- using R Under development (unstable) (2025-11-24 r89059)
- using platform: aarch64-apple-darwin23
- R was compiled by
Apple clang version 17.0.0 (clang-1700.3.19.1)
GNU Fortran (GCC) 14.2.0
- running under: macOS Sequoia 15.7.1
- using session charset: UTF-8
- checking for file ‘AnimalHabitatNetwork/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘AnimalHabitatNetwork’ version ‘0.1.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
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- checking for hidden files and directories ... OK
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- checking for sufficient/correct file permissions ... OK
- checking whether package ‘AnimalHabitatNetwork’ can be installed ... [2s/2s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... NOTE
Problems with news in ‘NEWS.md’:
No news entries found.
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
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- checking loading without being on the library search path ... [0s/0s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [1s/1s] OK
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- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... [0s/0s] ERROR
Running examples in ‘AnimalHabitatNetwork-Ex.R’ failed
The error most likely occurred in:
> ### Name: ahn_gen
> ### Title: Generate networks characterising habitat physical configurations
> ### Aliases: ahn_gen
>
> ### ** Examples
>
> # generate a connected and weighted network
> ahn_gen(N = 10, L = 5, mu = 1, lamda = 5)
Error in `graph_from_adjacency_matrix()`:
! Cannot create a graph object because the adjacency matrix contains
NAs.
Backtrace:
▆
1. └─AnimalHabitatNetwork::ahn_gen(N = 10, L = 5, mu = 1, lamda = 5)
2. └─igraph::graph_from_adjacency_matrix(ahn_wei_matrix, mode = "undirected", diag = FALSE, weighted = TRUE)
3. └─igraph:::ensure_no_na(adjmatrix, "adjacency matrix")
4. └─cli::cli_abort(...)
5. └─rlang::abort(...)
Execution halted
- checking PDF version of manual ... [1s/1s] OK
- DONE
Status: 1 ERROR, 1 NOTE
- using check arguments '--no-clean-on-error '