Install log for 'mrbayes'

* installing *source* package ‘mrbayes’ ...
** this is package ‘mrbayes’ version ‘0.5.2’
** package ‘mrbayes’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 17.0.0 (clang-1700.3.19.1)’
using C++17
using SDK: ‘MacOSX14.5.sdk’


clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/BH/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include' -I/opt/R/arm64/include    -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o


clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/BH/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include' -I/opt/R/arm64/include    -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fPIC  -falign-functions=64 -Wall -g -O2   -c stanExports_mregger.cc -o stanExports_mregger.o


In file included from RcppExports.cpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from RcppExports.cpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
In file included from RcppExports.cpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
   72 |                         Index replacements = 0;
      |                               ^
In file included from RcppExports.cpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  246 |   int count = 0;
      |       ^
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/BH/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include' -I/opt/R/arm64/include    -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fPIC  -falign-functions=64 -Wall -g -O2   -c stanExports_mrivw.cc -o stanExports_mrivw.o
5 warnings generated.


In file included from stanExports_mregger.cc:5:
In file included from ./stanExports_mregger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from stanExports_mregger.cc:5:
In file included from ./stanExports_mregger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/BH/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include' -I/opt/R/arm64/include    -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fPIC  -falign-functions=64 -Wall -g -O2   -c stanExports_mrradialegger.cc -o stanExports_mrradialegger.o
In file included from stanExports_mregger.cc:5:
In file included from ./stanExports_mregger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
   47 |       virtual std::streamsize xsputn(const char_type* s, int n) {
      |                               ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
  295 |     virtual streamsize xsputn(const char_type* __s, streamsize __n);
      |                        ^
In file included from stanExports_mregger.cc:5:
In file included from ./stanExports_mregger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
   70 |       virtual std::streamsize xsputn(const char_type* s, int n) {
      |                               ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
  295 |     virtual streamsize xsputn(const char_type* __s, streamsize __n);
      |                        ^
In file included from stanExports_mregger.cc:5:
In file included from ./stanExports_mregger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
   72 |                         Index replacements = 0;
      |                               ^
In file included from stanExports_mregger.cc:5:
In file included from ./stanExports_mregger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  246 |   int count = 0;
      |       ^


In file included from stanExports_mrivw.cc:5:
In file included from ./stanExports_mrivw.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from stanExports_mrivw.cc:5:
In file included from ./stanExports_mrivw.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
In file included from stanExports_mrivw.cc:5:
In file included from ./stanExports_mrivw.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
   47 |       virtual std::streamsize xsputn(const char_type* s, int n) {
      |                               ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
  295 |     virtual streamsize xsputn(const char_type* __s, streamsize __n);
      |                        ^
In file included from stanExports_mrivw.cc:5:
In file included from ./stanExports_mrivw.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
   70 |       virtual std::streamsize xsputn(const char_type* s, int n) {
      |                               ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
  295 |     virtual streamsize xsputn(const char_type* __s, streamsize __n);
      |                        ^
In file included from stanExports_mrivw.cc:5:
In file included from ./stanExports_mrivw.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
   72 |                         Index replacements = 0;
      |                               ^
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/BH/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include' -I/opt/R/arm64/include    -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fPIC  -falign-functions=64 -Wall -g -O2   -c stanExports_mvmregger.cc -o stanExports_mvmregger.o
In file included from stanExports_mrivw.cc:5:
In file included from ./stanExports_mrivw.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  246 |   int count = 0;
      |       ^
In file included from stanExports_mregger.cc:5:
In file included from ./stanExports_mregger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:43:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct


In file included from stanExports_mrradialegger.cc:5:
In file included from ./stanExports_mrradialegger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from stanExports_mrradialegger.cc:5:
In file included from ./stanExports_mrradialegger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
In file included from stanExports_mrivw.cc:5:
In file included from ./stanExports_mrivw.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:43:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct
In file included from stanExports_mrradialegger.cc:5:
In file included from ./stanExports_mrradialegger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
   47 |       virtual std::streamsize xsputn(const char_type* s, int n) {
      |                               ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
  295 |     virtual streamsize xsputn(const char_type* __s, streamsize __n);
      |                        ^
In file included from stanExports_mrradialegger.cc:5:
In file included from ./stanExports_mrradialegger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
   70 |       virtual std::streamsize xsputn(const char_type* s, int n) {
      |                               ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
  295 |     virtual streamsize xsputn(const char_type* __s, streamsize __n);
      |                        ^
In file included from stanExports_mrradialegger.cc:5:
In file included from ./stanExports_mrradialegger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
   72 |                         Index replacements = 0;
      |                               ^
In file included from stanExports_mrradialegger.cc:5:
In file included from ./stanExports_mrradialegger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  246 |   int count = 0;
      |       ^
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/BH/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include' -I/opt/R/arm64/include    -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fPIC  -falign-functions=64 -Wall -g -O2   -c stanExports_mvmrivw.cc -o stanExports_mvmrivw.o
In file included from stanExports_mvmregger.cc:5:
In file included from ./stanExports_mvmregger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from stanExports_mvmregger.cc:5:
In file included from ./stanExports_mvmregger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
In file included from stanExports_mrradialegger.cc:5:
In file included from ./stanExports_mrradialegger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:43:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct
In file included from stanExports_mvmregger.cc:5:
In file included from ./stanExports_mvmregger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
   47 |       virtual std::streamsize xsputn(const char_type* s, int n) {
      |                               ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
  295 |     virtual streamsize xsputn(const char_type* __s, streamsize __n);
      |                        ^
In file included from stanExports_mvmregger.cc:5:
In file included from ./stanExports_mvmregger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
   70 |       virtual std::streamsize xsputn(const char_type* s, int n) {
      |                               ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
  295 |     virtual streamsize xsputn(const char_type* __s, streamsize __n);
      |                        ^
In file included from stanExports_mvmregger.cc:5:
In file included from ./stanExports_mvmregger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
   72 |                         Index replacements = 0;
      |                               ^
In file included from stanExports_mvmregger.cc:5:
In file included from ./stanExports_mvmregger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  246 |   int count = 0;
      |       ^
In file included from stanExports_mvmrivw.cc:5:
In file included from ./stanExports_mvmrivw.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from stanExports_mvmrivw.cc:5:
In file included from ./stanExports_mvmrivw.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
In file included from stanExports_mvmregger.cc:5:
In file included from ./stanExports_mvmregger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:43:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct
In file included from stanExports_mvmrivw.cc:5:
In file included from ./stanExports_mvmrivw.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
   47 |       virtual std::streamsize xsputn(const char_type* s, int n) {
      |                               ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
  295 |     virtual streamsize xsputn(const char_type* __s, streamsize __n);
      |                        ^
In file included from stanExports_mvmrivw.cc:5:
In file included from ./stanExports_mvmrivw.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:21:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
   70 |       virtual std::streamsize xsputn(const char_type* s, int n) {
      |                               ^
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/c++/v1/streambuf:295:24: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
  295 |     virtual streamsize xsputn(const char_type* __s, streamsize __n);
      |                        ^
In file included from stanExports_mvmrivw.cc:5:
In file included from ./stanExports_mvmrivw.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
   72 |                         Index replacements = 0;
      |                               ^
In file included from stanExports_mvmrivw.cc:5:
In file included from ./stanExports_mvmrivw.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  246 |   int count = 0;
      |       ^
In file included from stanExports_mvmrivw.cc:5:
In file included from ./stanExports_mvmrivw.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:43:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct
In file included from stanExports_mrivw.cc:5:
In file included from ./stanExports_mrivw.h:In file included from stanExports_mregger.cc:5:
In file included from ./stanExports_mregger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
: 1252 |    4:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:1252: in9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
 1252 |    t r inet = st ret = tan::sstaervices::error_codn::es::CONFIG;
      |         ^
services::error_codes::CONFIG;
      |         ^
In file included from stanExports_mrivw.cc:5:
./stanExports_mrivw.h:229:20: warning: unused variable 'jacobian__' [-Wunused-variable]
  229 |     constexpr bool jacobian__ = false;
      |                    ^~~~~~~~~~
./stanExports_mrivw.h:265:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
  265 |       int pos__ = std::numeric_limits<int>::min();
      |           ^
./stanExports_mrivw.h:289:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
  289 |       int pos__ = std::numeric_limits<int>::min();
      |           ^
In file included from stanExports_mregger.cc:5:
./stanExports_mregger.h:402:20: warning: unused variable 'jacobian__' [-Wunused-variable]
  402 |     constexpr bool jacobian__ = false;
      |                    ^~~~~~~~~~
./stanExports_mregger.h:487:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
  487 |       int pos__ = std::numeric_limits<int>::min();
      |           ^
./stanExports_mregger.h:525:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
  525 |       int pos__ = std::numeric_limits<int>::min();
      |           ^
In file included from stanExports_mrradialegger.cc:5:
In file included from ./stanExports_mrradialegger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
 1252 |     int ret = stan::services::error_codes::CONFIG;
      |         ^
In file included from stanExports_mrradialegger.cc:5:
./stanExports_mrradialegger.h:370:20: warning: unused variable 'jacobian__' [-Wunused-variable]
  370 |     constexpr bool jacobian__ = false;
      |                    ^~~~~~~~~~
./stanExports_mrradialegger.h:455:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
  455 |       int pos__ = std::numeric_limits<int>::min();
      |           ^
./stanExports_mrradialegger.h:493:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
  493 |       int pos__ = std::numeric_limits<int>::min();
      |           ^
In file included from stanExports_mvmregger.cc:5:
In file included from ./stanExports_mvmregger.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
 1252 |     int ret = stan::services::error_codes::CONFIG;
      |         ^
In file included from stanExports_mvmregger.cc:5:
./stanExports_mvmregger.h:337:20: warning: unused variable 'jacobian__' [-Wunused-variable]
  337 |     constexpr bool jacobian__ = false;
      |                    ^~~~~~~~~~
./stanExports_mvmregger.h:383:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
  383 |       int pos__ = std::numeric_limits<int>::min();
      |           ^
In file included from stanExports_mvmrivw.cc:5:
In file included from ./stanExports_mvmrivw.h:23:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/rstaninc.hpp:4:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
 1252 |     int ret = stan::services::error_codes::CONFIG;
      |         ^
In file included from stanExports_mvmrivw.cc:5:
./stanExports_mvmrivw.h:250:20: warning: unused variable 'jacobian__' [-Wunused-variable]
  250 |     constexpr bool jacobian__ = false;
      |                    ^~~~~~~~~~
./stanExports_mvmrivw.h:288:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable]
  288 |       int pos__ = std::numeric_limits<int>::min();
      |           ^
12 warnings generated.
11 warnings generated.
12 warnings generated.
11 warnings generated.
12 warnings generated.
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o mrbayes.so RcppExports.o stanExports_mregger.o stanExports_mrivw.o stanExports_mrradialegger.o stanExports_mvmregger.o stanExports_mvmrivw.o -L/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/lib -ltbb -ltbbmalloc -L/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/lib/ -Wl,-rpath,/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppParallel/lib/ -ltbb -ltbbmalloc -F/Library/Frameworks/R.framework/.. -framework R
ld: warning: ignoring duplicate libraries: '-ltbb', '-ltbbmalloc'
installing to /Volumes/Builds/packages/sonoma-arm64/results/4.6/mrbayes.Rcheck/00LOCK-mrbayes/00new/mrbayes/libs
** generating debug symbols (dSYM)
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mrbayes)