* installing *source* package ‘trialr’ ...
** this is package ‘trialr’ version ‘0.1.6’
** package ‘trialr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 17.0.0 (clang-1700.3.19.1)’
using C++17
using SDK: ‘MacOSX14.5.sdk’
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/BH/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -I/opt/R/arm64/include -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/BH/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -I/opt/R/arm64/include -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c stanExports_AugBin2T1A.cc -o stanExports_AugBin2T1A.o
In file included from RcppExports.cpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from RcppExports.cpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from RcppExports.cpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from RcppExports.cpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/BH/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -I/opt/R/arm64/include -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c stanExports_BebopInPeps2.cc -o stanExports_BebopInPeps2.o
5 warnings generated.
In file included from stanExports_AugBin2T1A.cc:5:
In file included from ./stanExports_AugBin2T1A.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from stanExports_AugBin2T1A.cc:5:
In file included from ./stanExports_AugBin2T1A.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from stanExports_AugBin2T1A.cc:5:
In file included from ./stanExports_AugBin2T1A.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
47 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
295 | virtual streamsize xsputn(const char_type* __s, streamsize __n);
| ^
In file included from stanExports_AugBin2T1A.cc:5:
In file included from ./stanExports_AugBin2T1A.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
70 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
295 | virtual streamsize xsputn(const char_type* __s, streamsize __n);
| ^
In file included from stanExports_AugBin2T1A.cc:5:
In file included from ./stanExports_AugBin2T1A.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/BH/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -I/opt/R/arm64/include -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c stanExports_CrmEmpiricNormalPrior.cc -o stanExports_CrmEmpiricNormalPrior.o
In file included from stanExports_AugBin2T1A.cc:5:
In file included from ./stanExports_AugBin2T1A.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from stanExports_BebopInPeps2.cc:5:
In file included from ./stanExports_BebopInPeps2.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from stanExports_BebopInPeps2.cc:5:
In file included from ./stanExports_BebopInPeps2.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from stanExports_AugBin2T1A.cc:5:
In file included from ./stanExports_AugBin2T1A.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:43:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
45 | class ops_partials_edge;
| ^~~~~
| struct
In file included from stanExports_BebopInPeps2.cc:5:
In file included from ./stanExports_BebopInPeps2.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
47 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
295 | virtual streamsize xsputn(const char_type* __s, streamsize __n);
| ^
In file included from stanExports_BebopInPeps2.cc:5:
In file included from ./stanExports_BebopInPeps2.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
70 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
295 | virtual streamsize xsputn(const char_type* __s, streamsize __n);
| ^
In file included from stanExports_BebopInPeps2.cc:5:
In file included from ./stanExports_BebopInPeps2.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/BH/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -I/opt/R/arm64/include -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c stanExports_CrmOneParamLogisticGammaPrior.cc -o stanExports_CrmOneParamLogisticGammaPrior.o
In file included from stanExports_BebopInPeps2.cc:5:
In file included from ./stanExports_BebopInPeps2.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from stanExports_CrmEmpiricNormalPrior.cc:5:
In file included from ./stanExports_CrmEmpiricNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from stanExports_CrmEmpiricNormalPrior.cc:5:
In file included from ./stanExports_CrmEmpiricNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from stanExports_BebopInPeps2.cc:5:
In file included from ./stanExports_BebopInPeps2.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:43:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
45 | class ops_partials_edge;
| ^~~~~
| struct
In file included from stanExports_CrmEmpiricNormalPrior.cc:5:
In file included from ./stanExports_CrmEmpiricNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
47 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
295 | virtual streamsize xsputn(const char_type* __s, streamsize __n);
| ^
In file included from stanExports_CrmEmpiricNormalPrior.cc:5:
In file included from ./stanExports_CrmEmpiricNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
70 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
295 | virtual streamsize xsputn(const char_type* __s, streamsize __n);
| ^
In file included from stanExports_CrmEmpiricNormalPrior.cc:5:
In file included from ./stanExports_CrmEmpiricNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from stanExports_CrmEmpiricNormalPrior.cc:5:
In file included from ./stanExports_CrmEmpiricNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/BH/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -I/opt/R/arm64/include -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c stanExports_CrmOneParamLogisticNormalPrior.cc -o stanExports_CrmOneParamLogisticNormalPrior.o
In file included from stanExports_CrmOneParamLogisticGammaPrior.cc:5:
In file included from ./stanExports_CrmOneParamLogisticGammaPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from stanExports_CrmOneParamLogisticGammaPrior.cc:5:
In file included from ./stanExports_CrmOneParamLogisticGammaPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from stanExports_CrmEmpiricNormalPrior.cc:5:
In file included from ./stanExports_CrmEmpiricNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:43:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
45 | class ops_partials_edge;
| ^~~~~
| struct
In file included from stanExports_CrmOneParamLogisticGammaPrior.cc:5:
In file included from ./stanExports_CrmOneParamLogisticGammaPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
47 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
295 | virtual streamsize xsputn(const char_type* __s, streamsize __n);
| ^
In file included from stanExports_CrmOneParamLogisticGammaPrior.cc:5:
In file included from ./stanExports_CrmOneParamLogisticGammaPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
70 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
295 | virtual streamsize xsputn(const char_type* __s, streamsize __n);
| ^
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/BH/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -I/opt/R/arm64/include -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c stanExports_CrmTwoParamLogisticNormalPrior.cc -o stanExports_CrmTwoParamLogisticNormalPrior.o
In file included from stanExports_CrmOneParamLogisticGammaPrior.cc:5:
In file included from ./stanExports_CrmOneParamLogisticGammaPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from stanExports_CrmOneParamLogisticGammaPrior.cc:5:
In file included from ./stanExports_CrmOneParamLogisticGammaPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from stanExports_CrmOneParamLogisticNormalPrior.cc:5:
In file included from ./stanExports_CrmOneParamLogisticNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from stanExports_CrmOneParamLogisticNormalPrior.cc:5:
In file included from ./stanExports_CrmOneParamLogisticNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from stanExports_CrmOneParamLogisticNormalPrior.cc:5:
In file included from ./stanExports_CrmOneParamLogisticNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
47 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
295 | virtual streamsize xsputn(const char_type* __s, streamsize __n);
| ^
In file included from stanExports_CrmOneParamLogisticNormalPrior.cc:5:
In file included from ./stanExports_CrmOneParamLogisticNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
70 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
295 | virtual streamsize xsputn(const char_type* __s, streamsize __n);
| ^
In file included from stanExports_CrmOneParamLogisticGammaPrior.cc:5:
In file included from ./stanExports_CrmOneParamLogisticGammaPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:43:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
45 | class ops_partials_edge;
| ^~~~~
| struct
In file included from stanExports_CrmOneParamLogisticNormalPrior.cc:5:
In file included from ./stanExports_CrmOneParamLogisticNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from stanExports_CrmOneParamLogisticNormalPrior.cc:5:
In file included from ./stanExports_CrmOneParamLogisticNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from stanExports_CrmTwoParamLogisticNormalPrior.cc:5:
In file included from ./stanExports_CrmTwoParamLogisticNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from stanExports_CrmTwoParamLogisticNormalPrior.cc:5:
In file included from ./stanExports_CrmTwoParamLogisticNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from stanExports_CrmTwoParamLogisticNormalPrior.cc:5:
In file included from ./stanExports_CrmTwoParamLogisticNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
47 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
295 | virtual streamsize xsputn(const char_type* __s, streamsize __n);
| ^
In file included from stanExports_CrmTwoParamLogisticNormalPrior.cc:5:
In file included from ./stanExports_CrmTwoParamLogisticNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
70 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
295 | virtual streamsize xsputn(const char_type* __s, streamsize __n);
| ^
In file included from stanExports_CrmTwoParamLogisticNormalPrior.cc:5:
In file included from ./stanExports_CrmTwoParamLogisticNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from stanExports_CrmOneParamLogisticNormalPrior.cc:5:
In file included from ./stanExports_CrmOneParamLogisticNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:43:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
45 | class ops_partials_edge;
| ^~~~~
| struct
In file included from stanExports_CrmTwoParamLogisticNormalPrior.cc:5:
In file included from ./stanExports_CrmTwoParamLogisticNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from stanExports_AugBin2T1A.cc:5:
In file included from ./stanExports_AugBin2T1A.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
1252 | int ret = stan::services::error_codes::CONFIG;
| ^
In file included from stanExports_CrmTwoParamLogisticNormalPrior.cc:5:
In file included from ./stanExports_CrmTwoParamLogisticNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:43:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
45 | class ops_partials_edge;
| ^~~~~
| struct
In file included from stanExports_AugBin2T1A.cc:5:
./stanExports_AugBin2T1A.h:736:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
736 | int pos__ = std::numeric_limits<int>::min();
| ^
In file included from stanExports_BebopInPeps2.cc:5:
In file included from ./stanExports_BebopInPeps2.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
1252 | int ret = stan::services::error_codes::CONFIG;
| ^
In file included from stanExports_BebopInPeps2.cc:5:
./stanExports_BebopInPeps2.h:222:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
222 | int pos__ = std::numeric_limits<int>::min();
| ^
./stanExports_BebopInPeps2.h:534:20: warning: unused variable 'jacobian__' [-Wunused-variable]
534 | constexpr bool jacobian__ = false;
| ^~~~~~~~~~
./stanExports_BebopInPeps2.h:648:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
648 | int pos__ = std::numeric_limits<int>::min();
| ^
./stanExports_BebopInPeps2.h:707:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
707 | int pos__ = std::numeric_limits<int>::min();
| ^
In file included from stanExports_CrmEmpiricNormalPrior.cc:5:
In file included from ./stanExports_CrmEmpiricNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
1252 | int ret = stan::services::error_codes::CONFIG;
| ^
In file included from stanExports_CrmEmpiricNormalPrior.cc:5:
./stanExports_CrmEmpiricNormalPrior.h:157:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
157 | int pos__ = std::numeric_limits<int>::min();
| ^
./stanExports_CrmEmpiricNormalPrior.h:329:20: warning: unused variable 'jacobian__' [-Wunused-variable]
329 | constexpr bool jacobian__ = false;
| ^~~~~~~~~~
./stanExports_CrmEmpiricNormalPrior.h:410:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
410 | int pos__ = std::numeric_limits<int>::min();
| ^
./stanExports_CrmEmpiricNormalPrior.h:434:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
434 | int pos__ = std::numeric_limits<int>::min();
| ^
In file included from stanExports_CrmOneParamLogisticGammaPrior.cc:5:
In file included from ./stanExports_CrmOneParamLogisticGammaPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
1252 | int ret = stan::services::error_codes::CONFIG;
| ^
In file included from stanExports_CrmOneParamLogisticGammaPrior.cc:5:
./stanExports_CrmOneParamLogisticGammaPrior.h:170:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
170 | int pos__ = std::numeric_limits<int>::min();
| ^
./stanExports_CrmOneParamLogisticGammaPrior.h:375:20: warning: unused variable 'jacobian__' [-Wunused-variable]
375 | constexpr bool jacobian__ = false;
| ^~~~~~~~~~
./stanExports_CrmOneParamLogisticGammaPrior.h:456:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
456 | int pos__ = std::numeric_limits<int>::min();
| ^
./stanExports_CrmOneParamLogisticGammaPrior.h:480:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
480 | int pos__ = std::numeric_limits<int>::min();
| ^
In file included from stanExports_CrmOneParamLogisticNormalPrior.cc:5:
In file included from ./stanExports_CrmOneParamLogisticNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
1252 | int ret = stan::services::error_codes::CONFIG;
| ^
In file included from stanExports_CrmOneParamLogisticNormalPrior.cc:5:
./stanExports_CrmOneParamLogisticNormalPrior.h:170:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
170 | int pos__ = std::numeric_limits<int>::min();
| ^
./stanExports_CrmOneParamLogisticNormalPrior.h:371:20: warning: unused variable 'jacobian__' [-Wunused-variable]
371 | constexpr bool jacobian__ = false;
| ^~~~~~~~~~
./stanExports_CrmOneParamLogisticNormalPrior.h:452:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
452 | int pos__ = std::numeric_limits<int>::min();
| ^
./stanExports_CrmOneParamLogisticNormalPrior.h:476:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
476 | int pos__ = std::numeric_limits<int>::min();
| ^
In file included from stanExports_CrmTwoParamLogisticNormalPrior.cc:5:
In file included from ./stanExports_CrmTwoParamLogisticNormalPrior.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
1252 | int ret = stan::services::error_codes::CONFIG;
| ^
In file included from stanExports_CrmTwoParamLogisticNormalPrior.cc:5:
./stanExports_CrmTwoParamLogisticNormalPrior.h:174:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
174 | int pos__ = std::numeric_limits<int>::min();
| ^
./stanExports_CrmTwoParamLogisticNormalPrior.h:389:20: warning: unused variable 'jacobian__' [-Wunused-variable]
389 | constexpr bool jacobian__ = false;
| ^~~~~~~~~~
./stanExports_CrmTwoParamLogisticNormalPrior.h:474:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
474 | int pos__ = std::numeric_limits<int>::min();
| ^
./stanExports_CrmTwoParamLogisticNormalPrior.h:505:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
505 | int pos__ = std::numeric_limits<int>::min();
| ^
13 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/BH/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -I/opt/R/arm64/include -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c stanExports_EffTox.cc -o stanExports_EffTox.o
13 warnings generated.
13 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/BH/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -I/opt/R/arm64/include -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c stanExports_NeuenschwanderTwoParamLogit.cc -o stanExports_NeuenschwanderTwoParamLogit.o
In file included from stanExports_EffTox.cc:5:
In file included from ./stanExports_EffTox.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from stanExports_EffTox.cc:5:
In file included from ./stanExports_EffTox.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from stanExports_EffTox.cc:5:
In file included from ./stanExports_EffTox.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
47 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
295 | virtual streamsize xsputn(const char_type* __s, streamsize __n);
| ^
In file included from stanExports_EffTox.cc:5:
In file included from ./stanExports_EffTox.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
70 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
295 | virtual streamsize xsputn(const char_type* __s, streamsize __n);
| ^
In file included from stanExports_EffTox.cc:5:
In file included from ./stanExports_EffTox.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
13 warnings generated.
In file included from stanExports_EffTox.cc:5:
In file included from ./stanExports_EffTox.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/BH/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -I/opt/R/arm64/include -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c stanExports_ThallHierarchicalBinary.cc -o stanExports_ThallHierarchicalBinary.o
In file included from stanExports_EffTox.cc:5:
In file included from ./stanExports_EffTox.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:43:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
45 | class ops_partials_edge;
| ^~~~~
| struct
In file included from stanExports_NeuenschwanderTwoParamLogit.cc:5:
In file included from ./stanExports_NeuenschwanderTwoParamLogit.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from stanExports_NeuenschwanderTwoParamLogit.cc:5:
In file included from ./stanExports_NeuenschwanderTwoParamLogit.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
13 warnings generated.
In file included from stanExports_NeuenschwanderTwoParamLogit.cc:5:
In file included from ./stanExports_NeuenschwanderTwoParamLogit.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
47 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
295 | virtual streamsize xsputn(const char_type* __s, streamsize __n);
| ^
In file included from stanExports_NeuenschwanderTwoParamLogit.cc:5:
In file included from ./stanExports_NeuenschwanderTwoParamLogit.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
70 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
295 | virtual streamsize xsputn(const char_type* __s, streamsize __n);
| ^
In file included from stanExports_NeuenschwanderTwoParamLogit.cc:5:
In file included from ./stanExports_NeuenschwanderTwoParamLogit.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from stanExports_NeuenschwanderTwoParamLogit.cc:5:
In file included from ./stanExports_NeuenschwanderTwoParamLogit.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from stanExports_ThallHierarchicalBinary.cc:5:
In file included from ./stanExports_ThallHierarchicalBinary.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from stanExports_ThallHierarchicalBinary.cc:5:
In file included from ./stanExports_ThallHierarchicalBinary.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from stanExports_NeuenschwanderTwoParamLogit.cc:5:
In file included from ./stanExports_NeuenschwanderTwoParamLogit.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:43:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
45 | class ops_partials_edge;
| ^~~~~
| struct
In file included from stanExports_ThallHierarchicalBinary.cc:5:
In file included from ./stanExports_ThallHierarchicalBinary.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
47 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
295 | virtual streamsize xsputn(const char_type* __s, streamsize __n);
| ^
In file included from stanExports_ThallHierarchicalBinary.cc:5:
In file included from ./stanExports_ThallHierarchicalBinary.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
70 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
295 | virtual streamsize xsputn(const char_type* __s, streamsize __n);
| ^
In file included from stanExports_ThallHierarchicalBinary.cc:5:
In file included from ./stanExports_ThallHierarchicalBinary.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from stanExports_ThallHierarchicalBinary.cc:5:
In file included from ./stanExports_ThallHierarchicalBinary.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from stanExports_ThallHierarchicalBinary.cc:5:
In file included from ./stanExports_ThallHierarchicalBinary.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:43:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
45 | class ops_partials_edge;
| ^~~~~
| struct
In file included from stanExports_EffTox.cc:5:
In file included from ./stanExports_EffTox.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
1252 | int ret = stan::services::error_codes::CONFIG;
| ^
In file included from stanExports_EffTox.cc:5:
./stanExports_EffTox.h:256:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
256 | int pos__ = std::numeric_limits<int>::min();
| ^
./stanExports_EffTox.h:639:20: warning: unused variable 'jacobian__' [-Wunused-variable]
639 | constexpr bool jacobian__ = false;
| ^~~~~~~~~~
./stanExports_EffTox.h:747:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
747 | int pos__ = std::numeric_limits<int>::min();
| ^
./stanExports_EffTox.h:806:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
806 | int pos__ = std::numeric_limits<int>::min();
| ^
In file included from stanExports_NeuenschwanderTwoParamLogit.cc:5:
In file included from ./stanExports_NeuenschwanderTwoParamLogit.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
1252 | int ret = stan::services::error_codes::CONFIG;
| ^
In file included from stanExports_NeuenschwanderTwoParamLogit.cc:5:
./stanExports_NeuenschwanderTwoParamLogit.h:174:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
174 | int pos__ = std::numeric_limits<int>::min();
| ^
./stanExports_NeuenschwanderTwoParamLogit.h:398:20: warning: unused variable 'jacobian__' [-Wunused-variable]
398 | constexpr bool jacobian__ = false;
| ^~~~~~~~~~
./stanExports_NeuenschwanderTwoParamLogit.h:482:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
482 | int pos__ = std::numeric_limits<int>::min();
| ^
./stanExports_NeuenschwanderTwoParamLogit.h:513:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
513 | int pos__ = std::numeric_limits<int>::min();
| ^
In file included from stanExports_ThallHierarchicalBinary.cc:5:
In file included from ./stanExports_ThallHierarchicalBinary.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
1252 | int ret = stan::services::error_codes::CONFIG;
| ^
In file included from stanExports_ThallHierarchicalBinary.cc:5:
./stanExports_ThallHierarchicalBinary.h:85:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
85 | int pos__ = std::numeric_limits<int>::min();
| ^
./stanExports_ThallHierarchicalBinary.h:338:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
338 | int pos__ = std::numeric_limits<int>::min();
| ^
./stanExports_ThallHierarchicalBinary.h:379:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
379 | int pos__ = std::numeric_limits<int>::min();
| ^
10 warnings generated.
13 warnings generated.
13 warnings generated.
12 warnings generated.
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o trialr.so RcppExports.o stanExports_AugBin2T1A.o stanExports_BebopInPeps2.o stanExports_CrmEmpiricNormalPrior.o stanExports_CrmOneParamLogisticGammaPrior.o stanExports_CrmOneParamLogisticNormalPrior.o stanExports_CrmTwoParamLogisticNormalPrior.o stanExports_EffTox.o stanExports_NeuenschwanderTwoParamLogit.o stanExports_ThallHierarchicalBinary.o -L/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/lib -ltbb -ltbbmalloc -L/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/lib/ -Wl,-rpath,/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/lib/ -ltbb -ltbbmalloc -F/Library/Frameworks/R.framework/.. -framework R
ld: warning: ignoring duplicate libraries: '-ltbb', '-ltbbmalloc'
installing to /Volumes/Builds/packages/sonoma-arm64/results/4.6/trialr.Rcheck/00LOCK-trialr/00new/trialr/libs
** generating debug symbols (dSYM)
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (trialr)