- using R version 4.6.0 alpha (2026-03-26 r89725)
- using platform: aarch64-apple-darwin23
- R was compiled by
Apple clang version 17.0.0 (clang-1700.3.19.1)
GNU Fortran (GCC) 14.2.0
- running under: macOS Sequoia 15.7.1
- using session charset: UTF-8
* current time: 2026-03-28 07:35:23 UTC
- checking for file ‘spectr/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘spectr’ version ‘1.0.1’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘spectr’ can be installed ... [1s/1s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [1s/1s] OK
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... [1s/1s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [1s/1s] ERROR
Running ‘testthat.R’ [1s/1s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(spectr)
>
> test_check('spectr')
Saving _problems/test_pgram-15.R
Saving _problems/test_pgram-24.R
Saving _problems/test_pgram-33.R
Saving _problems/test_pgram-41.R
Saving _problems/test_pgram-49.R
Saving _problems/test_spectr-15.R
Saving _problems/test_spectr-24.R
Saving _problems/test_spectr-33.R
Saving _problems/test_spectr-42.R
Saving _problems/test_spectr-51.R
[ FAIL 10 | WARN 0 | SKIP 0 | PASS 3 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_pgram.R:15:3'): CSP greedy ─────────────────────────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so':
dlopen(/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so, 0x0006): Symbol not found: _SET_CLOENV
Referenced from: <AA665871-E63C-349E-A381-34F936D898C9> /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so
Expected in: <7D8EC208-B127-3C2C-AA52-D176E9D2B2D9> /Library/Frameworks/R.framework/Versions/4.6/Resources/lib/libR.dylib
Backtrace:
▆
1. └─base::loadNamespace(x) at test_pgram.R:15:3
2. └─base::library.dynam(lib, package, package.lib)
3. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test_pgram.R:24:3'): CSP conservative ───────────────────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so':
dlopen(/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so, 0x0006): Symbol not found: _SET_CLOENV
Referenced from: <AA665871-E63C-349E-A381-34F936D898C9> /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so
Expected in: <7D8EC208-B127-3C2C-AA52-D176E9D2B2D9> /Library/Frameworks/R.framework/Versions/4.6/Resources/lib/libR.dylib
Backtrace:
▆
1. └─base::loadNamespace(x) at test_pgram.R:24:3
2. └─base::library.dynam(lib, package, package.lib)
3. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test_pgram.R:33:3'): CSP standard ───────────────────────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so':
dlopen(/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so, 0x0006): Symbol not found: _SET_CLOENV
Referenced from: <AA665871-E63C-349E-A381-34F936D898C9> /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so
Expected in: <7D8EC208-B127-3C2C-AA52-D176E9D2B2D9> /Library/Frameworks/R.framework/Versions/4.6/Resources/lib/libR.dylib
Backtrace:
▆
1. └─base::loadNamespace(x) at test_pgram.R:33:3
2. └─base::library.dynam(lib, package, package.lib)
3. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test_pgram.R:41:3'): FFT ────────────────────────────────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so':
dlopen(/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so, 0x0006): Symbol not found: _SET_CLOENV
Referenced from: <AA665871-E63C-349E-A381-34F936D898C9> /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so
Expected in: <7D8EC208-B127-3C2C-AA52-D176E9D2B2D9> /Library/Frameworks/R.framework/Versions/4.6/Resources/lib/libR.dylib
Backtrace:
▆
1. └─base::loadNamespace(x) at test_pgram.R:41:3
2. └─base::library.dynam(lib, package, package.lib)
3. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test_pgram.R:49:3'): Lomb-Scargle ───────────────────────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so':
dlopen(/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so, 0x0006): Symbol not found: _SET_CLOENV
Referenced from: <AA665871-E63C-349E-A381-34F936D898C9> /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so
Expected in: <7D8EC208-B127-3C2C-AA52-D176E9D2B2D9> /Library/Frameworks/R.framework/Versions/4.6/Resources/lib/libR.dylib
Backtrace:
▆
1. └─base::loadNamespace(x) at test_pgram.R:49:3
2. └─base::library.dynam(lib, package, package.lib)
3. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test_spectr.R:15:3'): spectr CSP greedy ─────────────────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so':
dlopen(/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so, 0x0006): Symbol not found: _SET_CLOENV
Referenced from: <AA665871-E63C-349E-A381-34F936D898C9> /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so
Expected in: <7D8EC208-B127-3C2C-AA52-D176E9D2B2D9> /Library/Frameworks/R.framework/Versions/4.6/Resources/lib/libR.dylib
Backtrace:
▆
1. └─base::loadNamespace(x) at test_spectr.R:15:3
2. └─base::library.dynam(lib, package, package.lib)
3. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test_spectr.R:24:3'): spectr CSP conservative ───────────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so':
dlopen(/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so, 0x0006): Symbol not found: _SET_CLOENV
Referenced from: <AA665871-E63C-349E-A381-34F936D898C9> /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so
Expected in: <7D8EC208-B127-3C2C-AA52-D176E9D2B2D9> /Library/Frameworks/R.framework/Versions/4.6/Resources/lib/libR.dylib
Backtrace:
▆
1. └─base::loadNamespace(x) at test_spectr.R:24:3
2. └─base::library.dynam(lib, package, package.lib)
3. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test_spectr.R:33:3'): spectr CSP standard ───────────────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so':
dlopen(/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so, 0x0006): Symbol not found: _SET_CLOENV
Referenced from: <AA665871-E63C-349E-A381-34F936D898C9> /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so
Expected in: <7D8EC208-B127-3C2C-AA52-D176E9D2B2D9> /Library/Frameworks/R.framework/Versions/4.6/Resources/lib/libR.dylib
Backtrace:
▆
1. └─base::loadNamespace(x) at test_spectr.R:33:3
2. └─base::library.dynam(lib, package, package.lib)
3. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test_spectr.R:42:3'): spectr Lomb-Scargle ───────────────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so':
dlopen(/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so, 0x0006): Symbol not found: _SET_CLOENV
Referenced from: <AA665871-E63C-349E-A381-34F936D898C9> /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so
Expected in: <7D8EC208-B127-3C2C-AA52-D176E9D2B2D9> /Library/Frameworks/R.framework/Versions/4.6/Resources/lib/libR.dylib
Backtrace:
▆
1. └─base::loadNamespace(x) at test_spectr.R:42:3
2. └─base::library.dynam(lib, package, package.lib)
3. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test_spectr.R:51:3'): spectr FFT ────────────────────────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so':
dlopen(/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so, 0x0006): Symbol not found: _SET_CLOENV
Referenced from: <AA665871-E63C-349E-A381-34F936D898C9> /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/qs/libs/qs.so
Expected in: <7D8EC208-B127-3C2C-AA52-D176E9D2B2D9> /Library/Frameworks/R.framework/Versions/4.6/Resources/lib/libR.dylib
Backtrace:
▆
1. └─base::loadNamespace(x) at test_spectr.R:51:3
2. └─base::library.dynam(lib, package, package.lib)
3. └─base::dyn.load(file, DLLpath = DLLpath, ...)
[ FAIL 10 | WARN 0 | SKIP 0 | PASS 3 ]
Error:
! Test failures.
Execution halted
- checking PDF version of manual ... [2s/2s] OK
- DONE
Status: 1 ERROR
- using check arguments '--no-clean-on-error '