- using R version 4.6.0 alpha (2026-03-26 r89725)
- using platform: aarch64-apple-darwin23
- R was compiled by
Apple clang version 17.0.0 (clang-1700.3.19.1)
GNU Fortran (GCC) 14.2.0
- running under: macOS Sequoia 15.7.1
- using session charset: UTF-8
* current time: 2026-03-28 03:30:57 UTC
- checking for file ‘DeSciDe/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘DeSciDe’ version ‘1.0.2’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘DeSciDe’ can be installed ... [5s/5s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the package can be unloaded cleanly ... [1s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
- checking loading without being on the library search path ... [1s/1s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [3s/3s] OK
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [2s/24s] ERROR
Running examples in ‘DeSciDe-Ex.R’ failed
The error most likely occurred in:
> ### Name: plot_string_network
> ### Title: Plot STRING Network
> ### Aliases: plot_string_network
>
> ### ** Examples
>
> library(STRINGdb)
> string_db <- STRINGdb$new(species = 9606)
WARNING: Score threshold is not specified. We will be using medium stringency cut-off of 400.
WARNING: You didn't specify a version of the STRING database to use. Hence we will use STRING 12.0
> string_ids <- c("9606.ENSP00000269305", "9606.ENSP00000357940")
> plot_string_network(string_db, string_ids, file_directory = tempdir(), export = FALSE)
Error in readPNG(postFormSmart(urlStr, .params = params, .ctype = "raw")) :
libpng error: Not a PNG file
Calls: plot_string_network -> <Anonymous> -> get_png -> readPNG
Execution halted
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [2s/2s] OK
Running ‘testthat.R’ [2s/2s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [7s/7s] OK
- checking PDF version of manual ... [2s/2s] OK
- DONE
Status: 1 ERROR
- using check arguments '--no-clean-on-error '