- using R Under development (unstable) (2026-08-17 r90424 ucrt)
- using platform: x86_64-w64-mingw32
- R was compiled by
gcc.exe (GCC) 14.3.0
GNU Fortran (GCC) 14.3.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
* current time: 2026-08-18 06:01:29 UTC
- checking for file 'BiocManager/DESCRIPTION' ... OK
- this is package 'BiocManager' version '1.30.27'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'BiocManager' can be installed ... OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking 'build' directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s] OK
- checking whether the package can be loaded with stated dependencies ... [1s] OK
- checking whether the package can be unloaded cleanly ... [0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s] OK
- checking whether the namespace can be unloaded cleanly ... [1s] OK
- checking loading without being on the library search path ... [1s] OK
- checking whether startup messages can be suppressed ... [1s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [4s] OK
- checking Rd files ... [1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from 'inst/doc' ... OK
- checking files in 'vignettes' ... OK
- checking examples ... [1s] OK
- checking for unstated dependencies in 'tests' ... OK
- checking tests ... [6s] ERROR
Running 'testthat.R' [5s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(BiocManager)
Bioconductor does not yet build and check packages for R version 4.7, using
unsupported Bioconductor version 3.23; see https://bioconductor.org/install
>
> test_check("BiocManager")
Saving _problems/test_version-307.R
Saving _problems/test_version-311.R
[ FAIL 2 | WARN 2 | SKIP 25 | PASS 91 ]
══ Skipped tests (25) ══════════════════════════════════════════════════════════
• On CRAN (24): 'test_install.R:27:5', 'test_install.R:45:5',
'test_install.R:219:5', 'test_repositories.R:5:5',
'test_repositories.R:14:5', 'test_repositories.R:20:5',
'test_repositories.R:26:5', 'test_repositories.R:80:5',
'test_repositories.R:90:5', 'test_repositories.R:164:5',
'test_repositories.R:173:5', 'test_repositories.R:211:5',
'test_version.R:17:5', 'test_version.R:39:5', 'test_version.R:92:5',
'test_version.R:107:5', 'test_version.R:147:5', 'test_version.R:194:5',
'test_version.R:235:5', 'test_version.R:246:5', 'test_version.R:277:5',
'test_version.R:328:5', 'test_version.R:387:5', 'test_version.R:428:5'
• too idiosyncratic for standardized testing (1): 'test_install.R:179:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_version.R:307:5'): .version_map_get() falls back to http ─────
Expected `length(msgs)` to be identical to 2L.
Differences:
1/1 mismatches
[1] 1 - 2 == -1
── Failure ('test_version.R:311:5'): .version_map_get() falls back to http ─────
Expected `sum(grepl("http://httpbin.org", msgs))` to be identical to 1L.
Differences:
1/1 mismatches
[1] 0 - 1 == -1
[ FAIL 2 | WARN 2 | SKIP 25 | PASS 91 ]
Error:
! Test failures.
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [4s] OK
- checking PDF version of manual ... [19s] OK
- checking HTML version of manual ... [1s] OK
- DONE
Status: 1 ERROR