extractLoadData(...)   4. └─Eunomia::loadDataFiles(...)   5. ├─DBI::dbExecute(conn = connection, statement = statement)   6. └─DBI::dbExecute(conn = connection, statement = statement)   7. ├─DBI::dbSendStatement(conn, statement, ...)   8. └─DBI::dbSendStatement(conn, statement, ...)   9. ├─DBI::dbSendQuery(conn, statement, ...)  10. └─RSQLite::dbSendQuery(conn, statement, ...)  11. └─RSQLite (local) .local(conn, statement, ...)  12. ├─methods::new(...)  13. │ ├─methods::initialize(value, ...)  14. │ └─methods::initialize(value, ...)  15. └─RSQLite:::result_create(conn@ptr, statement) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'UsingSelfControlledCohort.Rmd' failed with diagnostics: not an error --- failed re-building 'UsingSelfControlledCohort.Rmd' SUMMARY: processing the following file failed:   'UsingSelfControlledCohort.Rmd' Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [21s] OK
• checking HTML version of manual ... [2s] OK
• DONE

Status: 2 ERRORs