* installing *source* package ‘CCMnet’ ...
** this is package ‘CCMnet’ version ‘0.1.4’
** package ‘CCMnet’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘Apple clang version 17.0.0 (clang-1700.3.19.1)’
using SDK: ‘MacOSX14.5.sdk’
clang -arch arm64 -std=gnu23 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c CCMnet_netprop_degdist.c -o CCMnet_netprop_degdist.o
clang -arch arm64 -std=gnu23 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c CCMnet_netprop_degmixing.c -o CCMnet_netprop_degmixing.o
clang -arch arm64 -std=gnu23 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c CCMnet_netprop_degmixing_clustering.c -o CCMnet_netprop_degmixing_clustering.o
clang -arch arm64 -std=gnu23 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c CCMnet_netprop_edges.c -o CCMnet_netprop_edges.o
clang -arch arm64 -std=gnu23 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c CCMnet_netprop_mixing.c -o CCMnet_netprop_mixing.o
clang -arch arm64 -std=gnu23 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c CCMnet_netprop_mixing_degdist.c -o CCMnet_netprop_mixing_degdist.o
clang -arch arm64 -std=gnu23 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c MCMC.c -o MCMC.o
CCMnet_netprop_mixing_degdist.c:28:9: warning: variable 'nnodes_type1' set but not used [-Wunused-but-set-variable]
28 | int nnodes_type1 = 0, nnodes_type2 = 0;
| ^
CCMnet_netprop_mixing_degdist.c:28:27: warning: variable 'nnodes_type2' set but not used [-Wunused-but-set-variable]
28 | int nnodes_type1 = 0, nnodes_type2 = 0;
| ^
CCMnet_netprop_mixing.c:72:7: warning: unused variable 'counter' [-Wunused-variable]
72 | int counter, Cov_type;
| ^~~~~~~
CCMnet_netprop_mixing.c:72:16: warning: unused variable 'Cov_type' [-Wunused-variable]
72 | int counter, Cov_type;
| ^~~~~~~~
CCMnet_netprop_mixing.c:83:7: warning: unused variable 'k' [-Wunused-variable]
83 | int k = (int)((sqrt(8.0 * num_params + 1.0) - 1.0) / 2.0 + 0.1);
| ^
CCMnet_netprop_mixing.c:148:7: warning: unused variable 'counter' [-Wunused-variable]
148 | int counter, Cov_type;
| ^~~~~~~
CCMnet_netprop_mixing.c:148:16: warning: unused variable 'Cov_type' [-Wunused-variable]
148 | int counter, Cov_type;
| ^~~~~~~~
clang -arch arm64 -std=gnu23 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c MHproposal.c -o MHproposal.o
5 warnings generated.
clang -arch arm64 -std=gnu23 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c MHproposals.c -o MHproposals.o
clang -arch arm64 -std=gnu23 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c MHproposals_bipartite.c -o MHproposals_bipartite.o
clang -arch arm64 -std=gnu23 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c changestat.c -o changestat.o
In file included from MCMC.c:13:
./MCMC_prob.h:891:18: warning: unused variable 'num_Tri' [-Wunused-variable]
891 | double num_Tri = networkstatistics[m->n_stats-1]; //should be last statistic
| ^~~~~~~
./MCMC_prob.h:892:18: warning: unused variable 'num_Tri_change' [-Wunused-variable]
892 | double num_Tri_change = fabs(m->workspace[m->n_stats-1]); //should be last statistic
| ^~~~~~~~~~~~~~
./MCMC_prob.h:138:7: warning: unused variable 'counter1' [-Wunused-variable]
138 | int counter1;
| ^~~~~~~~
./MCMC_prob.h:139:7: warning: unused variable 'counter2' [-Wunused-variable]
139 | int counter2;
| ^~~~~~~~
./MCMC_prob.h:141:10: warning: unused variable 'nwp_density' [-Wunused-variable]
141 | double nwp_density;
| ^~~~~~~~~~~
./MCMC_prob.h:142:10: warning: unused variable 'MHp_density' [-Wunused-variable]
142 | double MHp_density;
| ^~~~~~~~~~~
2 warnings generated.
clang -arch arm64 -std=gnu23 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c changestats.c -o changestats.o
MHproposals.c:1041:36: warning: variable 'ndyad' set but not used [-Wunused-but-set-variable]
1041 | int noutedge=0, ninedge=0, k0=0, ndyad, fvalid=0, k;
| ^
clang -arch arm64 -std=gnu23 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c edgelist.c -o edgelist.o
changestats.c:657:3: warning: variable 't210' set but not used [-Wunused-but-set-variable]
657 | t210, t120C, t120U, t120D, t201, t030C, t030T, t111U,
| ^
changestats.c:657:9: warning: variable 't120C' set but not used [-Wunused-but-set-variable]
657 | t210, t120C, t120U, t120D, t201, t030C, t030T, t111U,
| ^
changestats.c:657:16: warning: variable 't120U' set but not used [-Wunused-but-set-variable]
657 | t210, t120C, t120U, t120D, t201, t030C, t030T, t111U,
| ^
changestats.c:657:23: warning: variable 't120D' set but not used [-Wunused-but-set-variable]
657 | t210, t120C, t120U, t120D, t201, t030C, t030T, t111U,
| ^
changestats.c:657:30: warning: variable 't201' set but not used [-Wunused-but-set-variable]
657 | t210, t120C, t120U, t120D, t201, t030C, t030T, t111U,
| ^
changestats.c:657:36: warning: variable 't030C' set but not used [-Wunused-but-set-variable]
657 | t210, t120C, t120U, t120D, t201, t030C, t030T, t111U,
| ^
changestats.c:657:43: warning: variable 't030T' set but not used [-Wunused-but-set-variable]
657 | t210, t120C, t120U, t120D, t201, t030C, t030T, t111U,
| ^
changestats.c:657:50: warning: variable 't111U' set but not used [-Wunused-but-set-variable]
657 | t210, t120C, t120U, t120D, t201, t030C, t030T, t111U,
| ^
changestats.c:658:3: warning: variable 't111D' set but not used [-Wunused-but-set-variable]
658 | t111D, t021C, t021U, t021D, t102, t012; /* , t003; */
| ^
changestats.c:658:10: warning: variable 't021C' set but not used [-Wunused-but-set-variable]
658 | t111D, t021C, t021U, t021D, t102, t012; /* , t003; */
| ^
changestats.c:658:17: warning: variable 't021U' set but not used [-Wunused-but-set-variable]
658 | t111D, t021C, t021U, t021D, t102, t012; /* , t003; */
| ^
changestats.c:658:24: warning: variable 't021D' set but not used [-Wunused-but-set-variable]
658 | t111D, t021C, t021U, t021D, t102, t012; /* , t003; */
| ^
clang -arch arm64 -std=gnu23 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c edgetree.c -o edgetree.o
clang -arch arm64 -std=gnu23 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c init.c -o init.o
clang -arch arm64 -std=gnu23 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c model.c -o model.o
1 warning generated.
6 warnings generated.
12 warnings generated.
clang -arch arm64 -std=gnu23 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o CCMnet.so CCMnet_netprop_degdist.o CCMnet_netprop_degmixing.o CCMnet_netprop_degmixing_clustering.o CCMnet_netprop_edges.o CCMnet_netprop_mixing.o CCMnet_netprop_mixing_degdist.o MCMC.o MHproposal.o MHproposals.o MHproposals_bipartite.o changestat.o changestats.o edgelist.o edgetree.o init.o model.o -F/Library/Frameworks/R.framework/.. -framework R
installing to /Volumes/Builds/packages/sonoma-arm64/results/4.6/CCMnet.Rcheck/00LOCK-CCMnet/00new/CCMnet/libs
** generating debug symbols (dSYM)
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (CCMnet)