* installing *source* package ‘SmoothHazard’ ...
** this is package ‘SmoothHazard’ version ‘2024.04.10’
** package ‘SmoothHazard’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using Fortran compiler: ‘GNU Fortran (GCC) 14.2.0’
using SDK: ‘MacOSX11.3.sdk’
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c commun.f90 -o commun.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c optim.f90 -o optim.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c recKappa.f90 -o recKappa.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c bgos.f90 -o bgos.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c cdfnor.f90 -o cdfnor.o
cdfnor.f90:102:20:
102 | implicit none
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
cdfnor.f90:165:65:
165 | IF (.NOT. (abs(((pq)-0.5D0)-0.5D0).GT.(3.0D0*spmpar(1)))) GO TO 140
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c distance.f90 -o distance.o
distance.f90:319:2:
319 | use commun,only:iconf,level
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:327:2:
327 | quantile,P,bound,m,sd
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:400:5:
400 | if (iconf.eq.1) then
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:401:2:
401 | P = level + (1-level)/2
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:402:2:
402 | m = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:403:2:
403 | sd = 1
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:404:2:
404 | call cdfnor(2, P, 1-P, quantile, m, sd, s, bound)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:405:11:
405 | call conf(x,j,n,y,pm,zi)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:406:11:
406 | binf = dexp(-gl + quantile*pm)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:407:11:
407 | bsup = dexp(-gl - quantile*pm)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:408:11:
408 | call conf1(x,j,n,y,pm,zi)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:409:11:
409 | lbinf = lam - quantile*pm
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:410:11:
410 | lbsup = lam + quantile*pm
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:411:2:
411 | else
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:412:2:
412 | binf=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:413:2:
413 | bsup=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:414:2:
414 | lbinf=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:415:2:
415 | lbsup=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:416:2:
416 | end if
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c estimv.f90 -o estimv.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c fonct.f90 -o fonct.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c idmLikelihood.f90 -o idmLikelihood.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c idmPl.f90 -o idmPl.o
idmPl.f90:37:2:
37 | conf_bands,level_conf,CVcrit,mdf,theta01,theta02,theta12,prt,hess_tot)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmPl.f90:54:2:
54 | double precision,intent(in)::level_conf
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmPl.f90:114:2:
114 | iconf = conf_bands
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmPl.f90:115:2:
115 | level = level_conf
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmPl.f90:50:70:
50 | double precision::min,max,maxt1,estimv,maxt2,maxt3,mint1,mint2,mint3,ca,cb,dd,res
| 1
Warning: Unused variable 'mint2' declared at (1) [-Wunused-variable]
idmPl.f90:50:76:
50 | double precision::min,max,maxt1,estimv,maxt2,maxt3,mint1,mint2,mint3,ca,cb,dd,res
| 1
Warning: Unused variable 'mint3' declared at (1) [-Wunused-variable]
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c idmPlLikelihood.f90 -o idmPlLikelihood.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c idmPlLikelihood2.f90 -o idmPlLikelihood2.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c idmPlLikelihood0.f90 -o idmPlLikelihood0.o
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c runiran.c -o runiran.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c idmWeib.f90 -o idmWeib.o
idmWeib.f90:11:2:
11 | ,level_conf,prt,hess_tot)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:21:2:
21 | double precision,intent(in)::level_conf
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:81:2:
81 | iconf = conf_bands
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:307:2:
307 | if (iconf.eq.1)then
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:308:2:
308 | alpha = 1 - level_conf
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:391:2:
391 | else
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:392:2:
392 | a01_l=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:393:2:
393 | a01_u=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:394:2:
394 | a02_l=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:395:2:
395 | a02_u=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:396:2:
396 | a12_l=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:397:2:
397 | a12_u=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:398:2:
398 | end if
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:45:54:
45 | double precision,dimension(2000,99)::mate_ri01,mate_ri02,mate_ri12
| 1
Warning: Array 'mate_ri01' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
idmWeib.f90:45:64:
45 | double precision,dimension(2000,99)::mate_ri01,mate_ri02,mate_ri12
| 1
Warning: Array 'mate_ri02' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
idmWeib.f90:45:74:
45 | double precision,dimension(2000,99)::mate_ri01,mate_ri02,mate_ri12
| 1
Warning: Array 'mate_ri12' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c qgauss1.f90 -o qgauss1.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c survLikelihood.f90 -o survLikelihood.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c survPl.f90 -o survPl.o
survPl.f90:74:2:
74 | iconf = conf_bands
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survPl.f90:75:2:
75 | level = level_conf
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survPl.f90:33:56:
33 | integer::npar,nvat,j,k,ii,i,ic,ier,interval,irep,truncated,maxiter0,nva
| 1
Warning: Unused variable 'irep' declared at (1) [-Wunused-variable]
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c survPlLikelihood.f90 -o survPlLikelihood.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c survWeib.f90 -o survWeib.o
survWeib.f90:8:2:
8 | level_conf,prt,hess_tot)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:19:2:
19 | double precision,intent(in)::level_conf
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:64:2:
64 | iconf = conf_bands
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:317:2:
317 | if (iconf.eq.1)then
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:318:2:
318 | alpha = 1 - level_conf
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:319:2:
319 | icut = nint(alpha/2*2000 + 1)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:439:2:
439 | else
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:440:2:
440 | S_l=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:441:2:
441 | S_u=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:442:2:
442 | h_l=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:443:2:
443 | h_u=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:444:2:
444 | end if
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:40:61:
40 | double precision,dimension(2000,100)::mate_su,mate_ri
| 1
Warning: Array 'mate_ri' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
survWeib.f90:40:53:
40 | double precision,dimension(2000,100)::mate_su,mate_ri
| 1
Warning: Array 'mate_su' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c tri.f90 -o tri.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c useSurv.f90 -o useSurv.o
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c init.c -o init.o
clang -arch arm64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o SmoothHazard.so commun.o optim.o recKappa.o bgos.o cdfnor.o distance.o estimv.o fonct.o idmLikelihood.o idmPl.o idmPlLikelihood.o idmPlLikelihood2.o idmPlLikelihood0.o idmWeib.o qgauss1.o survLikelihood.o survPl.o survPlLikelihood.o survWeib.o tri.o useSurv.o init.o runiran.o -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R
ld: warning: could not create compact unwind for ___reckappa_MOD_sub_rec: does not use standard frame
ld: warning: could not create compact unwind for _stvaln_: does not use standard frame
ld: warning: could not create compact unwind for _cumnor_: does not use standard frame
ld: warning: could not create compact unwind for _conf1_: does not use standard frame
ld: warning: could not create compact unwind for _conf_: does not use standard frame
ld: warning: could not create compact unwind for _cosp_: does not use standard frame
ld: warning: could not create compact unwind for _distance_: does not use standard frame
ld: warning: could not create compact unwind for _distancesurv_: does not use standard frame
ld: warning: could not create compact unwind for _susp_: does not use standard frame
ld: warning: could not create compact unwind for _calcomeg_: does not use standard frame
ld: warning: could not create compact unwind for _idmpl_: does not use standard frame
ld: warning: could not create compact unwind for _qgausspl_: does not use standard frame
ld: warning: could not create compact unwind for _isp_: does not use standard frame
ld: warning: could not create compact unwind for _qgauss12_: does not use standard frame
ld: warning: could not create compact unwind for _qgauss13_: does not use standard frame
ld: warning: could not create compact unwind for _idmpllikelihood_: does not use standard frame
ld: warning: could not create compact unwind for _idmpllikelihood2_: does not use standard frame
ld: warning: could not create compact unwind for _idmpllikelihood0_: does not use standard frame
ld: warning: could not create compact unwind for _idmweib_: does not use standard frame
ld: warning: could not create compact unwind for _survlikelihood_: does not use standard frame
ld: warning: could not create compact unwind for _survpl_: does not use standard frame
ld: warning: could not create compact unwind for _survpllikelihood_: does not use standard frame
ld: warning: could not create compact unwind for _survweib_: does not use standard frame
ld: warning: could not create compact unwind for _mat_: does not use standard frame
ld: warning: could not create compact unwind for _golden_: does not use standard frame
ld: warning: could not create compact unwind for _test_: does not use standard frame
ld: warning: could not create compact unwind for ___emutls_get_address: does not use standard frame
ld: warning: could not create compact unwind for _allocate_tramp_ctrl: does not use standard frame
ld: warning: could not create compact unwind for ___gcc_nested_func_ptr_created: does not use standard frame
ld: warning: could not create compact unwind for ___gcc_nested_func_ptr_deleted: does not use standard frame
ld: warning: could not create compact unwind for _bgos_: does not use standard frame
ld: warning: could not create compact unwind for _cdfnor_: does not use standard frame
ld: warning: could not create compact unwind for _estimv_: does not use standard frame
ld: warning: could not create compact unwind for _estimvsurv_: does not use standard frame
ld: warning: could not create compact unwind for _idmlikelihood_: does not use standard frame
ld: warning: could not create compact unwind for ___optim_MOD_dchole: does not use standard frame
ld: warning: could not create compact unwind for ___optim_MOD_searpas: does not use standard frame
ld: warning: could not create compact unwind for ___optim_MOD_deriva: does not use standard frame
ld: warning: could not create compact unwind for ___optim_MOD_marq98: does not use standard frame
installing to /Volumes/Builds/packages/big-sur-arm64/results/4.5/SmoothHazard.Rcheck/00LOCK-SmoothHazard/00new/SmoothHazard/libs
** generating debug symbols (dSYM)
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SmoothHazard)