* installing *source* package 'RcppPlanc' ...
** this is package 'RcppPlanc' version '2.0.12'
** package 'RcppPlanc' successfully unpacked and MD5 sums checked
** using staged installation
-- Building for: Unix Makefiles
-- The C compiler identification is GNU 14.2.0
-- The CXX compiler identification is GNU 14.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: D:/rtools45/x86_64-w64-mingw32.static.posix/bin/gcc.exe - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: D:/rtools45/x86_64-w64-mingw32.static.posix/bin/g++.exe - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
This is libplanc 1.0.2 containing component nmflib 1.0.1
-- Found OpenMP_C: -fopenmp (found version "4.5")
-- Found OpenMP_CXX: -fopenmp (found version "4.5")
-- Found OpenMP: TRUE (found version "4.5")
-- Found R: D:/RCompile/recent/R/bin/x64/R.exe (found version "R Under development (unstable) (2025-06-30 r88369 ucrt) -- "Unsuffered Consequences"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under the terms of the
GNU General Public License versions 2 or 3.
For more information about these matters see
https://www.gnu.org/licenses/.
")
-- Could NOT find MKL (missing: MKL_DIR)
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE
CMake Warning (dev) at D:/rtools45/x86_64-w64-mingw32.static.posix/share/cmake-3.30.4/Modules/FetchContent.cmake:1953 (message):
Calling FetchContent_Populate(HighFive) is deprecated, call
FetchContent_MakeAvailable(HighFive) instead. Policy CMP0169 can be set to
OLD to allow FetchContent_Populate(HighFive) to be called directly for now,
but the ability to call it with declared details will be removed completely
in a future version.
Call Stack (most recent call first):
CMakeLists.txt:137 (FetchContent_Populate)
This warning is for project developers. Use -Wno-dev to suppress it.
-- Found HDF5: hdf5-static (found version "1.12.1") found components: C
-- Performing Test HDF5_LINKS
-- Performing Test HDF5_LINKS - Success
-- Found R_Rcpp: D:/RCompile/CRANpkg/lib/4.6/Rcpp
-- Found R_RcppArmadillo: D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo
-- Found R_RcppProgress: D:/RCompile/CRANpkg/lib/4.6/RcppProgress
-- Performing Test UNSAFE_MATH
-- Performing Test UNSAFE_MATH - Success
-- Performing Test FINITE_MATH
-- Performing Test FINITE_MATH - Success
-- Performing Test TRAPPING_MATH
-- Performing Test TRAPPING_MATH - Success
-- Performing Test ERRNO_MATH
-- Performing Test ERRNO_MATH - Success
-- Performing Test UNSIGNED_ZERO
-- Performing Test UNSIGNED_ZERO - Success
-- Performing Test RECIPROCAL_MATH
-- Performing Test RECIPROCAL_MATH - Success
-- Performing Test ARCH_AVX
-- Performing Test ARCH_AVX - Success
-- Performing Test HAS_POPCNT
-- Performing Test HAS_POPCNT - Success
-- Looking for cblas.h
-- Looking for cblas.h - found
-- A cache variable, namely HWLOC_DIR, has been set to specify the install directory of HWLOC
-- Checking for one of the modules 'hwloc'
-- Looking for HWLOC - not found using PkgConfig.
Perhaps you should add the directory containing hwloc.pc to
the PKG_CONFIG_PATH environment variable.
-- Looking for HWLOC - PkgConfig not used
-- Looking for hwloc -- hwloc.h not found
-- Looking for hwloc -- lib hwloc not found
-- Could NOT find HWLOC (missing: HWLOC_LIBRARIES HWLOC_WORKS)
-- Looking for dlfcn.h
-- Looking for dlfcn.h - found
-- NNLS_SOURCE_DIR = D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nnls
-- NMF_SOURCE_DIR = D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf
-- NMFLIB_COMMON = D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success
-- Configuring done (36.6s)
-- Generating done (0.1s)
-- Build files have been written to: D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build
gmake.exe[1]: Entering directory 'D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -SD:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc -BD:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build --check-build-system CMakeFiles/Makefile.cmake 0
D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E cmake_progress_start D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/CMakeFiles D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build//CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
make -f CMakeFiles/utils.dir/build.make CMakeFiles/utils.dir/depend
make[3]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E cmake_depends "Unix Makefiles" D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/CMakeFiles/utils.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
make -f CMakeFiles/utils.dir/build.make CMakeFiles/utils.dir/build
make[3]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
[ 5%] Building CXX object CMakeFiles/utils.dir/common/utils.cpp.obj
D:/rtools45/x86_64-w64-mingw32.static.posix/bin/g++.exe -std=gnu++17 -DUSING_R @CMakeFiles/utils.dir/includes_CXX.rsp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -O2 -g -DNDEBUG -fno-keep-inline-dllexport -fopenmp -MD -MT CMakeFiles/utils.dir/common/utils.cpp.obj -MF CMakeFiles/utils.dir/common/utils.cpp.obj.d -o CMakeFiles/utils.dir/common/utils.cpp.obj -c D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/utils.cpp
In file included from D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/utils.cpp:4:
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/utils.hpp: In instantiation of 'void makeSparse(double, T*) [with T = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/utils.cpp:69:30: required from here
69 | makeSparse<arma::mat>(sparsity, &W);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/utils.hpp:81:23: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
81 | for (int j = 0; j < X->n_cols; j++) {
| ~~^~~~~~~~~~~
make[3]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
[ 5%] Built target utils
make -f CMakeFiles/hwloc.dir/build.make CMakeFiles/hwloc.dir/depend
make[3]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E cmake_depends "Unix Makefiles" D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/CMakeFiles/hwloc.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
make -f CMakeFiles/hwloc.dir/build.make CMakeFiles/hwloc.dir/build
make[3]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
[ 11%] Creating directories for 'hwloc'
D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -Dcfgdir= -P D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/tmp/hwloc-mkdirs.cmake
D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E touch D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-stamp/hwloc-mkdir
[ 17%] Performing download step (download, verify and extract) for 'hwloc'
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -DCMAKE_MESSAGE_LOG_LEVEL=VERBOSE -P D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-stamp/download-hwloc.cmake
-- Downloading...
dst='D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-2.11.2.tar.gz'
timeout='none'
inactivity timeout='none'
-- Using src='https://download.open-mpi.org/release/hwloc/v2.11/hwloc-2.11.2.tar.gz'
-- [download 0% complete]
-- [download 1% complete]
-- [download 2% complete]
-- [download 3% complete]
-- [download 4% complete]
-- [download 5% complete]
-- [download 6% complete]
-- [download 7% complete]
-- [download 8% complete]
-- [download 9% complete]
-- [download 10% complete]
-- [download 11% complete]
-- [download 12% complete]
-- [download 13% complete]
-- [download 14% complete]
-- [download 15% complete]
-- [download 16% complete]
-- [download 17% complete]
-- [download 18% complete]
-- [download 19% complete]
-- [download 20% complete]
-- [download 21% complete]
-- [download 22% complete]
-- [download 23% complete]
-- [download 24% complete]
-- [download 25% complete]
-- [download 26% complete]
-- [download 27% complete]
-- [download 28% complete]
-- [download 29% complete]
-- [download 30% complete]
-- [download 31% complete]
-- [download 32% complete]
-- [download 33% complete]
-- [download 34% complete]
-- [download 35% complete]
-- [download 36% complete]
-- [download 37% complete]
-- [download 38% complete]
-- [download 39% complete]
-- [download 40% complete]
-- [download 41% complete]
-- [download 42% complete]
-- [download 43% complete]
-- [download 44% complete]
-- [download 45% complete]
-- [download 46% complete]
-- [download 47% complete]
-- [download 48% complete]
-- [download 49% complete]
-- [download 50% complete]
-- [download 51% complete]
-- [download 52% complete]
-- [download 53% complete]
-- [download 54% complete]
-- [download 55% complete]
-- [download 56% complete]
-- [download 57% complete]
-- [download 58% complete]
-- [download 59% complete]
-- [download 60% complete]
-- [download 61% complete]
-- [download 62% complete]
-- [download 63% complete]
-- [download 64% complete]
-- [download 65% complete]
-- [download 66% complete]
-- [download 67% complete]
-- [download 68% complete]
-- [download 69% complete]
-- [download 70% complete]
-- [download 71% complete]
-- [download 72% complete]
-- [download 73% complete]
-- [download 74% complete]
-- [download 75% complete]
-- [download 76% complete]
-- [download 77% complete]
-- [download 78% complete]
-- [download 79% complete]
-- [download 80% complete]
-- [download 81% complete]
-- [download 82% complete]
-- [download 83% complete]
-- [download 84% complete]
-- [download 85% complete]
-- [download 86% complete]
-- [download 87% complete]
-- [download 88% complete]
-- [download 89% complete]
-- [download 90% complete]
-- [download 91% complete]
-- [download 92% complete]
-- [download 93% complete]
-- [download 94% complete]
-- [download 95% complete]
-- [download 96% complete]
-- [download 97% complete]
-- [download 98% complete]
-- [download 99% complete]
-- [download 100% complete]
-- verifying file...
file='D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-2.11.2.tar.gz'
-- Downloading... done
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -DCMAKE_MESSAGE_LOG_LEVEL=VERBOSE -P D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-stamp/verify-hwloc.cmake
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -DCMAKE_MESSAGE_LOG_LEVEL=VERBOSE -P D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-stamp/extract-hwloc.cmake
-- extracting...
src='D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-2.11.2.tar.gz'
dst='D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc'
-- extracting... [tar xfz]
-- extracting... [analysis]
-- extracting... [rename]
-- extracting... [clean up]
-- extracting... done
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E touch D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-stamp/hwloc-download
[ 23%] No update step for 'hwloc'
D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E echo_append
D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E touch D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-stamp/hwloc-update
[ 29%] Performing patch step for 'hwloc'
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E cat D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/../../tools/patches/00_remove_stdio.patch D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/../../tools/patches/01_remove_sprintf.patch D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/../../tools/patches/02_adjust_windows_types.patch D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/../../tools/patches/03_remove_abort.patch | D:/rtools45/usr/bin/patch.exe -p1 -l
patching file hwloc/components.c
patching file hwloc/distances.c
patching file hwloc/memattrs.c
patching file hwloc/pci-common.c
patching file hwloc/topology-aix.c
patching file hwloc/topology-bgq.c
patching file hwloc/topology-cuda.c
patching file hwloc/topology-darwin.c
patching file hwloc/topology-levelzero.c
patching file hwloc/topology-linux.c
patching file hwloc/topology-nvml.c
patching file hwloc/topology-opencl.c
patching file hwloc/topology-pci.c
patching file hwloc/topology-rsmi.c
patching file hwloc/topology-solaris.c
patching file hwloc/topology-synthetic.c
patching file hwloc/topology-windows.c
patching file hwloc/topology-x86.c
patching file hwloc/topology-xml-libxml.c
patching file hwloc/topology-xml-nolibxml.c
patching file hwloc/topology-xml.c
patching file hwloc/topology.c
patching file hwloc/cpukinds.c
patching file hwloc/topology-freebsd.c
patching file hwloc/topology-linux.c
patching file hwloc/topology-rsmi.c
patching file hwloc/topology-windows.c
patching file hwloc/topology-xml.c
patching file include/hwloc/cuda.h
patching file include/hwloc/cudart.h
patching file include/hwloc/levelzero.h
patching file include/hwloc/nvml.h
patching file include/hwloc/opencl.h
patching file include/hwloc/openfabrics-verbs.h
patching file include/hwloc/rsmi.h
patching file hwloc/topology-x86.c
patching file hwloc/topology-windows.c
patching file hwloc/distances.c
patching file hwloc/topology-linux.c
patching file hwloc/memattrs.c
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E touch D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-stamp/hwloc-patch
[ 35%] Performing configure step for 'hwloc'
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E env LD=ld "CFLAGS=-DNDEBUG -pedantic -Wstrict-prototypes -O2 -Wall -std=gnu2x -mfpmath=sse -msse2 -mstackrealign " sh ../hwloc/configure --with-pic --prefix=/out/ --disable-picky --enable-shared=no --enable-static=yes --disable-cairo --disable-libxml2 --disable-io --disable-plugin-dlopen --disable-plugin-ltdl --enable-embedded-mode --build=x86_64-w64-mingw32 && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E touch_nocreate ../hwloc/aclocal.m4 && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E touch_nocreate ../hwloc/Makefile.in && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E touch_nocreate ../hwloc/configure && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E touch_nocreate config.status
###
### Configuring hwloc distribution tarball
### Startup tests
###
checking build system type... x86_64-w64-mingw32
checking host system type... x86_64-w64-mingw32
checking target system type... x86_64-w64-mingw32
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether UID '197608' is supported by ustar format... yes
checking whether GID '197121' is supported by ustar format... yes
checking how to create a ustar tar archive... gnutar
checking whether make supports nested variables... (cached) yes
checking whether make supports the include directive... yes (GNU style)
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.exe
checking for suffix of executables... .exe
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... gcc3
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for wchar.h... yes
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking whether _XOPEN_SOURCE should be defined... no
checking for ar... ar
checking the archiver (ar) interface... ar
checking how to print strings... printf
checking for a sed that does not truncate output... sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... ld
checking if the linker (ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /x86_64-w64-mingw32.static.posix/bin/nm -B
checking the name lister (/x86_64-w64-mingw32.static.posix/bin/nm -B) interface... BSD nm
checking whether ln -s works... no, using cp -pR
checking the maximum length of command line arguments... 8192
checking how to convert x86_64-w64-mingw32 file names to x86_64-w64-mingw32 format... func_convert_file_msys_to_w32
checking how to convert x86_64-w64-mingw32 file names to toolchain format... func_convert_file_msys_to_w32
checking for ld option to reload object files... -r
checking for file... file
checking for objdump... objdump
checking how to recognize dependent libraries... file_magic ^x86 archive import|^x86 DLL
checking for dlltool... dlltool
checking how to associate runtime and link libraries... func_cygming_dll_for_implib
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /x86_64-w64-mingw32.static.posix/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for dlfcn.h... yes
checking for as... as
checking for dlltool... (cached) dlltool
checking for objdump... (cached) objdump
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -DDLL_EXPORT -DPIC
checking if gcc PIC flag -DDLL_EXPORT -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (ld) supports shared libraries... yes
checking dynamic linker characteristics... Win32 ld.exe
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... no
checking whether to build static libraries... yes
checking whether the compiler supports GNU C++... yes
checking whether g++ -std=gnu++17 accepts -g... yes
checking for g++ -std=gnu++17 option to enable C++11 features... none needed
checking dependency style of g++ -std=gnu++17... gcc3
checking how to run the C++ preprocessor... g++ -std=gnu++17 -E
checking for ld used by g++ -std=gnu++17... ld
checking if the linker (ld) is GNU ld... yes
checking whether the g++ -std=gnu++17 linker (ld) supports shared libraries... yes
checking for g++ -std=gnu++17 option to produce PIC... -DDLL_EXPORT -DPIC
checking if g++ -std=gnu++17 PIC flag -DDLL_EXPORT -DPIC works... yes
checking if g++ -std=gnu++17 static flag -static works... yes
checking if g++ -std=gnu++17 supports -c -o file.o... yes
checking if g++ -std=gnu++17 supports -c -o file.o... (cached) yes
checking whether the g++ -std=gnu++17 linker (ld) supports shared libraries... yes
checking dynamic linker characteristics... Win32 ld.exe
checking how to hardcode library paths into programs... immediate
checking for gcc... (cached) gcc
checking whether the compiler supports GNU C... (cached) yes
checking whether gcc accepts -g... (cached) yes
checking for gcc option to enable C11 features... (cached) none needed
checking whether gcc understands -c and -o together... (cached) yes
checking dependency style of gcc... (cached) gcc3
checking for gcc options needed to detect all undeclared functions... none needed
checking for pkg-config... /x86_64-w64-mingw32.static.posix/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking how to run the C preprocessor... gcc -E
checking for X... no
###
### Configuring hwloc core
###
checking hwloc building mode... embedded
configure: hwloc builddir: /d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build
configure: hwloc srcdir: /d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc
configure: Detected VPATH build
checking for hwloc version... 2.11.2
checking if want hwloc maintainer support... disabled (embedded mode)
checking for hwloc directory prefix... (none)
checking for hwloc symbol prefix... hwloc_
checking for the C compiler vendor... gnu
checking size of void *... 8
checking which OS support to include... Windows
checking which CPU support to include... x86_64
checking size of unsigned long... 4
checking size of unsigned int... 4
checking for __attribute__... yes
checking for __attribute__(aligned)... yes
checking for __attribute__(always_inline)... yes
checking for __attribute__(cold)... yes
checking for __attribute__(const)... yes
checking for __attribute__(deprecated)... yes
checking for __attribute__(constructor)... yes
checking for __attribute__(format)... yes
checking for __attribute__(hot)... yes
checking for __attribute__(malloc)... yes
checking for __attribute__(may_alias)... yes
checking for __attribute__(no_instrument_function)... yes
checking for __attribute__(nonnull)... yes
checking for __attribute__(noreturn)... yes
checking for __attribute__(packed)... yes
checking for __attribute__(pure)... yes
checking for __attribute__(sentinel)... yes
checking for __attribute__(unused)... yes
checking for __attribute__(warn_unused_result)... yes
checking for __attribute__(weak_alias)... yes
checking whether to enable symbol visibility... no (disabled)
checking whether the C compiler rejects function calls with too many arguments... yes
checking whether the C compiler rejects function calls with too few arguments... yes
checking for unistd.h... (cached) yes
checking for dirent.h... yes
checking for strings.h... (cached) yes
checking for ctype.h... yes
checking for strcasecmp... yes
checking whether strcasecmp is declared... yes
checking whether function strcasecmp has a complete prototype... yes
checking for strncasecmp... yes
checking whether strncasecmp is declared... yes
checking whether function strncasecmp has a complete prototype... yes
checking for strftime... yes
checking for setlocale... yes
checking for stdint.h... (cached) yes
checking for sys/mman.h... no
**** Windows-specific checks
checking for windows.h... yes
checking for KAFFINITY... yes
checking for PROCESSOR_CACHE_TYPE... yes
checking for CACHE_DESCRIPTOR... yes
checking for LOGICAL_PROCESSOR_RELATIONSHIP... yes
checking for RelationProcessorPackage... no
checking for GROUP_AFFINITY... yes
checking for PROCESSOR_RELATIONSHIP... yes
checking for NUMA_NODE_RELATIONSHIP... yes
checking for CACHE_RELATIONSHIP... yes
checking for PROCESSOR_GROUP_INFO... yes
checking for GROUP_RELATIONSHIP... yes
checking for SYSTEM_LOGICAL_PROCESSOR_INFORMATION_EX... yes
checking for PSAPI_WORKING_SET_EX_BLOCK... no
checking for PSAPI_WORKING_SET_EX_INFORMATION... no
checking for PROCESSOR_NUMBER... yes
checking whether GetModuleFileName is declared... yes
checking for main in -lgdi32... yes
checking for PostQuitMessage in -luser32... yes
checking for lib... no
**** end of Windows-specific checks
checking for sys/param.h... yes
checking for sys/sysctl.h... no
checking for sysctl... no
checking for sysctlbyname... no
checking whether pthread_setaffinity_np is declared... no
checking whether pthread_getaffinity_np is declared... no
checking whether fabsf is declared... yes
checking for fabsf in -lm... yes
checking whether modff is declared... yes
checking for modff in -lm... yes
checking whether _SC_NPROCESSORS_ONLN is declared... no
checking whether _SC_NPROCESSORS_CONF is declared... no
checking whether _SC_NPROC_ONLN is declared... no
checking whether _SC_NPROC_CONF is declared... no
checking whether _SC_PAGESIZE is declared... no
checking whether _SC_PAGE_SIZE is declared... no
checking whether _SC_LARGE_PAGESIZE is declared... no
checking for mach/mach_init.h... no
checking for mach_init.h... no
checking for mach/mach_host.h... no
checking whether strtoull is declared... yes
checking for ssize_t... yes
checking whether snprintf is declared... yes
checking whether _strdup is declared... yes
checking whether _putenv is declared... yes
checking whether snprintf is correct... yes
checking whether getprogname is declared... no
checking whether getexecname is declared... no
checking for program_invocation_name... no
checking for __progname... no
checking for ffs... no
checking for ffsl... no
checking for fls... no
checking for flsl... no
checking for clz... no
checking for clzl... no
checking for openat... no
checking for malloc.h... yes
checking for getpagesize... yes
checking for memalign... no
checking for posix_memalign... no
checking for sys/utsname.h... no
checking for uname... no
checking for pthread_mutex_lock... yes
**** x86 CPUID configuration
checking for x86 cpuid... yes
**** end of x86 CPUID configuration
**** component and plugin-specific configuration
checking if plugin support is enabled... no
checking components to build statically... noos xml synthetic xml_nolibxml windows x86
checking components to build as plugins...
**** end of component and plugin configuration
checking for diff... /usr/bin/diff
###
### Performing final hwloc configuration
###
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating include/Makefile
config.status: creating hwloc/Makefile
config.status: creating include/private/autogen/config.h
config.status: creating include/hwloc/autogen/config.h
config.status: executing depfiles commands
config.status: executing libtool commands
-----------------------------------------------------------------------------
Hwloc optional build support status (more details can be found above):
Probe / display I/O devices: no
Graphical output: no (disabled in embedded mode)
XML input / output: basic
Plugin support: no
-----------------------------------------------------------------------------
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E touch D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-stamp/hwloc-configure
[ 41%] Performing build step for 'hwloc'
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build && make
make[4]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build'
/bin/sh ./config.status
config.status: creating Makefile
config.status: creating include/Makefile
config.status: creating hwloc/Makefile
config.status: creating include/private/autogen/config.h
config.status: include/private/autogen/config.h is unchanged
config.status: creating include/hwloc/autogen/config.h
config.status: include/hwloc/autogen/config.h is unchanged
config.status: executing depfiles commands
config.status: executing libtool commands
Making all in include
make[5]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build/include'
make[5]: Nothing to be done for 'all'.
make[5]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build/include'
Making all in hwloc
make[5]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build/hwloc'
CC topology.lo
CC traversal.lo
CC distances.lo
../../hwloc/hwloc/distances.c: In function 'hwloc_internal_distances_print_matrix':
../../hwloc/hwloc/distances.c:37:15: warning: unused variable 'j' [-Wunused-variable]
37 | unsigned i, j;
| ^
../../hwloc/hwloc/distances.c:37:12: warning: unused variable 'i' [-Wunused-variable]
37 | unsigned i, j;
| ^
../../hwloc/hwloc/distances.c:36:7: warning: unused variable 'gp' [-Wunused-variable]
36 | int gp = !HWLOC_DIST_TYPE_USE_OS_INDEX(dist->unique_type);
| ^~
../../hwloc/hwloc/distances.c:35:19: warning: unused variable 'values' [-Wunused-variable]
35 | hwloc_uint64_t *values = dist->values;
| ^~~~~~
../../hwloc/hwloc/distances.c:34:16: warning: unused variable 'objs' [-Wunused-variable]
34 | hwloc_obj_t *objs = dist->objs;
| ^~~~
../../hwloc/hwloc/distances.c:33:12: warning: unused variable 'nbobjs' [-Wunused-variable]
33 | unsigned nbobjs = dist->nbobjs;
| ^~~~~~
CC memattrs.lo
../../hwloc/hwloc/memattrs.c: In function 'hwloc_memattr_get_initiators':
../../hwloc/hwloc/memattrs.c:799:9: warning: unused variable 'err' [-Wunused-variable]
799 | int err = from_internal_location(&imi->initiator, &initiators[i]);
| ^~~
CC cpukinds.lo
CC components.lo
../../hwloc/hwloc/components.c: In function 'hwloc_disc_components_enable_others':
../../hwloc/hwloc/components.c:883:9: warning: variable 'first' set but not used [-Wunused-but-set-variable]
883 | int first = 1;
| ^~~~~
CC bind.lo
CC bitmap.lo
CC pci-common.lo
CC diff.lo
CC shmem.lo
CC misc.lo
CC base64.lo
CC topology-noos.lo
CC topology-synthetic.lo
../../hwloc/hwloc/topology-synthetic.c: In function 'hwloc__export_synthetic_memory_children':
../../hwloc/hwloc/topology-synthetic.c:1443:20: warning: variable 'warned' set but not used [-Wunused-but-set-variable]
1443 | static int warned = 0;
| ^~~~~~
CC topology-xml.lo
../../hwloc/hwloc/topology-xml.c: In function 'hwloc__xml_import_object_attr':
../../hwloc/hwloc/topology-xml.c:276:20: warning: variable 'warned' set but not used [-Wunused-but-set-variable]
276 | static int warned = 0;
| ^~~~~~
../../hwloc/hwloc/topology-xml.c:376:20: warning: variable 'warned' set but not used [-Wunused-but-set-variable]
376 | static int warned = 0;
| ^~~~~~
../../hwloc/hwloc/topology-xml.c: In function 'hwloc__xml_import_report_outoforder':
../../hwloc/hwloc/topology-xml.c:792:15: warning: unused variable 'origprogname' [-Wunused-variable]
792 | const char *origprogname = hwloc_obj_get_info_by_name(topology->levels[0][0], "ProcessName");
| ^~~~~~~~~~~~
../../hwloc/hwloc/topology-xml.c:791:15: warning: unused variable 'origversion' [-Wunused-variable]
791 | const char *origversion = hwloc_obj_get_info_by_name(topology->levels[0][0], "hwlocVersion");
| ^~~~~~~~~~~
CC topology-xml-nolibxml.lo
CC topology-windows.lo
CC topology-x86.lo
CCLD libhwloc_embedded.la
make[5]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build/hwloc'
make[5]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build'
make[5]: Nothing to be done for 'all-am'.
make[5]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build'
make[4]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build'
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E touch D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-stamp/hwloc-build
[ 47%] Performing install step for 'hwloc'
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build && make install
make[4]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build'
Making install in include
make[5]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build/include'
make[6]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build/include'
make[6]: Nothing to be done for 'install-exec-am'.
make[6]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build/include'
make[5]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build/include'
Making install in hwloc
make[5]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build/hwloc'
make[6]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build/hwloc'
make install-exec-hook
make[7]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build/hwloc'
[ ! -r .libs/libhwloc.def ] || /usr/bin/install -c .libs/libhwloc.def D:/rtools45/out/lib
make[7]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build/hwloc'
make[6]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build/hwloc'
make[5]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build/hwloc'
make[5]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build'
make[6]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build'
make[6]: Nothing to be done for 'install-exec-am'.
make[6]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build'
make[5]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build'
make[4]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build'
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-build && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E touch D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-stamp/hwloc-install
[ 52%] Completed 'hwloc'
D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E make_directory D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/CMakeFiles
D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E touch D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/CMakeFiles/hwloc-complete
D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E touch D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc-stamp/hwloc-done
D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E remove_directory D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/hwloc-prefix/src/hwloc/utils/lstopo
make[3]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
[ 52%] Built target hwloc
make -f CMakeFiles/hw_detect.dir/build.make CMakeFiles/hw_detect.dir/depend
make[3]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E cmake_depends "Unix Makefiles" D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/CMakeFiles/hw_detect.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
make -f CMakeFiles/hw_detect.dir/build.make CMakeFiles/hw_detect.dir/build
make[3]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
[ 58%] Building C object CMakeFiles/hw_detect.dir/common/hw_detect.c.obj
D:/rtools45/x86_64-w64-mingw32.static.posix/bin/gcc.exe -DUSING_R @CMakeFiles/hw_detect.dir/includes_C.rsp -pedantic -Wstrict-prototypes -O2 -Wall -std=gnu2x -mfpmath=sse -msse2 -mstackrealign -O2 -g -DNDEBUG -std=gnu99 -fopenmp -funsafe-math-optimizations -ffinite-math-only -fno-trapping-math -fno-math-errno -fno-signed-zeros -freciprocal-math -mavx -mpopcnt -MD -MT CMakeFiles/hw_detect.dir/common/hw_detect.c.obj -MF CMakeFiles/hw_detect.dir/common/hw_detect.c.obj.d -o CMakeFiles/hw_detect.dir/common/hw_detect.c.obj -c D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/hw_detect.c
make[3]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
[ 58%] Built target hw_detect
make -f CMakeFiles/detect_blas.dir/build.make CMakeFiles/detect_blas.dir/depend
make[3]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E cmake_depends "Unix Makefiles" D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/CMakeFiles/detect_blas.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
make -f CMakeFiles/detect_blas.dir/build.make CMakeFiles/detect_blas.dir/build
make[3]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
[ 64%] Building C object CMakeFiles/detect_blas.dir/common/detect_blas.c.obj
D:/rtools45/x86_64-w64-mingw32.static.posix/bin/gcc.exe -DUSING_R @CMakeFiles/detect_blas.dir/includes_C.rsp -pedantic -Wstrict-prototypes -O2 -Wall -std=gnu2x -mfpmath=sse -msse2 -mstackrealign -O2 -g -DNDEBUG -std=gnu99 -fopenmp -funsafe-math-optimizations -ffinite-math-only -fno-trapping-math -fno-math-errno -fno-signed-zeros -freciprocal-math -mavx -mpopcnt -MD -MT CMakeFiles/detect_blas.dir/common/detect_blas.c.obj -MF CMakeFiles/detect_blas.dir/common/detect_blas.c.obj.d -o CMakeFiles/detect_blas.dir/common/detect_blas.c.obj -c D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/detect_blas.c
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/detect_blas.c: In function 'get_openblas_parallel':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/detect_blas.c:16:46: warning: ISO C forbids initialization between function pointer and 'void *' [-Wpedantic]
16 | const openblas_init_t parallel_address = dlsym(libloc, "openblas_get_parallel");
| ^~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/detect_blas.c: In function 'get_openblas_set':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/detect_blas.c:21:40: warning: ISO C forbids initialization between function pointer and 'void *' [-Wpedantic]
21 | const openblas_set_t set_address = dlsym(libloc, "openblas_set_num_threads");
| ^~~~~
make[3]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
[ 64%] Built target detect_blas
make -f nmf/CMakeFiles/nmflib.dir/build.make nmf/CMakeFiles/nmflib.dir/depend
make[3]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E cmake_depends "Unix Makefiles" D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/nmf D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/nmf/CMakeFiles/nmflib.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
make -f nmf/CMakeFiles/nmflib.dir/build.make nmf/CMakeFiles/nmflib.dir/build
make[3]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
[ 70%] Building CXX object nmf/CMakeFiles/nmflib.dir/nmf_lib.cpp.obj
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/nmf && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/g++.exe -std=gnu++17 -DUSING_R -D_GNU_SOURCE -D_POSIX_C_SOURCE=200809L -Dnmflib_EXPORTS @CMakeFiles/nmflib.dir/includes_CXX.rsp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -O2 -g -DNDEBUG -fno-keep-inline-dllexport -fopenmp -funsafe-math-optimizations -ffinite-math-only -fno-trapping-math -fno-math-errno -fno-signed-zeros -freciprocal-math -mavx -mpopcnt -MD -MT nmf/CMakeFiles/nmflib.dir/nmf_lib.cpp.obj -MF CMakeFiles/nmflib.dir/nmf_lib.cpp.obj.d -o CMakeFiles/nmflib.dir/nmf_lib.cpp.obj -c D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.cpp
In file included from D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:5,
from D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.cpp:4:
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp:124:1: warning: multi-line comment [-Wcomment]
124 | // arma::mat* Hptr = this->Hi[i].get();\
| ^
In file included from D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp:12:
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp: In member function 'void planc::INMF<T>::load_whole_E(arma::uword) [with T = planc::H5Mat; arma::uword = long long unsigned int]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp:409:47: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'long long unsigned int'} [-Wsign-compare]
409 | if (numChunks * this->INMF_CHUNK_SIZE < n) numChunks++;
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp:413:25: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'long long unsigned int'} [-Wsign-compare]
413 | if (spanEnd > n - 1) spanEnd = n - 1;
| ~~~~~~~~^~~~~~~
In file included from D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:4:
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp: In instantiation of 'class planc::symmEmbeddedNMFDriver<arma::Mat<double> >':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:44:31: required from 'static planc::nmfOutput<eT> planc::nmflib<T, eT>::symNMF(const T&, const arma::uword&, const arma::uword&, const double&, const std::string&, const int&, const arma::Mat<eTb>&) [with T = arma::Mat<double>; eT = double; arma::uword = long long unsigned int; std::string = std::__cxx11::basic_string<char>]'
44 | symmEmbeddedNMFDriver nmfRunner(options);
| ^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_types.inc:1:1: required from here
8 | template planc::nmfOutput<double> planc::nmflib<T, double>::symNMF(const T&x, const arma::uword&k, const arma::uword&niter, const double& lambda, const std::string&algo, const int&nCores, const arma::Mat<double>&Hinit);
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp:16:22: warning: 'void planc::EmbeddedNMFDriver<T>::parseParams(const planc::internalParams<T>&) [with T = arma::Mat<double>]' was hidden [-Woverloaded-virtual=]
16 | virtual void parseParams(const internalParams<T>&pc) {
| ^~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp:73:14: note: by 'void planc::symmEmbeddedNMFDriver<T>::parseParams(const planc::internalSymmParams<T>&) [with T = arma::Mat<double>]'
73 | void parseParams(const internalSymmParams<T>&pc) {
| ^~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp: In instantiation of 'class planc::symmEmbeddedNMFDriver<arma::SpMat<double> >':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:44:31: required from 'static planc::nmfOutput<eT> planc::nmflib<T, eT>::symNMF(const T&, const arma::uword&, const arma::uword&, const double&, const std::string&, const int&, const arma::Mat<eTb>&) [with T = arma::SpMat<double>; eT = double; arma::uword = long long unsigned int; std::string = std::__cxx11::basic_string<char>]'
44 | symmEmbeddedNMFDriver nmfRunner(options);
| ^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_types.inc:3:1: required from here
8 | template planc::nmfOutput<double> planc::nmflib<T, double>::symNMF(const T&x, const arma::uword&k, const arma::uword&niter, const double& lambda, const std::string&algo, const int&nCores, const arma::Mat<double>&Hinit);
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp:16:22: warning: 'void planc::EmbeddedNMFDriver<T>::parseParams(const planc::internalParams<T>&) [with T = arma::SpMat<double>]' was hidden [-Woverloaded-virtual=]
16 | virtual void parseParams(const internalParams<T>&pc) {
| ^~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp:73:14: note: by 'void planc::symmEmbeddedNMFDriver<T>::parseParams(const planc::internalSymmParams<T>&) [with T = arma::SpMat<double>]'
73 | void parseParams(const internalSymmParams<T>&pc) {
| ^~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp: In instantiation of 'planc::BPPINMF<T>::BPPINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double) [with T = arma::Mat<double>; arma::uword = long long unsigned int]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:57:20: required from 'static planc::inmfOutput<eT> planc::nmflib<T, eT>::bppinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const double&, const arma::uword&, const bool&, const int&) [with T = arma::Mat<double>; eT = double; arma::uword = long long unsigned int]'
57 | BPPINMF<T> solver(objectList, k, lambda);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:1:1: required from here
13 | template planc::inmfOutput<double> planc::nmflib<T, double>::bppinmf(std::vector<std::shared_ptr<T>> objectlist, const arma::uword &k, const double &lambda, const arma::uword &niter, const bool &verbose, const int &nCores); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp:217:29: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
217 | if (this->k > this->m) {
| ~~~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp: In instantiation of 'planc::BPPINMF<T>::BPPINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double, std::vector<arma::Mat<double> >, std::vector<arma::Mat<double> >, arma::mat) [with T = arma::Mat<double>; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:81:20: required from 'static planc::inmfOutput<eT> planc::nmflib<T, eT>::bppinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const double&, const arma::uword&, const bool&, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, const arma::mat&, const int&) [with T = arma::Mat<double>; eT = double; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]'
81 | BPPINMF<T> solver(objectList, k, lambda, HinitList, VinitList, Winit);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:1:1: required from here
14 | template planc::inmfOutput<double> planc::nmflib<T, double>::bppinmf(std::vector<std::shared_ptr<T>> objectlist, const arma::uword &k, const double &lambda, const arma::uword &niter, const bool &verbose, const std::vector<arma::mat> &HinitList, const std::vector<arma::mat> &VinitList, const arma::mat &Winit, const int &nCores); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp:235:29: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
235 | if (this->k > this->m) {
| ~~~~~~~~^~~~~~~~~
In file included from D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:7:
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'planc::ONLINEINMF<T1>::ONLINEINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double) [with T1 = arma::Mat<double>; arma::uword = long long unsigned int]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:146:23: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = arma::Mat<double>; eT = double; arma::uword = long long unsigned int]'
146 | ONLINEINMF<T> solver(matPtrVec, k, lambda);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:1:1: required from here
16 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const arma::uword &k, const int &nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:573:29: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
573 | if (this->k > this->m) {
| ~~~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'planc::ONLINEINMF<T1>::ONLINEINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double, std::vector<arma::Mat<double> >, std::vector<arma::Mat<double> >, arma::mat) [with T1 = arma::Mat<double>; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:190:23: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, const arma::mat&, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = arma::Mat<double>; eT = double; arma::mat = arma::Mat<double>; arma::uword = long long unsigned int]'
190 | ONLINEINMF<T> solver(matPtrVec, k, lambda, Hinit, Vinit, Winit);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:1:1: required from here
17 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const std::vector<arma::mat> &Hinit, const std::vector<arma::mat> &Vinit, const arma::mat &Winit, const std::vector<arma::mat> &Ainit, const std::vector<arma::mat> &Binit, std::vector<std::shared_ptr<T>> matPtrVecNew, const arma::uword &k, const int& nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:606:29: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
606 | if (this->k > this->m) {
| ~~~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'void planc::ONLINEINMF<T1>::setB(const std::vector<arma::Mat<double> >&) [with T1 = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:192:20: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, const arma::mat&, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = arma::Mat<double>; eT = double; arma::mat = arma::Mat<double>; arma::uword = long long unsigned int]'
192 | solver.setB(Binit);
| ~~~~~~~~~~~^~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:1:1: required from here
17 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const std::vector<arma::mat> &Hinit, const std::vector<arma::mat> &Vinit, const arma::mat &Winit, const std::vector<arma::mat> &Ainit, const std::vector<arma::mat> &Binit, std::vector<std::shared_ptr<T>> matPtrVecNew, const arma::uword &k, const int& nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:704:41: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const long long unsigned int'} and 'int' [-Wsign-compare]
704 | if (Binit[i].n_rows != this->m || Binit[i].n_cols != this->k) {
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp: In instantiation of 'void planc::INMF<T>::setW(const arma::mat&, bool) [with T = arma::Mat<double>; arma::mat = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:230:20: required from 'static std::vector<arma::Mat<eTb> > planc::nmflib<T, eT>::oinmf_project(std::vector<std::shared_ptr<_Tp> >, const arma::mat&, std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&) [with T = arma::Mat<double>; eT = double; arma::mat = arma::Mat<double>; arma::uword = long long unsigned int]'
230 | solver.setW(Winit, false);
| ~~~~~~~~~~~^~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:1:1: required from here
18 | template std::vector<arma::Mat<double>> planc::nmflib<T, double>::oinmf_project(std::vector<std::shared_ptr<T>> matPtrVec, const arma::mat &Winit, std::vector<std::shared_ptr<T>> matPtrVecNew, const arma::uword &k, const int& nCores, const double &lambda); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp:281:57: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const long long unsigned int'} and 'int' [-Wsign-compare]
281 | if (Winit.n_cols != this->k || Winit.n_rows != this->m) {
| ~~~~~~~~~~~~~^~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp: In instantiation of 'planc::BPPINMF<T>::BPPINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double) [with T = arma::SpMat<double>; arma::uword = long long unsigned int]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:57:20: required from 'static planc::inmfOutput<eT> planc::nmflib<T, eT>::bppinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const double&, const arma::uword&, const bool&, const int&) [with T = arma::SpMat<double>; eT = double; arma::uword = long long unsigned int]'
57 | BPPINMF<T> solver(objectList, k, lambda);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:3:1: required from here
13 | template planc::inmfOutput<double> planc::nmflib<T, double>::bppinmf(std::vector<std::shared_ptr<T>> objectlist, const arma::uword &k, const double &lambda, const arma::uword &niter, const bool &verbose, const int &nCores); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp:217:29: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
217 | if (this->k > this->m) {
| ~~~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp: In instantiation of 'planc::BPPINMF<T>::BPPINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double, std::vector<arma::Mat<double> >, std::vector<arma::Mat<double> >, arma::mat) [with T = arma::SpMat<double>; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:81:20: required from 'static planc::inmfOutput<eT> planc::nmflib<T, eT>::bppinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const double&, const arma::uword&, const bool&, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, const arma::mat&, const int&) [with T = arma::SpMat<double>; eT = double; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]'
81 | BPPINMF<T> solver(objectList, k, lambda, HinitList, VinitList, Winit);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:3:1: required from here
14 | template planc::inmfOutput<double> planc::nmflib<T, double>::bppinmf(std::vector<std::shared_ptr<T>> objectlist, const arma::uword &k, const double &lambda, const arma::uword &niter, const bool &verbose, const std::vector<arma::mat> &HinitList, const std::vector<arma::mat> &VinitList, const arma::mat &Winit, const int &nCores); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp:235:29: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
235 | if (this->k > this->m) {
| ~~~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'planc::ONLINEINMF<T1>::ONLINEINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double) [with T1 = arma::SpMat<double>; arma::uword = long long unsigned int]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:146:23: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = arma::SpMat<double>; eT = double; arma::uword = long long unsigned int]'
146 | ONLINEINMF<T> solver(matPtrVec, k, lambda);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:3:1: required from here
16 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const arma::uword &k, const int &nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:573:29: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
573 | if (this->k > this->m) {
| ~~~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'planc::ONLINEINMF<T1>::ONLINEINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double, std::vector<arma::Mat<double> >, std::vector<arma::Mat<double> >, arma::mat) [with T1 = arma::SpMat<double>; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:190:23: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, const arma::mat&, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = arma::SpMat<double>; eT = double; arma::mat = arma::Mat<double>; arma::uword = long long unsigned int]'
190 | ONLINEINMF<T> solver(matPtrVec, k, lambda, Hinit, Vinit, Winit);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:3:1: required from here
17 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const std::vector<arma::mat> &Hinit, const std::vector<arma::mat> &Vinit, const arma::mat &Winit, const std::vector<arma::mat> &Ainit, const std::vector<arma::mat> &Binit, std::vector<std::shared_ptr<T>> matPtrVecNew, const arma::uword &k, const int& nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:606:29: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
606 | if (this->k > this->m) {
| ~~~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'void planc::ONLINEINMF<T1>::setB(const std::vector<arma::Mat<double> >&) [with T1 = arma::SpMat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:192:20: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, const arma::mat&, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = arma::SpMat<double>; eT = double; arma::mat = arma::Mat<double>; arma::uword = long long unsigned int]'
192 | solver.setB(Binit);
| ~~~~~~~~~~~^~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:3:1: required from here
17 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const std::vector<arma::mat> &Hinit, const std::vector<arma::mat> &Vinit, const arma::mat &Winit, const std::vector<arma::mat> &Ainit, const std::vector<arma::mat> &Binit, std::vector<std::shared_ptr<T>> matPtrVecNew, const arma::uword &k, const int& nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:704:41: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const long long unsigned int'} and 'int' [-Wsign-compare]
704 | if (Binit[i].n_rows != this->m || Binit[i].n_cols != this->k) {
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp: In instantiation of 'void planc::INMF<T>::setW(const arma::mat&, bool) [with T = arma::SpMat<double>; arma::mat = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:230:20: required from 'static std::vector<arma::Mat<eTb> > planc::nmflib<T, eT>::oinmf_project(std::vector<std::shared_ptr<_Tp> >, const arma::mat&, std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&) [with T = arma::SpMat<double>; eT = double; arma::mat = arma::Mat<double>; arma::uword = long long unsigned int]'
230 | solver.setW(Winit, false);
| ~~~~~~~~~~~^~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:3:1: required from here
18 | template std::vector<arma::Mat<double>> planc::nmflib<T, double>::oinmf_project(std::vector<std::shared_ptr<T>> matPtrVec, const arma::mat &Winit, std::vector<std::shared_ptr<T>> matPtrVecNew, const arma::uword &k, const int& nCores, const double &lambda); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp:281:57: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const long long unsigned int'} and 'int' [-Wsign-compare]
281 | if (Winit.n_cols != this->k || Winit.n_rows != this->m) {
| ~~~~~~~~~~~~~^~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp: In instantiation of 'planc::BPPINMF<T>::BPPINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double) [with T = planc::H5Mat; arma::uword = long long unsigned int]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:57:20: required from 'static planc::inmfOutput<eT> planc::nmflib<T, eT>::bppinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const double&, const arma::uword&, const bool&, const int&) [with T = planc::H5Mat; eT = double; arma::uword = long long unsigned int]'
57 | BPPINMF<T> solver(objectList, k, lambda);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:5:1: required from here
13 | template planc::inmfOutput<double> planc::nmflib<T, double>::bppinmf(std::vector<std::shared_ptr<T>> objectlist, const arma::uword &k, const double &lambda, const arma::uword &niter, const bool &verbose, const int &nCores); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp:217:29: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
217 | if (this->k > this->m) {
| ~~~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp: In instantiation of 'planc::BPPINMF<T>::BPPINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double, std::vector<arma::Mat<double> >, std::vector<arma::Mat<double> >, arma::mat) [with T = planc::H5Mat; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:81:20: required from 'static planc::inmfOutput<eT> planc::nmflib<T, eT>::bppinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const double&, const arma::uword&, const bool&, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, const arma::mat&, const int&) [with T = planc::H5Mat; eT = double; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]'
81 | BPPINMF<T> solver(objectList, k, lambda, HinitList, VinitList, Winit);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:5:1: required from here
14 | template planc::inmfOutput<double> planc::nmflib<T, double>::bppinmf(std::vector<std::shared_ptr<T>> objectlist, const arma::uword &k, const double &lambda, const arma::uword &niter, const bool &verbose, const std::vector<arma::mat> &HinitList, const std::vector<arma::mat> &VinitList, const arma::mat &Winit, const int &nCores); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp:235:29: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
235 | if (this->k > this->m) {
| ~~~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'planc::ONLINEINMF<T1>::ONLINEINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double) [with T1 = planc::H5Mat; arma::uword = long long unsigned int]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:146:23: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = planc::H5Mat; eT = double; arma::uword = long long unsigned int]'
146 | ONLINEINMF<T> solver(matPtrVec, k, lambda);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:5:1: required from here
16 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const arma::uword &k, const int &nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:573:29: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
573 | if (this->k > this->m) {
| ~~~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'planc::ONLINEINMF<T1>::ONLINEINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double, std::vector<arma::Mat<double> >, std::vector<arma::Mat<double> >, arma::mat) [with T1 = planc::H5Mat; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:190:23: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, const arma::mat&, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = planc::H5Mat; eT = double; arma::mat = arma::Mat<double>; arma::uword = long long unsigned int]'
190 | ONLINEINMF<T> solver(matPtrVec, k, lambda, Hinit, Vinit, Winit);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:5:1: required from here
17 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const std::vector<arma::mat> &Hinit, const std::vector<arma::mat> &Vinit, const arma::mat &Winit, const std::vector<arma::mat> &Ainit, const std::vector<arma::mat> &Binit, std::vector<std::shared_ptr<T>> matPtrVecNew, const arma::uword &k, const int& nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:606:29: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
606 | if (this->k > this->m) {
| ~~~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'void planc::ONLINEINMF<T1>::setB(const std::vector<arma::Mat<double> >&) [with T1 = planc::H5Mat]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:192:20: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, const arma::mat&, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = planc::H5Mat; eT = double; arma::mat = arma::Mat<double>; arma::uword = long long unsigned int]'
192 | solver.setB(Binit);
| ~~~~~~~~~~~^~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:5:1: required from here
17 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const std::vector<arma::mat> &Hinit, const std::vector<arma::mat> &Vinit, const arma::mat &Winit, const std::vector<arma::mat> &Ainit, const std::vector<arma::mat> &Binit, std::vector<std::shared_ptr<T>> matPtrVecNew, const arma::uword &k, const int& nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:704:41: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const long long unsigned int'} and 'int' [-Wsign-compare]
704 | if (Binit[i].n_rows != this->m || Binit[i].n_cols != this->k) {
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp: In instantiation of 'void planc::INMF<T>::setW(const arma::mat&, bool) [with T = planc::H5Mat; arma::mat = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:230:20: required from 'static std::vector<arma::Mat<eTb> > planc::nmflib<T, eT>::oinmf_project(std::vector<std::shared_ptr<_Tp> >, const arma::mat&, std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&) [with T = planc::H5Mat; eT = double; arma::mat = arma::Mat<double>; arma::uword = long long unsigned int]'
230 | solver.setW(Winit, false);
| ~~~~~~~~~~~^~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:5:1: required from here
18 | template std::vector<arma::Mat<double>> planc::nmflib<T, double>::oinmf_project(std::vector<std::shared_ptr<T>> matPtrVec, const arma::mat &Winit, std::vector<std::shared_ptr<T>> matPtrVecNew, const arma::uword &k, const int& nCores, const double &lambda); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp:281:57: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const long long unsigned int'} and 'int' [-Wsign-compare]
281 | if (Winit.n_cols != this->k || Winit.n_rows != this->m) {
| ~~~~~~~~~~~~~^~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp: In instantiation of 'planc::BPPINMF<T>::BPPINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double) [with T = planc::H5SpMat; arma::uword = long long unsigned int]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:57:20: required from 'static planc::inmfOutput<eT> planc::nmflib<T, eT>::bppinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const double&, const arma::uword&, const bool&, const int&) [with T = planc::H5SpMat; eT = double; arma::uword = long long unsigned int]'
57 | BPPINMF<T> solver(objectList, k, lambda);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:7:1: required from here
13 | template planc::inmfOutput<double> planc::nmflib<T, double>::bppinmf(std::vector<std::shared_ptr<T>> objectlist, const arma::uword &k, const double &lambda, const arma::uword &niter, const bool &verbose, const int &nCores); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp:217:29: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
217 | if (this->k > this->m) {
| ~~~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp: In instantiation of 'planc::BPPINMF<T>::BPPINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double, std::vector<arma::Mat<double> >, std::vector<arma::Mat<double> >, arma::mat) [with T = planc::H5SpMat; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:81:20: required from 'static planc::inmfOutput<eT> planc::nmflib<T, eT>::bppinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const double&, const arma::uword&, const bool&, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, const arma::mat&, const int&) [with T = planc::H5SpMat; eT = double; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]'
81 | BPPINMF<T> solver(objectList, k, lambda, HinitList, VinitList, Winit);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:7:1: required from here
14 | template planc::inmfOutput<double> planc::nmflib<T, double>::bppinmf(std::vector<std::shared_ptr<T>> objectlist, const arma::uword &k, const double &lambda, const arma::uword &niter, const bool &verbose, const std::vector<arma::mat> &HinitList, const std::vector<arma::mat> &VinitList, const arma::mat &Winit, const int &nCores); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp:235:29: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
235 | if (this->k > this->m) {
| ~~~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'planc::ONLINEINMF<T1>::ONLINEINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double) [with T1 = planc::H5SpMat; arma::uword = long long unsigned int]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:146:23: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = planc::H5SpMat; eT = double; arma::uword = long long unsigned int]'
146 | ONLINEINMF<T> solver(matPtrVec, k, lambda);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:7:1: required from here
16 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const arma::uword &k, const int &nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:573:29: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
573 | if (this->k > this->m) {
| ~~~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'planc::ONLINEINMF<T1>::ONLINEINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double, std::vector<arma::Mat<double> >, std::vector<arma::Mat<double> >, arma::mat) [with T1 = planc::H5SpMat; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:190:23: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, const arma::mat&, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = planc::H5SpMat; eT = double; arma::mat = arma::Mat<double>; arma::uword = long long unsigned int]'
190 | ONLINEINMF<T> solver(matPtrVec, k, lambda, Hinit, Vinit, Winit);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:7:1: required from here
17 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const std::vector<arma::mat> &Hinit, const std::vector<arma::mat> &Vinit, const arma::mat &Winit, const std::vector<arma::mat> &Ainit, const std::vector<arma::mat> &Binit, std::vector<std::shared_ptr<T>> matPtrVecNew, const arma::uword &k, const int& nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:606:29: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
606 | if (this->k > this->m) {
| ~~~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'void planc::ONLINEINMF<T1>::setB(const std::vector<arma::Mat<double> >&) [with T1 = planc::H5SpMat]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:192:20: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, const arma::mat&, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = planc::H5SpMat; eT = double; arma::mat = arma::Mat<double>; arma::uword = long long unsigned int]'
192 | solver.setB(Binit);
| ~~~~~~~~~~~^~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:7:1: required from here
17 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const std::vector<arma::mat> &Hinit, const std::vector<arma::mat> &Vinit, const arma::mat &Winit, const std::vector<arma::mat> &Ainit, const std::vector<arma::mat> &Binit, std::vector<std::shared_ptr<T>> matPtrVecNew, const arma::uword &k, const int& nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:704:41: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const long long unsigned int'} and 'int' [-Wsign-compare]
704 | if (Binit[i].n_rows != this->m || Binit[i].n_cols != this->k) {
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp: In instantiation of 'void planc::INMF<T>::setW(const arma::mat&, bool) [with T = planc::H5SpMat; arma::mat = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:230:20: required from 'static std::vector<arma::Mat<eTb> > planc::nmflib<T, eT>::oinmf_project(std::vector<std::shared_ptr<_Tp> >, const arma::mat&, std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&) [with T = planc::H5SpMat; eT = double; arma::mat = arma::Mat<double>; arma::uword = long long unsigned int]'
230 | solver.setW(Winit, false);
| ~~~~~~~~~~~^~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:7:1: required from here
18 | template std::vector<arma::Mat<double>> planc::nmflib<T, double>::oinmf_project(std::vector<std::shared_ptr<T>> matPtrVec, const arma::mat &Winit, std::vector<std::shared_ptr<T>> matPtrVecNew, const arma::uword &k, const int& nCores, const double &lambda); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp:281:57: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const long long unsigned int'} and 'int' [-Wsign-compare]
281 | if (Winit.n_cols != this->k || Winit.n_rows != this->m) {
| ~~~~~~~~~~~~~^~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp: In instantiation of 'void planc::symmEmbeddedNMFDriver<T>::parseParams(const planc::internalSymmParams<T>&) [with T = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp:86:19: required from 'planc::symmEmbeddedNMFDriver<T>::symmEmbeddedNMFDriver(planc::internalSymmParams<T>) [with T = arma::Mat<double>]'
86 | this->parseParams(pc);
| ~~~~~~^~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:44:31: required from 'static planc::nmfOutput<eT> planc::nmflib<T, eT>::symNMF(const T&, const arma::uword&, const arma::uword&, const double&, const std::string&, const int&, const arma::Mat<eTb>&) [with T = arma::Mat<double>; eT = double; arma::uword = long long unsigned int; std::string = std::__cxx11::basic_string<char>]'
44 | symmEmbeddedNMFDriver nmfRunner(options);
| ^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_types.inc:1:1: required from here
8 | template planc::nmfOutput<double> planc::nmflib<T, double>::symNMF(const T&x, const arma::uword&k, const arma::uword&niter, const double& lambda, const std::string&algo, const int&nCores, const arma::Mat<double>&Hinit);
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp:80:27: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
80 | if (this->m_k >= this->A.n_rows) std::throw_with_nested(
| ~~~~~~~~~~^~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp: In instantiation of 'void planc::symmEmbeddedNMFDriver<T>::parseParams(const planc::internalSymmParams<T>&) [with T = arma::SpMat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp:86:19: required from 'planc::symmEmbeddedNMFDriver<T>::symmEmbeddedNMFDriver(planc::internalSymmParams<T>) [with T = arma::SpMat<double>]'
86 | this->parseParams(pc);
| ~~~~~~^~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:44:31: required from 'static planc::nmfOutput<eT> planc::nmflib<T, eT>::symNMF(const T&, const arma::uword&, const arma::uword&, const double&, const std::string&, const int&, const arma::Mat<eTb>&) [with T = arma::SpMat<double>; eT = double; arma::uword = long long unsigned int; std::string = std::__cxx11::basic_string<char>]'
44 | symmEmbeddedNMFDriver nmfRunner(options);
| ^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_types.inc:3:1: required from here
8 | template planc::nmfOutput<double> planc::nmflib<T, double>::symNMF(const T&x, const arma::uword&k, const arma::uword&niter, const double& lambda, const std::string&algo, const int&nCores, const arma::Mat<double>&Hinit);
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp:80:27: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
80 | if (this->m_k >= this->A.n_rows) std::throw_with_nested(
| ~~~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:6:
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp: In instantiation of 'void planc::UINMF<T>::solveU(int) [with T = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:364:23: required from 'void planc::UINMF<T>::optimizeUANLS(arma::uword, bool, const int&) [with T = arma::Mat<double>; arma::uword = long long unsigned int]'
364 | this->solveU(ncores);
| ~~~~~~^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:116:29: required from 'static planc::uinmfOutput<eT> planc::nmflib<T, eT>::uinmf(const std::vector<std::shared_ptr<_Tp> >&, const std::vector<std::shared_ptr<_Tp> >&, std::vector<int, std::allocator<int> >, const arma::uword&, const int&, const arma::vec&, const arma::uword&, const bool&) [with T = arma::Mat<double>; eT = double; arma::uword = long long unsigned int; arma::vec = arma::Col<double>]'
116 | solver.optimizeUANLS(niter, verbose, nCores);
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:1:1: required from here
19 | template planc::uinmfOutput<double> planc::nmflib<T, double>::uinmf(const std::vector<std::shared_ptr<T>> &matPtrVec, const std::vector<std::shared_ptr<T>> &unsharedPtrVec, std::vector<int> whichUnshared, const arma::uword &k, const int& nCores, const arma::vec &lambda, const arma::uword &niter, const bool &verbose);
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:237:55: warning: comparison of integer expressions of different signedness: 'int' and 'long long unsigned int' [-Wsign-compare]
237 | if (numChunks * this->INMF_CHUNK_SIZE < this->u[uidx]) numChunks++;
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:242:33: warning: comparison of integer expressions of different signedness: 'int' and 'long long unsigned int' [-Wsign-compare]
242 | if (spanEnd > this->u[uidx] - 1) spanEnd = this->u[uidx] - 1;
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp: In instantiation of 'void planc::UINMF<T>::solveW(int) [with T = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:365:23: required from 'void planc::UINMF<T>::optimizeUANLS(arma::uword, bool, const int&) [with T = arma::Mat<double>; arma::uword = long long unsigned int]'
365 | this->solveW(ncores);
| ~~~~~~^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:116:29: required from 'static planc::uinmfOutput<eT> planc::nmflib<T, eT>::uinmf(const std::vector<std::shared_ptr<_Tp> >&, const std::vector<std::shared_ptr<_Tp> >&, std::vector<int, std::allocator<int> >, const arma::uword&, const int&, const arma::vec&, const arma::uword&, const bool&) [with T = arma::Mat<double>; eT = double; arma::uword = long long unsigned int; arma::vec = arma::Col<double>]'
116 | solver.optimizeUANLS(niter, verbose, nCores);
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:1:1: required from here
19 | template planc::uinmfOutput<double> planc::nmflib<T, double>::uinmf(const std::vector<std::shared_ptr<T>> &matPtrVec, const std::vector<std::shared_ptr<T>> &unsharedPtrVec, std::vector<int> whichUnshared, const arma::uword &k, const int& nCores, const arma::vec &lambda, const arma::uword &niter, const bool &verbose);
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:289:35: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'long long unsigned int'} [-Wsign-compare]
289 | for (int j = 0; j < this->nDatasets; ++j) {
| ~~^~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp: In instantiation of 'void planc::UINMF<T>::solveU(int) [with T = arma::SpMat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:364:23: required from 'void planc::UINMF<T>::optimizeUANLS(arma::uword, bool, const int&) [with T = arma::SpMat<double>; arma::uword = long long unsigned int]'
364 | this->solveU(ncores);
| ~~~~~~^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:116:29: required from 'static planc::uinmfOutput<eT> planc::nmflib<T, eT>::uinmf(const std::vector<std::shared_ptr<_Tp> >&, const std::vector<std::shared_ptr<_Tp> >&, std::vector<int, std::allocator<int> >, const arma::uword&, const int&, const arma::vec&, const arma::uword&, const bool&) [with T = arma::SpMat<double>; eT = double; arma::uword = long long unsigned int; arma::vec = arma::Col<double>]'
116 | solver.optimizeUANLS(niter, verbose, nCores);
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:3:1: required from here
19 | template planc::uinmfOutput<double> planc::nmflib<T, double>::uinmf(const std::vector<std::shared_ptr<T>> &matPtrVec, const std::vector<std::shared_ptr<T>> &unsharedPtrVec, std::vector<int> whichUnshared, const arma::uword &k, const int& nCores, const arma::vec &lambda, const arma::uword &niter, const bool &verbose);
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:237:55: warning: comparison of integer expressions of different signedness: 'int' and 'long long unsigned int' [-Wsign-compare]
237 | if (numChunks * this->INMF_CHUNK_SIZE < this->u[uidx]) numChunks++;
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:242:33: warning: comparison of integer expressions of different signedness: 'int' and 'long long unsigned int' [-Wsign-compare]
242 | if (spanEnd > this->u[uidx] - 1) spanEnd = this->u[uidx] - 1;
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp: In instantiation of 'void planc::UINMF<T>::solveW(int) [with T = arma::SpMat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:365:23: required from 'void planc::UINMF<T>::optimizeUANLS(arma::uword, bool, const int&) [with T = arma::SpMat<double>; arma::uword = long long unsigned int]'
365 | this->solveW(ncores);
| ~~~~~~^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:116:29: required from 'static planc::uinmfOutput<eT> planc::nmflib<T, eT>::uinmf(const std::vector<std::shared_ptr<_Tp> >&, const std::vector<std::shared_ptr<_Tp> >&, std::vector<int, std::allocator<int> >, const arma::uword&, const int&, const arma::vec&, const arma::uword&, const bool&) [with T = arma::SpMat<double>; eT = double; arma::uword = long long unsigned int; arma::vec = arma::Col<double>]'
116 | solver.optimizeUANLS(niter, verbose, nCores);
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:3:1: required from here
19 | template planc::uinmfOutput<double> planc::nmflib<T, double>::uinmf(const std::vector<std::shared_ptr<T>> &matPtrVec, const std::vector<std::shared_ptr<T>> &unsharedPtrVec, std::vector<int> whichUnshared, const arma::uword &k, const int& nCores, const arma::vec &lambda, const arma::uword &niter, const bool &verbose);
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:289:35: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'long long unsigned int'} [-Wsign-compare]
289 | for (int j = 0; j < this->nDatasets; ++j) {
| ~~^~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp: In instantiation of 'void planc::UINMF<T>::solveU(int) [with T = planc::H5Mat]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:364:23: required from 'void planc::UINMF<T>::optimizeUANLS(arma::uword, bool, const int&) [with T = planc::H5Mat; arma::uword = long long unsigned int]'
364 | this->solveU(ncores);
| ~~~~~~^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:116:29: required from 'static planc::uinmfOutput<eT> planc::nmflib<T, eT>::uinmf(const std::vector<std::shared_ptr<_Tp> >&, const std::vector<std::shared_ptr<_Tp> >&, std::vector<int, std::allocator<int> >, const arma::uword&, const int&, const arma::vec&, const arma::uword&, const bool&) [with T = planc::H5Mat; eT = double; arma::uword = long long unsigned int; arma::vec = arma::Col<double>]'
116 | solver.optimizeUANLS(niter, verbose, nCores);
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:5:1: required from here
19 | template planc::uinmfOutput<double> planc::nmflib<T, double>::uinmf(const std::vector<std::shared_ptr<T>> &matPtrVec, const std::vector<std::shared_ptr<T>> &unsharedPtrVec, std::vector<int> whichUnshared, const arma::uword &k, const int& nCores, const arma::vec &lambda, const arma::uword &niter, const bool &verbose);
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:237:55: warning: comparison of integer expressions of different signedness: 'int' and 'long long unsigned int' [-Wsign-compare]
237 | if (numChunks * this->INMF_CHUNK_SIZE < this->u[uidx]) numChunks++;
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:242:33: warning: comparison of integer expressions of different signedness: 'int' and 'long long unsigned int' [-Wsign-compare]
242 | if (spanEnd > this->u[uidx] - 1) spanEnd = this->u[uidx] - 1;
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp: In instantiation of 'void planc::UINMF<T>::solveW(int) [with T = planc::H5Mat]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:365:23: required from 'void planc::UINMF<T>::optimizeUANLS(arma::uword, bool, const int&) [with T = planc::H5Mat; arma::uword = long long unsigned int]'
365 | this->solveW(ncores);
| ~~~~~~^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:116:29: required from 'static planc::uinmfOutput<eT> planc::nmflib<T, eT>::uinmf(const std::vector<std::shared_ptr<_Tp> >&, const std::vector<std::shared_ptr<_Tp> >&, std::vector<int, std::allocator<int> >, const arma::uword&, const int&, const arma::vec&, const arma::uword&, const bool&) [with T = planc::H5Mat; eT = double; arma::uword = long long unsigned int; arma::vec = arma::Col<double>]'
116 | solver.optimizeUANLS(niter, verbose, nCores);
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:5:1: required from here
19 | template planc::uinmfOutput<double> planc::nmflib<T, double>::uinmf(const std::vector<std::shared_ptr<T>> &matPtrVec, const std::vector<std::shared_ptr<T>> &unsharedPtrVec, std::vector<int> whichUnshared, const arma::uword &k, const int& nCores, const arma::vec &lambda, const arma::uword &niter, const bool &verbose);
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:289:35: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'long long unsigned int'} [-Wsign-compare]
289 | for (int j = 0; j < this->nDatasets; ++j) {
| ~~^~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp: In instantiation of 'void planc::UINMF<T>::solveU(int) [with T = planc::H5SpMat]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:364:23: required from 'void planc::UINMF<T>::optimizeUANLS(arma::uword, bool, const int&) [with T = planc::H5SpMat; arma::uword = long long unsigned int]'
364 | this->solveU(ncores);
| ~~~~~~^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:116:29: required from 'static planc::uinmfOutput<eT> planc::nmflib<T, eT>::uinmf(const std::vector<std::shared_ptr<_Tp> >&, const std::vector<std::shared_ptr<_Tp> >&, std::vector<int, std::allocator<int> >, const arma::uword&, const int&, const arma::vec&, const arma::uword&, const bool&) [with T = planc::H5SpMat; eT = double; arma::uword = long long unsigned int; arma::vec = arma::Col<double>]'
116 | solver.optimizeUANLS(niter, verbose, nCores);
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:7:1: required from here
19 | template planc::uinmfOutput<double> planc::nmflib<T, double>::uinmf(const std::vector<std::shared_ptr<T>> &matPtrVec, const std::vector<std::shared_ptr<T>> &unsharedPtrVec, std::vector<int> whichUnshared, const arma::uword &k, const int& nCores, const arma::vec &lambda, const arma::uword &niter, const bool &verbose);
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:237:55: warning: comparison of integer expressions of different signedness: 'int' and 'long long unsigned int' [-Wsign-compare]
237 | if (numChunks * this->INMF_CHUNK_SIZE < this->u[uidx]) numChunks++;
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:242:33: warning: comparison of integer expressions of different signedness: 'int' and 'long long unsigned int' [-Wsign-compare]
242 | if (spanEnd > this->u[uidx] - 1) spanEnd = this->u[uidx] - 1;
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp: In instantiation of 'void planc::UINMF<T>::solveW(int) [with T = planc::H5SpMat]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:365:23: required from 'void planc::UINMF<T>::optimizeUANLS(arma::uword, bool, const int&) [with T = planc::H5SpMat; arma::uword = long long unsigned int]'
365 | this->solveW(ncores);
| ~~~~~~^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:116:29: required from 'static planc::uinmfOutput<eT> planc::nmflib<T, eT>::uinmf(const std::vector<std::shared_ptr<_Tp> >&, const std::vector<std::shared_ptr<_Tp> >&, std::vector<int, std::allocator<int> >, const arma::uword&, const int&, const arma::vec&, const arma::uword&, const bool&) [with T = planc::H5SpMat; eT = double; arma::uword = long long unsigned int; arma::vec = arma::Col<double>]'
116 | solver.optimizeUANLS(niter, verbose, nCores);
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:7:1: required from here
19 | template planc::uinmfOutput<double> planc::nmflib<T, double>::uinmf(const std::vector<std::shared_ptr<T>> &matPtrVec, const std::vector<std::shared_ptr<T>> &unsharedPtrVec, std::vector<int> whichUnshared, const arma::uword &k, const int& nCores, const arma::vec &lambda, const arma::uword &niter, const bool &verbose);
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/uinmf.hpp:289:35: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'long long unsigned int'} [-Wsign-compare]
289 | for (int j = 0; j < this->nDatasets; ++j) {
| ~~^~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp: In instantiation of 'void planc::INMF<T>::setV(const std::vector<arma::Mat<double> >&, bool) [with T = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp:158:19: required from 'planc::INMF<T>::INMF(std::vector<std::shared_ptr<_Tp> >, arma::uword, double, const std::vector<arma::Mat<double> >&, const arma::mat&, bool) [with T = arma::Mat<double>; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]'
158 | this->setV(VinitList);
| ~~~~~~^~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp:233:116: required from 'planc::BPPINMF<T>::BPPINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double, std::vector<arma::Mat<double> >, std::vector<arma::Mat<double> >, arma::mat) [with T = arma::Mat<double>; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]'
233 | std::vector<arma::mat> VinitList, arma::mat Winit) : INMF<T>(Ei, k, lambda, VinitList, Winit, false) {
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:81:20: required from 'static planc::inmfOutput<eT> planc::nmflib<T, eT>::bppinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const double&, const arma::uword&, const bool&, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, const arma::mat&, const int&) [with T = arma::Mat<double>; eT = double; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]'
81 | BPPINMF<T> solver(objectList, k, lambda, HinitList, VinitList, Winit);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:1:1: required from here
14 | template planc::inmfOutput<double> planc::nmflib<T, double>::bppinmf(std::vector<std::shared_ptr<T>> objectlist, const arma::uword &k, const double &lambda, const arma::uword &niter, const bool &verbose, const std::vector<arma::mat> &HinitList, const std::vector<arma::mat> &VinitList, const arma::mat &Winit, const int &nCores); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp:239:67: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const long long unsigned int'} and 'int' [-Wsign-compare]
239 | if (Vinit[i].n_cols != this->k || Vinit[i].n_rows != this->m) {
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'void planc::ONLINEINMF<T1>::updateW() [with T1 = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:479:27: required from 'void planc::ONLINEINMF<T1>::solveHALS(arma::uword, arma::uword, arma::uword, bool, const int&) [with T1 = arma::Mat<double>; arma::uword = long long unsigned int]'
479 | this->updateW();
| ~~~~~~^~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:751:19: required from 'void planc::ONLINEINMF<T1>::runOnlineINMF(arma::uword, arma::uword, arma::uword, arma::uword, bool, const int&) [with T1 = arma::Mat<double>; arma::uword = long long unsigned int]'
751 | this->solveHALS(minibatchSize, inputmaxEpochs, maxHALSIter, verbose, ncores);
| ~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:147:29: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = arma::Mat<double>; eT = double; arma::uword = long long unsigned int]'
147 | solver.runOnlineINMF(minibatchSize, maxEpoch, maxHALSIter, permuteChunkSize, verbose, nCores);
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:1:1: required from here
16 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const arma::uword &k, const int &nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:371:43: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
371 | for (arma::uword i = 0; i < this->m; i++) {
| ~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'void planc::ONLINEINMF<T1>::updateV() [with T1 = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:480:27: required from 'void planc::ONLINEINMF<T1>::solveHALS(arma::uword, arma::uword, arma::uword, bool, const int&) [with T1 = arma::Mat<double>; arma::uword = long long unsigned int]'
480 | this->updateV();
| ~~~~~~^~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:751:19: required from 'void planc::ONLINEINMF<T1>::runOnlineINMF(arma::uword, arma::uword, arma::uword, arma::uword, bool, const int&) [with T1 = arma::Mat<double>; arma::uword = long long unsigned int]'
751 | this->solveHALS(minibatchSize, inputmaxEpochs, maxHALSIter, verbose, ncores);
| ~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:147:29: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = arma::Mat<double>; eT = double; arma::uword = long long unsigned int]'
147 | solver.runOnlineINMF(minibatchSize, maxEpoch, maxHALSIter, permuteChunkSize, verbose, nCores);
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:1:1: required from here
16 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const arma::uword &k, const int &nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:395:47: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
395 | for (arma::uword k = 0; k < this->m; k++) {
| ~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp: In instantiation of 'void planc::INMF<T>::setV(const std::vector<arma::Mat<double> >&, bool) [with T = arma::SpMat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp:158:19: required from 'planc::INMF<T>::INMF(std::vector<std::shared_ptr<_Tp> >, arma::uword, double, const std::vector<arma::Mat<double> >&, const arma::mat&, bool) [with T = arma::SpMat<double>; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]'
158 | this->setV(VinitList);
| ~~~~~~^~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp:233:116: required from 'planc::BPPINMF<T>::BPPINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double, std::vector<arma::Mat<double> >, std::vector<arma::Mat<double> >, arma::mat) [with T = arma::SpMat<double>; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]'
233 | std::vector<arma::mat> VinitList, arma::mat Winit) : INMF<T>(Ei, k, lambda, VinitList, Winit, false) {
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:81:20: required from 'static planc::inmfOutput<eT> planc::nmflib<T, eT>::bppinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const double&, const arma::uword&, const bool&, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, const arma::mat&, const int&) [with T = arma::SpMat<double>; eT = double; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]'
81 | BPPINMF<T> solver(objectList, k, lambda, HinitList, VinitList, Winit);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:3:1: required from here
14 | template planc::inmfOutput<double> planc::nmflib<T, double>::bppinmf(std::vector<std::shared_ptr<T>> objectlist, const arma::uword &k, const double &lambda, const arma::uword &niter, const bool &verbose, const std::vector<arma::mat> &HinitList, const std::vector<arma::mat> &VinitList, const arma::mat &Winit, const int &nCores); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp:239:67: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const long long unsigned int'} and 'int' [-Wsign-compare]
239 | if (Vinit[i].n_cols != this->k || Vinit[i].n_rows != this->m) {
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'void planc::ONLINEINMF<T1>::updateW() [with T1 = arma::SpMat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:479:27: required from 'void planc::ONLINEINMF<T1>::solveHALS(arma::uword, arma::uword, arma::uword, bool, const int&) [with T1 = arma::SpMat<double>; arma::uword = long long unsigned int]'
479 | this->updateW();
| ~~~~~~^~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:751:19: required from 'void planc::ONLINEINMF<T1>::runOnlineINMF(arma::uword, arma::uword, arma::uword, arma::uword, bool, const int&) [with T1 = arma::SpMat<double>; arma::uword = long long unsigned int]'
751 | this->solveHALS(minibatchSize, inputmaxEpochs, maxHALSIter, verbose, ncores);
| ~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:147:29: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = arma::SpMat<double>; eT = double; arma::uword = long long unsigned int]'
147 | solver.runOnlineINMF(minibatchSize, maxEpoch, maxHALSIter, permuteChunkSize, verbose, nCores);
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:3:1: required from here
16 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const arma::uword &k, const int &nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:371:43: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
371 | for (arma::uword i = 0; i < this->m; i++) {
| ~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'void planc::ONLINEINMF<T1>::updateV() [with T1 = arma::SpMat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:480:27: required from 'void planc::ONLINEINMF<T1>::solveHALS(arma::uword, arma::uword, arma::uword, bool, const int&) [with T1 = arma::SpMat<double>; arma::uword = long long unsigned int]'
480 | this->updateV();
| ~~~~~~^~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:751:19: required from 'void planc::ONLINEINMF<T1>::runOnlineINMF(arma::uword, arma::uword, arma::uword, arma::uword, bool, const int&) [with T1 = arma::SpMat<double>; arma::uword = long long unsigned int]'
751 | this->solveHALS(minibatchSize, inputmaxEpochs, maxHALSIter, verbose, ncores);
| ~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:147:29: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = arma::SpMat<double>; eT = double; arma::uword = long long unsigned int]'
147 | solver.runOnlineINMF(minibatchSize, maxEpoch, maxHALSIter, permuteChunkSize, verbose, nCores);
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:3:1: required from here
16 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const arma::uword &k, const int &nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:395:47: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
395 | for (arma::uword k = 0; k < this->m; k++) {
| ~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp: In instantiation of 'void planc::INMF<T>::setV(const std::vector<arma::Mat<double> >&, bool) [with T = planc::H5Mat]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp:158:19: required from 'planc::INMF<T>::INMF(std::vector<std::shared_ptr<_Tp> >, arma::uword, double, const std::vector<arma::Mat<double> >&, const arma::mat&, bool) [with T = planc::H5Mat; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]'
158 | this->setV(VinitList);
| ~~~~~~^~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp:233:116: required from 'planc::BPPINMF<T>::BPPINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double, std::vector<arma::Mat<double> >, std::vector<arma::Mat<double> >, arma::mat) [with T = planc::H5Mat; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]'
233 | std::vector<arma::mat> VinitList, arma::mat Winit) : INMF<T>(Ei, k, lambda, VinitList, Winit, false) {
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:81:20: required from 'static planc::inmfOutput<eT> planc::nmflib<T, eT>::bppinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const double&, const arma::uword&, const bool&, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, const arma::mat&, const int&) [with T = planc::H5Mat; eT = double; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]'
81 | BPPINMF<T> solver(objectList, k, lambda, HinitList, VinitList, Winit);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:5:1: required from here
14 | template planc::inmfOutput<double> planc::nmflib<T, double>::bppinmf(std::vector<std::shared_ptr<T>> objectlist, const arma::uword &k, const double &lambda, const arma::uword &niter, const bool &verbose, const std::vector<arma::mat> &HinitList, const std::vector<arma::mat> &VinitList, const arma::mat &Winit, const int &nCores); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp:239:67: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const long long unsigned int'} and 'int' [-Wsign-compare]
239 | if (Vinit[i].n_cols != this->k || Vinit[i].n_rows != this->m) {
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'void planc::ONLINEINMF<T1>::updateW() [with T1 = planc::H5Mat]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:479:27: required from 'void planc::ONLINEINMF<T1>::solveHALS(arma::uword, arma::uword, arma::uword, bool, const int&) [with T1 = planc::H5Mat; arma::uword = long long unsigned int]'
479 | this->updateW();
| ~~~~~~^~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:751:19: required from 'void planc::ONLINEINMF<T1>::runOnlineINMF(arma::uword, arma::uword, arma::uword, arma::uword, bool, const int&) [with T1 = planc::H5Mat; arma::uword = long long unsigned int]'
751 | this->solveHALS(minibatchSize, inputmaxEpochs, maxHALSIter, verbose, ncores);
| ~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:147:29: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = planc::H5Mat; eT = double; arma::uword = long long unsigned int]'
147 | solver.runOnlineINMF(minibatchSize, maxEpoch, maxHALSIter, permuteChunkSize, verbose, nCores);
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:5:1: required from here
16 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const arma::uword &k, const int &nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:371:43: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
371 | for (arma::uword i = 0; i < this->m; i++) {
| ~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'void planc::ONLINEINMF<T1>::updateV() [with T1 = planc::H5Mat]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:480:27: required from 'void planc::ONLINEINMF<T1>::solveHALS(arma::uword, arma::uword, arma::uword, bool, const int&) [with T1 = planc::H5Mat; arma::uword = long long unsigned int]'
480 | this->updateV();
| ~~~~~~^~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:751:19: required from 'void planc::ONLINEINMF<T1>::runOnlineINMF(arma::uword, arma::uword, arma::uword, arma::uword, bool, const int&) [with T1 = planc::H5Mat; arma::uword = long long unsigned int]'
751 | this->solveHALS(minibatchSize, inputmaxEpochs, maxHALSIter, verbose, ncores);
| ~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:147:29: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = planc::H5Mat; eT = double; arma::uword = long long unsigned int]'
147 | solver.runOnlineINMF(minibatchSize, maxEpoch, maxHALSIter, permuteChunkSize, verbose, nCores);
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:5:1: required from here
16 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const arma::uword &k, const int &nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:395:47: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
395 | for (arma::uword k = 0; k < this->m; k++) {
| ~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp: In instantiation of 'void planc::INMF<T>::setV(const std::vector<arma::Mat<double> >&, bool) [with T = planc::H5SpMat]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp:158:19: required from 'planc::INMF<T>::INMF(std::vector<std::shared_ptr<_Tp> >, arma::uword, double, const std::vector<arma::Mat<double> >&, const arma::mat&, bool) [with T = planc::H5SpMat; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]'
158 | this->setV(VinitList);
| ~~~~~~^~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppinmf.hpp:233:116: required from 'planc::BPPINMF<T>::BPPINMF(std::vector<std::shared_ptr<_Tp> >&, arma::uword, double, std::vector<arma::Mat<double> >, std::vector<arma::Mat<double> >, arma::mat) [with T = planc::H5SpMat; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]'
233 | std::vector<arma::mat> VinitList, arma::mat Winit) : INMF<T>(Ei, k, lambda, VinitList, Winit, false) {
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:81:20: required from 'static planc::inmfOutput<eT> planc::nmflib<T, eT>::bppinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const double&, const arma::uword&, const bool&, const std::vector<arma::Mat<double> >&, const std::vector<arma::Mat<double> >&, const arma::mat&, const int&) [with T = planc::H5SpMat; eT = double; arma::uword = long long unsigned int; arma::mat = arma::Mat<double>]'
81 | BPPINMF<T> solver(objectList, k, lambda, HinitList, VinitList, Winit);
| ^~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:7:1: required from here
14 | template planc::inmfOutput<double> planc::nmflib<T, double>::bppinmf(std::vector<std::shared_ptr<T>> objectlist, const arma::uword &k, const double &lambda, const arma::uword &niter, const bool &verbose, const std::vector<arma::mat> &HinitList, const std::vector<arma::mat> &VinitList, const arma::mat &Winit, const int &nCores); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/inmf.hpp:239:67: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const long long unsigned int'} and 'int' [-Wsign-compare]
239 | if (Vinit[i].n_cols != this->k || Vinit[i].n_rows != this->m) {
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'void planc::ONLINEINMF<T1>::updateW() [with T1 = planc::H5SpMat]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:479:27: required from 'void planc::ONLINEINMF<T1>::solveHALS(arma::uword, arma::uword, arma::uword, bool, const int&) [with T1 = planc::H5SpMat; arma::uword = long long unsigned int]'
479 | this->updateW();
| ~~~~~~^~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:751:19: required from 'void planc::ONLINEINMF<T1>::runOnlineINMF(arma::uword, arma::uword, arma::uword, arma::uword, bool, const int&) [with T1 = planc::H5SpMat; arma::uword = long long unsigned int]'
751 | this->solveHALS(minibatchSize, inputmaxEpochs, maxHALSIter, verbose, ncores);
| ~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:147:29: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = planc::H5SpMat; eT = double; arma::uword = long long unsigned int]'
147 | solver.runOnlineINMF(minibatchSize, maxEpoch, maxHALSIter, permuteChunkSize, verbose, nCores);
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:7:1: required from here
16 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const arma::uword &k, const int &nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:371:43: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
371 | for (arma::uword i = 0; i < this->m; i++) {
| ~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp: In instantiation of 'void planc::ONLINEINMF<T1>::updateV() [with T1 = planc::H5SpMat]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:480:27: required from 'void planc::ONLINEINMF<T1>::solveHALS(arma::uword, arma::uword, arma::uword, bool, const int&) [with T1 = planc::H5SpMat; arma::uword = long long unsigned int]'
480 | this->updateV();
| ~~~~~~^~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:751:19: required from 'void planc::ONLINEINMF<T1>::runOnlineINMF(arma::uword, arma::uword, arma::uword, arma::uword, bool, const int&) [with T1 = planc::H5SpMat; arma::uword = long long unsigned int]'
751 | this->solveHALS(minibatchSize, inputmaxEpochs, maxHALSIter, verbose, ncores);
| ~~~~~~^~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:147:29: required from 'static planc::oinmfOutput<eT> planc::nmflib<T, eT>::oinmf(std::vector<std::shared_ptr<_Tp> >, const arma::uword&, const int&, const double&, const arma::uword&, const arma::uword&, const arma::uword&, const arma::uword&, const bool&) [with T = planc::H5SpMat; eT = double; arma::uword = long long unsigned int]'
147 | solver.runOnlineINMF(minibatchSize, maxEpoch, maxHALSIter, permuteChunkSize, verbose, nCores);
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/inmf_types.inc:7:1: required from here
16 | template planc::oinmfOutput<double> planc::nmflib<T, double>::oinmf(std::vector<std::shared_ptr<T>> matPtrVec, const arma::uword &k, const int &nCores, const double &lambda, const arma::uword &maxEpoch, const arma::uword &minibatchSize, const arma::uword &maxHALSIter, const arma::uword &permuteChunkSize, const bool &verbose); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/onlineinmf.hpp:395:47: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
395 | for (arma::uword k = 0; k < this->m; k++) {
| ~~^~~~~~~~~
In file included from D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/NMFDriver.hpp:9,
from D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp:7:
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.hpp: In instantiation of 'void planc::BPPNMF<T>::updateOtherGivenOneMultipleRHS(const T&, const arma::mat&, char, arma::mat*, arma::fvec) [with T = arma::Mat<double>; arma::mat = arma::Mat<double>; arma::fvec = arma::Col<float>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.hpp:129:17: required from 'void planc::BPPNMF<T>::commonSolve() [with T = arma::Mat<double>]'
129 | updateOtherGivenOneMultipleRHS(this->At, this->H, 'W', &(this->W),
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.hpp:287:19: required from 'void planc::BPPNMF<T>::computeNMF() [with T = arma::Mat<double>]'
287 | this->commonSolve();
| ~~~~~~^~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/NMFDriver.hpp:382:32: required from 'void planc::NMFDriver<T>::CallNMF() [with NMFTYPE = planc::BPPNMF<arma::Mat<double> >; T = arma::Mat<double>]'
382 | nmfAlgorithm.computeNMF();
| ~~~~~~~~~~~~~~~~~~~~~~~^~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/NMFDriver.hpp:315:39: required from 'void planc::NMFDriver<T>::callNMF() [with T = arma::Mat<double>]'
315 | CallNMF<BPPNMF<T>>();
| ~~~~~~~~~~~~~~~~~~^~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:245:22: required from 'static int planc::nmflib<T, eT>::runNMF(const planc::params&) [with T = arma::Mat<double>; eT = double]'
245 | myNMF.callNMF();
| ~~~~~~~~~~~~~^~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_types.inc:1:1: required from here
6 | template int planc::nmflib<T, double>::runNMF(const planc::params& opts); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.hpp:64:33: warning: comparison of integer expressions of different signedness: 'int' and 'long long unsigned int' [-Wsign-compare]
64 | if (spanEnd > input.n_cols - 1) {
| ~~~~~~~~^~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.hpp:91:54: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::unique_ptr<BPPNNLS<arma::Mat<double>, arma::Col<double> > > >::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
91 | for (int i = 0; i < subproblems.size(); i++) {
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.hpp:105:50: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::unique_ptr<BPPNNLS<arma::Mat<double>, arma::Col<double> > > >::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
105 | for (int i = 0; i < subproblems.size(); i++) {
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.hpp: In instantiation of 'void planc::BPPNMF<T>::updateOtherGivenOneMultipleRHS(const T&, const arma::mat&, char, arma::mat*, arma::fvec) [with T = arma::SpMat<double>; arma::mat = arma::Mat<double>; arma::fvec = arma::Col<float>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.hpp:129:17: required from 'void planc::BPPNMF<T>::commonSolve() [with T = arma::SpMat<double>]'
129 | updateOtherGivenOneMultipleRHS(this->At, this->H, 'W', &(this->W),
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.hpp:287:19: required from 'void planc::BPPNMF<T>::computeNMF() [with T = arma::SpMat<double>]'
287 | this->commonSolve();
| ~~~~~~^~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/NMFDriver.hpp:443:32: required from 'void planc::NMFDriver<T>::CallNMF() [with NMFTYPE = planc::BPPNMF<arma::SpMat<double> >; T = arma::SpMat<double>]'
443 | nmfAlgorithm.computeNMF();
| ~~~~~~~~~~~~~~~~~~~~~~~^~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/NMFDriver.hpp:315:39: required from 'void planc::NMFDriver<T>::callNMF() [with T = arma::SpMat<double>]'
315 | CallNMF<BPPNMF<T>>();
| ~~~~~~~~~~~~~~~~~~^~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_lib.inl:245:22: required from 'static int planc::nmflib<T, eT>::runNMF(const planc::params&) [with T = arma::SpMat<double>; eT = double]'
245 | myNMF.callNMF();
| ~~~~~~~~~~~~~^~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/nmf_types.inc:3:1: required from here
6 | template int planc::nmflib<T, double>::runNMF(const planc::params& opts); \
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.hpp:64:33: warning: comparison of integer expressions of different signedness: 'int' and 'long long unsigned int' [-Wsign-compare]
64 | if (spanEnd > input.n_cols - 1) {
| ~~~~~~~~^~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.hpp:91:54: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::unique_ptr<BPPNNLS<arma::Mat<double>, arma::Col<double> > > >::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
91 | for (int i = 0; i < subproblems.size(); i++) {
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.hpp:105:50: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::unique_ptr<BPPNNLS<arma::Mat<double>, arma::Col<double> > > >::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
105 | for (int i = 0; i < subproblems.size(); i++) {
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp: In instantiation of 'void planc::EmbeddedNMFDriver<T>::loadWHInit(arma::mat&, arma::mat&) [with T = arma::SpMat<double>; arma::mat = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp:24:14: required from here
24 | void loadWHInit(arma::mat&W, arma::mat&H) override {
| ^~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp:27:55: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const long long unsigned int'} and 'int' [-Wsign-compare]
27 | if (W.n_rows != this->m_m || W.n_cols != this->m_k) {
| ~~~~~~~~~^~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp:38:55: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const long long unsigned int'} and 'int' [-Wsign-compare]
38 | if (H.n_rows != this->m_n || H.n_cols != this->m_k) {
| ~~~~~~~~~^~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp: In instantiation of 'void planc::EmbeddedNMFDriver<T>::loadWHInit(arma::mat&, arma::mat&) [with T = arma::Mat<double>; arma::mat = arma::Mat<double>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp:24:14: required from here
24 | void loadWHInit(arma::mat&W, arma::mat&H) override {
| ^~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp:27:55: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const long long unsigned int'} and 'int' [-Wsign-compare]
27 | if (W.n_rows != this->m_m || W.n_cols != this->m_k) {
| ~~~~~~~~~^~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/EmbeddedNMFDriver.hpp:38:55: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const long long unsigned int'} and 'int' [-Wsign-compare]
38 | if (H.n_rows != this->m_n || H.n_cols != this->m_k) {
| ~~~~~~~~~^~~~~~~~~~~~
[ 76%] Building CXX object nmf/CMakeFiles/nmflib.dir/bppnmf.cpp.obj
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/nmf && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/g++.exe -std=gnu++17 -DUSING_R -D_GNU_SOURCE -D_POSIX_C_SOURCE=200809L -Dnmflib_EXPORTS @CMakeFiles/nmflib.dir/includes_CXX.rsp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -O2 -g -DNDEBUG -fno-keep-inline-dllexport -fopenmp -funsafe-math-optimizations -ffinite-math-only -fno-trapping-math -fno-math-errno -fno-signed-zeros -freciprocal-math -mavx -mpopcnt -MD -MT nmf/CMakeFiles/nmflib.dir/bppnmf.cpp.obj -MF CMakeFiles/nmflib.dir/bppnmf.cpp.obj.d -o CMakeFiles/nmflib.dir/bppnmf.cpp.obj -c D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.cpp
In file included from D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.cpp:4:
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.hpp: In instantiation of 'void planc::BPPNMF<T>::updateOtherGivenOneMultipleRHS(const T&, const arma::mat&, char, arma::mat*, arma::fvec) [with T = arma::SpMat<double>; arma::mat = arma::Mat<double>; arma::fvec = arma::Col<float>]':
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.hpp:129:17: required from 'void planc::BPPNMF<T>::commonSolve() [with T = arma::SpMat<double>]'
129 | updateOtherGivenOneMultipleRHS(this->At, this->H, 'W', &(this->W),
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.cpp:29:22: required from here
29 | this->commonSolve();
| ~~~~~~~~~~~~~~~~~^~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.hpp:64:33: warning: comparison of integer expressions of different signedness: 'int' and 'long long unsigned int' [-Wsign-compare]
64 | if (spanEnd > input.n_cols - 1) {
| ~~~~~~~~^~~~~~~~~~~~~~~~~~
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.hpp:91:54: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::unique_ptr<BPPNNLS<arma::Mat<double>, arma::Col<double> > > >::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
91 | for (int i = 0; i < subproblems.size(); i++) {
| ^
D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nmf/bppnmf.hpp:105:50: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::unique_ptr<BPPNNLS<arma::Mat<double>, arma::Col<double> > > >::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
105 | for (int i = 0; i < subproblems.size(); i++) {
| ^
[ 82%] Building CXX object nmf/CMakeFiles/nmflib.dir/__/nnls/nnls_lib.cpp.obj
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/nmf && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/g++.exe -std=gnu++17 -DUSING_R -D_GNU_SOURCE -D_POSIX_C_SOURCE=200809L -Dnmflib_EXPORTS @CMakeFiles/nmflib.dir/includes_CXX.rsp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -O2 -g -DNDEBUG -fno-keep-inline-dllexport -fopenmp -funsafe-math-optimizations -ffinite-math-only -fno-trapping-math -fno-math-errno -fno-signed-zeros -freciprocal-math -mavx -mpopcnt -MD -MT nmf/CMakeFiles/nmflib.dir/__/nnls/nnls_lib.cpp.obj -MF CMakeFiles/nmflib.dir/__/nnls/nnls_lib.cpp.obj.d -o CMakeFiles/nmflib.dir/__/nnls/nnls_lib.cpp.obj -c D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/nnls/nnls_lib.cpp
[ 88%] Building CXX object nmf/CMakeFiles/nmflib.dir/__/common/parseutils.cpp.obj
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/nmf && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/g++.exe -std=gnu++17 -DUSING_R -D_GNU_SOURCE -D_POSIX_C_SOURCE=200809L -Dnmflib_EXPORTS @CMakeFiles/nmflib.dir/includes_CXX.rsp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -O2 -g -DNDEBUG -fno-keep-inline-dllexport -fopenmp -funsafe-math-optimizations -ffinite-math-only -fno-trapping-math -fno-math-errno -fno-signed-zeros -freciprocal-math -mavx -mpopcnt -MD -MT nmf/CMakeFiles/nmflib.dir/__/common/parseutils.cpp.obj -MF CMakeFiles/nmflib.dir/__/common/parseutils.cpp.obj.d -o CMakeFiles/nmflib.dir/__/common/parseutils.cpp.obj -c D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/parseutils.cpp
[ 94%] Building CXX object nmf/CMakeFiles/nmflib.dir/__/common/data.cpp.obj
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/nmf && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/g++.exe -std=gnu++17 -DUSING_R -D_GNU_SOURCE -D_POSIX_C_SOURCE=200809L -Dnmflib_EXPORTS @CMakeFiles/nmflib.dir/includes_CXX.rsp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -O2 -g -DNDEBUG -fno-keep-inline-dllexport -fopenmp -funsafe-math-optimizations -ffinite-math-only -fno-trapping-math -fno-math-errno -fno-signed-zeros -freciprocal-math -mavx -mpopcnt -MD -MT nmf/CMakeFiles/nmflib.dir/__/common/data.cpp.obj -MF CMakeFiles/nmflib.dir/__/common/data.cpp.obj.d -o CMakeFiles/nmflib.dir/__/common/data.cpp.obj -c D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/planc/common/data.cpp
[100%] Linking CXX shared library libnmflib.dll
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/nmf && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E rm -f CMakeFiles/nmflib.dir/objects.a
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/nmf && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/ar.exe qc CMakeFiles/nmflib.dir/objects.a @CMakeFiles/nmflib.dir/objects1.rsp
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/nmf && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/g++.exe -std=gnu++17 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -O2 -g -DNDEBUG -fopenmp -shared -o libnmflib.dll -Wl,--out-implib,libnmflib.dll.a -Wl,--major-image-version,0,--minor-image-version,0 -Wl,--whole-archive CMakeFiles/nmflib.dir/objects.a -Wl,--no-whole-archive @CMakeFiles/nmflib.dir/linkLibs.rsp
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/nmf && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E remove D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/_deps/highfive-src/../highfive-subbuild/Makefile
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/nmf && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E remove D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/nmf/../CMakeFiles/3.30.4/CompilerIdC/CMakeCCompilerId.c
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/nmf && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E remove D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/nmf/../CMakeFiles/3.30.4/CompilerIdCXX/CMakeCXXCompilerId.cpp
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/nmf && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E remove D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/nmf/Makefile
cd D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/nmf && D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E remove D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/nmf/../Makefile
make[3]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
[100%] Built target nmflib
make[2]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
D:/rtools45/x86_64-w64-mingw32.static.posix/bin/cmake.exe -E cmake_progress_start D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/CMakeFiles 0
gmake.exe[1]: Leaving directory 'D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build'
-- Install configuration: "RelWithDebInfo"
-- Installing: D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/../libnmflib.dll.a
-- Installing: D:/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src/build/../libnmflib.dll
** libs
using C++ compiler: 'g++.exe (GCC) 14.2.0'
using C++17
make[1]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -Iplanc/common -Iplanc/nmf -Iplanc/nnls -Ibuild/_deps/highfive-src/include -Ibuild/nmf -DUSING_R -DHIGHFIVE_HAS_CONCEPTS=0 -DMPI_NO_CPPBIND -DRcppPlanc_EXPORTS -D_GNU_SOURCE -D_POSIX_C_SOURCE=200809L -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppProgress/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -Iplanc/common -Iplanc/nmf -Iplanc/nnls -Ibuild/_deps/highfive-src/include -Ibuild/nmf -DUSING_R -DHIGHFIVE_HAS_CONCEPTS=0 -DMPI_NO_CPPBIND -DRcppPlanc_EXPORTS -D_GNU_SOURCE -D_POSIX_C_SOURCE=200809L -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppProgress/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c rcppplanc_nmf.cpp -o rcppplanc_nmf.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -Iplanc/common -Iplanc/nmf -Iplanc/nnls -Ibuild/_deps/highfive-src/include -Ibuild/nmf -DUSING_R -DHIGHFIVE_HAS_CONCEPTS=0 -DMPI_NO_CPPBIND -DRcppPlanc_EXPORTS -D_GNU_SOURCE -D_POSIX_C_SOURCE=200809L -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppProgress/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c rcppplanc_nnls.cpp -o rcppplanc_nnls.o
g++ -shared -s -static-libgcc -o RcppPlanc.dll RcppPlanc-win.def RcppExports.o rcppplanc_nmf.o rcppplanc_nnls.o -L./ -lnmflib -fopenmp -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src'
make[1]: Entering directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src'
make[1]: Leaving directory '/d/temp/2025_07_01_01_50_01_1069/Rtmp0s4gon/R.INSTALL458017463d15/RcppPlanc/src'
installing to d:/Rcompile/CRANpkg/lib/4.6/00LOCK-RcppPlanc/00new/RcppPlanc/libs/x64
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'RcppPlanc' as RcppPlanc_2.0.12.zip
* DONE (RcppPlanc)