- using R Under development (unstable) (2024-10-11 r87227 ucrt)
- using platform: x86_64-w64-mingw32
- R was compiled by
gcc.exe (GCC) 13.2.0
GNU Fortran (GCC) 13.2.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
- checking for file 'RDML/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'RDML' version '1.0'
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'RDML' can be installed ... OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s] OK
- checking whether the package can be loaded with stated dependencies ... [1s] OK
- checking whether the package can be unloaded cleanly ... [1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [2s] OK
- checking whether the namespace can be unloaded cleanly ... [1s] OK
- checking loading without being on the library search path ... [2s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [7s] OK
- checking Rd files ... [2s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
RDML.Rd: R6Class
adpsType.Rd: R6Class
annotationType.Rd: R6Class
baseTemperatureType.Rd: R6Class
cdnaSynthesisMethodType.Rd: R6Class
commercialAssayType.Rd: R6Class
cqDetectionMethodType.Rd: R6Class
dataCollectionSoftwareType.Rd: R6Class
dataType.Rd: R6Class
documentationType.Rd: R6Class
dyeType.Rd: R6Class
enumType.Rd: R6Class
experimentType.Rd: R6Class
experimenterType.Rd: R6Class
gradientType.Rd: R6Class
idReferencesType.Rd: R6Class
idType.Rd: R6Class
labelFormatType.Rd: R6Class
lidOpenType.Rd: R6Class
loopType.Rd: R6Class
mdpsType.Rd: R6Class
measureType.Rd: R6Class
nucleotideType.Rd: R6Class
oligoType.Rd: R6Class
pauseType.Rd: R6Class
pcrFormatType.Rd: R6Class
primingMethodType.Rd: R6Class
quantityType.Rd: R6Class
quantityUnitType.Rd: R6Class
rdmlBaseType.Rd: R6Class
rdmlIdType.Rd: R6Class
reactIdType.Rd: R6Class
reactType.Rd: R6Class
runType.Rd: R6Class
sampleType.Rd: R6Class
sampleTypeType.Rd: R6Class
sequencesType.Rd: R6Class
stepType.Rd: R6Class
targetType.Rd: R6Class
targetTypeType.Rd: R6Class
temperatureType.Rd: R6Class
templateQuantityType.Rd: R6Class
thermalCyclingConditionsType.Rd: R6Class
xRefType.Rd: R6Class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking LazyData ... NOTE
'LazyData' is specified without a 'data' directory
- checking examples ... [5s] OK
- checking for unstated dependencies in 'tests' ... OK
- checking tests ... [5s] OK
Running 'testthat.R' [5s]
- checking PDF version of manual ... [25s] OK
- checking HTML version of manual ... [11s] OK
- DONE
Status: 2 NOTEs