* installing *source* package ‘ShrinkageTrees’ ...
** this is package ‘ShrinkageTrees’ version ‘2.0.2’
** package ‘ShrinkageTrees’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 17.0.0 (clang-1700.3.19.1)’
using SDK: ‘MacOSX14.5.sdk’
clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c CausalHorseForest.cpp -o CausalHorseForest.o
clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c Forest.cpp -o Forest.o
clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c Functions.cpp -o Functions.o
clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c HorseTrees.cpp -o HorseTrees.o
clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c Information.cpp -o Information.o
clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c OuterGibbsFunctions.cpp -o OuterGibbsFunctions.o
In file included from Information.cpp:1:
In file included from ./Information.h:26:
In file included from ./Parameters.h:16:
In file included from ./Prerequisites.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include/Rcpp.h:49:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include/Rcpp/Function.h:75:65: error: use of undeclared identifier 'R_NamespaceRegistry'
75 | Shield<SEXP> env(R_getVarEx(Rf_install(ns.c_str()), R_NamespaceRegistry, FALSE, R_UnboundValue));
| ^
In file included from OuterGibbsFunctions.cpp:1:
In file included from ./OuterGibbsFunctions.h:4:
In file included from ./Forest.h:58:
In file included from ./TreeModifications.h:11:
In file included from ./Functions.h:11:
In file included from ./Tree.h:19:
In file included from ./ScaleMixture.h:81:
In file included from ./Information.h:26:
In file included from ./Parameters.h:16:
In file included from ./Prerequisites.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include/Rcpp.h:49:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include/Rcpp/Function.h:75:65: error: use of undeclared identifier 'R_NamespaceRegistry'
75 | Shield<SEXP> env(R_getVarEx(Rf_install(ns.c_str()), R_NamespaceRegistry, FALSE, R_UnboundValue));
| ^
In file included from HorseTrees.cpp:1:
In file included from ./HorseTrees.h:4:
In file included from ./Forest.h:58:
In file included from ./TreeModifications.h:11:
In file included from ./Functions.h:11:
In file included from ./Tree.h:19:
In file included from ./ScaleMixture.h:81:
In file included from ./Information.h:26:
In file included from ./Parameters.h:16:
In file included from ./Prerequisites.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include/Rcpp.h:49:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include/Rcpp/Function.h:75:65: error: use of undeclared identifier 'R_NamespaceRegistry'
75 | Shield<SEXP> env(R_getVarEx(Rf_install(ns.c_str()), R_NamespaceRegistry, FALSE, R_UnboundValue));
| ^
In file included from Forest.cpp:1:
In file included from ./Forest.h:58:
In file included from ./TreeModifications.h:11:
In file included from ./Functions.h:11:
In file included from ./Tree.h:19:
In file included from ./ScaleMixture.h:81:
In file included from ./Information.h:26:
In file included from ./Parameters.h:16:
In file included from ./Prerequisites.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include/Rcpp.h:49:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include/Rcpp/Function.h:75:65: error: use of undeclared identifier 'R_NamespaceRegistry'
75 | Shield<SEXP> env(R_getVarEx(Rf_install(ns.c_str()), R_NamespaceRegistry, FAIn file included from Functions.cpp:LSE, R_UnboundValue));
1:
In file included from ./Functions.h:11:
In file included from ./Tree.h:19:
| ^
In file included from ./ScaleMixture.h:81:
In file included from ./Information.h:26:
In file included from ./Parameters.h:16:
In file included from ./Prerequisites.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include/Rcpp.h:49:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include/Rcpp/Function.h:75:65: error: use of undeclared identifier 'R_NamespaceRegistry'
75 | Shield<SEXP> env(R_getVarEx(Rf_install(ns.c_str()), R_NamespaceRegistry, FALSE, R_UnboundValue));
| ^
In file included from CausalHorseForest.cpp:1:
In file included from ./CausalHorseForest.h:4:
In file included from ./HorseTrees.h:4:
In file included from ./Forest.h:58:
In file included from ./TreeModifications.h:11:
In file included from ./Functions.h:11:
In file included from ./Tree.h:19:
In file included from ./ScaleMixture.h:81:
In file included from ./Information.h:26:
In file included from ./Parameters.h:16:
In file included from ./Prerequisites.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include/Rcpp.h:49:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include/Rcpp/Function.h:75:65: error: use of undeclared identifier 'R_NamespaceRegistry'
75 | Shield<SEXP> env(R_getVarEx(Rf_install(ns.c_str()), R_NamespaceRegistry, FALSE, R_UnboundValue));
| ^
HorseTrees.cpp:91:11: warning: unused variable 'y_observed' [-Wunused-variable]
91 | double* y_observed = y_observed_vector.data(); // Get pointer to use like an array
| ^~~~~~~~~~
HorseTrees.cpp:204:10: warning: unused variable 'forestwide_shrinkage' [-Wunused-variable]
204 | double forestwide_shrinkage = 1.0;
| ^~~~~~~~~~~~~~~~~~~~
HorseTrees.cpp:205:10: warning: unused variable 'forestwide_auxiliary' [-Wunused-variable]
205 | double forestwide_auxiliary = 1.0;
| ^~~~~~~~~~~~~~~~~~~~
CausalHorseForest.cpp:84:11: warning: unused variable 'y_observed' [-Wunused-variable]
84 | double* y_observed = y_observed_vector.data(); // Get pointer to use like an array
| ^~~~~~~~~~
CausalHorseForest.cpp:265:10: warning: unused variable 'forestwide_auxiliary_control' [-Wunused-variable]
265 | double forestwide_auxiliary_control = 1.0;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
CausalHorseForest.cpp:266:10: warning: unused variable 'forestwide_auxiliary_treat' [-Wunused-variable]
266 | double forestwide_auxiliary_treat = 1.0;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
1 error generated.
make: *** [OuterGibbsFunctions.o] Error 1
make: *** Waiting for unfinished jobs....
1 error generated.
3 warnings and 1 error generated.
make: *** [Forest.o] Error 1
make: *** [HorseTrees.o] Error 1
1 error generated.
make: *** [Information.o] Error 1
3 warnings and 1 error generated.
make: *** [CausalHorseForest.o] Error 1
1 error generated.
make: *** [Functions.o] Error 1
ERROR: compilation failed for package ‘ShrinkageTrees’
* removing ‘/Volumes/Builds/packages/sonoma-arm64/results/4.6/ShrinkageTrees.Rcheck/ShrinkageTrees’