* installing *source* package ‘yaleBraille’ ...
** this is package ‘yaleBraille’ version ‘0.2.2’
** package ‘yaleBraille’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2)’
make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-devel/yaleBraille/src'
gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -I./liblouis -I/data/localhost/ripley/R/R-devel/include -DPACKAGE_NAME="liblouis" -DPACKAGE_STRING='"liblouis 3.38.0"' -DPACKAGE_VERSION="3.38.0" -D_FORTIFY_SOURCE=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c liblouis/commonTranslationFunctions.c -o liblouis/commonTranslationFunctions.o
gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -I./liblouis -I/data/localhost/ripley/R/R-devel/include -DPACKAGE_NAME="liblouis" -DPACKAGE_STRING='"liblouis 3.38.0"' -DPACKAGE_VERSION="3.38.0" -D_FORTIFY_SOURCE=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c liblouis/compileTranslationTable.c -o liblouis/compileTranslationTable.o
gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -I./liblouis -I/data/localhost/ripley/R/R-devel/include -DPACKAGE_NAME="liblouis" -DPACKAGE_STRING='"liblouis 3.38.0"' -DPACKAGE_VERSION="3.38.0" -D_FORTIFY_SOURCE=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c liblouis/lou_translateString.c -o liblouis/lou_translateString.o
gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -I./liblouis -I/data/localhost/ripley/R/R-devel/include -DPACKAGE_NAME="liblouis" -DPACKAGE_STRING='"liblouis 3.38.0"' -DPACKAGE_VERSION="3.38.0" -D_FORTIFY_SOURCE=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c liblouis/lou_backTranslateString.c -o liblouis/lou_backTranslateString.o
gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -I./liblouis -I/data/localhost/ripley/R/R-devel/include -DPACKAGE_NAME="liblouis" -DPACKAGE_STRING='"liblouis 3.38.0"' -DPACKAGE_VERSION="3.38.0" -D_FORTIFY_SOURCE=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c liblouis/logging.c -o liblouis/logging.o
gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -I./liblouis -I/data/localhost/ripley/R/R-devel/include -DPACKAGE_NAME="liblouis" -DPACKAGE_STRING='"liblouis 3.38.0"' -DPACKAGE_VERSION="3.38.0" -D_FORTIFY_SOURCE=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c liblouis/metadata.c -o liblouis/metadata.o
gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -I./liblouis -I/data/localhost/ripley/R/R-devel/include -DPACKAGE_NAME="liblouis" -DPACKAGE_STRING='"liblouis 3.38.0"' -DPACKAGE_VERSION="3.38.0" -D_FORTIFY_SOURCE=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c liblouis/pattern.c -o liblouis/pattern.o
gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -I./liblouis -I/data/localhost/ripley/R/R-devel/include -DPACKAGE_NAME="liblouis" -DPACKAGE_STRING='"liblouis 3.38.0"' -DPACKAGE_VERSION="3.38.0" -D_FORTIFY_SOURCE=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c liblouis/utils.c -o liblouis/utils.o
gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -I./liblouis -I/data/localhost/ripley/R/R-devel/include -DPACKAGE_NAME="liblouis" -DPACKAGE_STRING='"liblouis 3.38.0"' -DPACKAGE_VERSION="3.38.0" -D_FORTIFY_SOURCE=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c wrapper.c -o wrapper.o
gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -I./liblouis -I/data/localhost/ripley/R/R-devel/include -DPACKAGE_NAME="liblouis" -DPACKAGE_STRING='"liblouis 3.38.0"' -DPACKAGE_VERSION="3.38.0" -D_FORTIFY_SOURCE=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c init.c -o init.o
<command-line>: warning: ‘_FORTIFY_SOURCE’ redefined
<command-line>: note: this is the location of the previous definition
<command-line>: warning: ‘_FORTIFY_SOURCE’ redefined
<command-line>: note: this is the location of the previous definition
In file included from liblouis/compileTranslationTable.c:32:
liblouis/config.h:648:9: warning: ‘PACKAGE_NAME’ redefined
648 | #define PACKAGE_NAME "Liblouis"
| ^~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
liblouis/config.h:660:9: warning: ‘PACKAGE_STRING’ redefined
660 | #define PACKAGE_STRING "Liblouis 3.38.0"
| ^~~~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
liblouis/config.h:669:9: warning: ‘PACKAGE_VERSION’ redefined
669 | #define PACKAGE_VERSION "3.38.0"
| ^~~~~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
In file included from liblouis/commonTranslationFunctions.c:27:
liblouis/config.h:648:9: warning: ‘PACKAGE_NAME’ redefined
648 | #define PACKAGE_NAME "Liblouis"
| ^~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
liblouis/config.h:660:9: warning: ‘PACKAGE_STRING’ redefined
660 | #define PACKAGE_STRING "Liblouis 3.38.0"
| ^~~~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
liblouis/config.h:669:9: warning: ‘PACKAGE_VERSION’ redefined
669 | #define PACKAGE_VERSION "3.38.0"
| ^~~~~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
<command-line>: warning: ‘_FORTIFY_SOURCE’ redefined
<command-line>: note: this is the location of the previous definition
In file included from liblouis/logging.c:27:
liblouis/config.h:648:9: warning: ‘PACKAGE_NAME’ redefined
648 | #define PACKAGE_NAME "Liblouis"
| ^~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
liblouis/config.h:660:9: warning: ‘PACKAGE_STRING’ redefined
660 | #define PACKAGE_STRING "Liblouis 3.38.0"
| ^~~~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
liblouis/config.h:669:9: warning: ‘PACKAGE_VERSION’ redefined
669 | #define PACKAGE_VERSION "3.38.0"
| ^~~~~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
<command-line>: warning: ‘_FORTIFY_SOURCE’ redefined
<command-line>: note: this is the location of the previous definition
<command-line>: warning: ‘_FORTIFY_SOURCE’ redefined
<command-line>: note: this is the location of the previous definition
<command-line>: warning: ‘_FORTIFY_SOURCE’ redefined
<command-line>: note: this is the location of the previous definition
<command-line>: warning: ‘_FORTIFY_SOURCE’ redefined
<command-line>: note: this is the location of the previous definition
In file included from liblouis/lou_translateString.c:32:
liblouis/config.h:648:9: warning: ‘PACKAGE_NAME’ redefined
648 | #define PACKAGE_NAME "Liblouis"
| ^~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
liblouis/config.h:660:9: warning: ‘PACKAGE_STRING’ redefined
660 | #define PACKAGE_STRING "Liblouis 3.38.0"
| ^~~~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
liblouis/config.h:669:9: warning: ‘PACKAGE_VERSION’ redefined
669 | #define PACKAGE_VERSION "3.38.0"
| ^~~~~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
In file included from liblouis/utils.c:32:
liblouis/config.h:648:9: warning: ‘PACKAGE_NAME’ redefined
648 | #define PACKAGE_NAME "Liblouis"
| ^~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
liblouis/config.h:660:9: warning: ‘PACKAGE_STRING’ redefined
660 | #define PACKAGE_STRING "Liblouis 3.38.0"
| ^~~~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
liblouis/config.h:669:9: warning: ‘PACKAGE_VERSION’ redefined
669 | #define PACKAGE_VERSION "3.38.0"
| ^~~~~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
<command-line>: warning: ‘_FORTIFY_SOURCE’ redefined
<command-line>: note: this is the location of the previous definition
<command-line>: warning: ‘_FORTIFY_SOURCE’ redefined
<command-line>: note: this is the location of the previous definition
In file included from liblouis/pattern.c:21:
liblouis/config.h:648:9: warning: ‘PACKAGE_NAME’ redefined
648 | #define PACKAGE_NAME "Liblouis"
| ^~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
liblouis/config.h:660:9: warning: ‘PACKAGE_STRING’ redefined
660 | #define PACKAGE_STRING "Liblouis 3.38.0"
| ^~~~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
liblouis/config.h:669:9: warning: ‘PACKAGE_VERSION’ redefined
669 | #define PACKAGE_VERSION "3.38.0"
| ^~~~~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
<command-line>: warning: ‘_FORTIFY_SOURCE’ redefined
<command-line>: note: this is the location of the previous definition
In file included from liblouis/metadata.c:26:
liblouis/config.h:648:9: warning: ‘PACKAGE_NAME’ redefined
648 | #define PACKAGE_NAME "Liblouis"
| ^~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
liblouis/config.h:660:9: warning: ‘PACKAGE_STRING’ redefined
660 | #define PACKAGE_STRING "Liblouis 3.38.0"
| ^~~~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
liblouis/config.h:669:9: warning: ‘PACKAGE_VERSION’ redefined
669 | #define PACKAGE_VERSION "3.38.0"
| ^~~~~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
In file included from liblouis/lou_backTranslateString.c:30:
liblouis/config.h:648:9: warning: ‘PACKAGE_NAME’ redefined
648 | #define PACKAGE_NAME "Liblouis"
| ^~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
liblouis/config.h:660:9: warning: ‘PACKAGE_STRING’ redefined
660 | #define PACKAGE_STRING "Liblouis 3.38.0"
| ^~~~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
liblouis/config.h:669:9: warning: ‘PACKAGE_VERSION’ redefined
669 | #define PACKAGE_VERSION "3.38.0"
| ^~~~~~~~~~~~~~~
<command-line>: note: this is the location of the previous definition
liblouis/pattern.c:929:1: warning: ‘pattern_insert_alternate’ defined but not used [-Wunused-function]
929 | pattern_insert_alternate(const widechar *input, const int input_max, int *input_crs,
| ^~~~~~~~~~~~~~~~~~~~~~~~
liblouis/pattern.c:437:1: warning: ‘pattern_print’ defined but not used [-Wunused-function]
437 | pattern_print(const widechar *expr_data, const TranslationTableHeader *table) {
| ^~~~~~~~~~~~~
liblouis/pattern.c:315:1: warning: ‘pattern_output’ defined but not used [-Wunused-function]
315 | pattern_output(const widechar *expr_data, const TranslationTableHeader *table) {
| ^~~~~~~~~~~~~~
liblouis/lou_translateString.c: In function ‘resolveEmphasisPassages’:
liblouis/lou_translateString.c:2921:26: warning: variable ‘last_word_start’ set but not used [-Wunused-but-set-variable=]
2921 | int in_word = 0, last_word_start = -1, last_word_end = -1;
| ^~~~~~~~~~~~~~~
liblouis/lou_backTranslateString.c:1054:1: warning: ‘putCharacters’ defined but not used [-Wunused-function]
1054 | putCharacters(const widechar *characters, int count, const TranslationTableHeader *table,
| ^~~~~~~~~~~~~
liblouis/compileTranslationTable.c: In function ‘compileRule’:
liblouis/compileTranslationTable.c:2911:30: warning: unused variable ‘macro’ [-Wunused-variable]
2911 | const Macro *macro;
| ^~~~~
liblouis/compileTranslationTable.c: At top level:
liblouis/compileTranslationTable.c:2791:1: warning: ‘compileMacro’ defined but not used [-Wunused-function]
2791 | compileMacro(FileInfo *file, const Macro **macro) {
| ^~~~~~~~~~~~
liblouis/compileTranslationTable.c:2755:1: warning: ‘cons_macro’ defined but not used [-Wunused-function]
2755 | cons_macro(const Macro *head, const MacroList *tail) {
| ^~~~~~~~~~
In file included from /usr/include/string.h:580,
from liblouis/lou_backTranslateString.c:34:
In function ‘memcpy’,
inlined from ‘_lou_backTranslate’ at liblouis/lou_backTranslateString.c:311:4:
/usr/include/bits/string_fortified.h:29:10: warning: ‘posMapping3’ may be used uninitialized [-Wmaybe-uninitialized]
29 | return __builtin___memcpy_chk (__dest, __src, __len,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
30 | __glibc_objsize0 (__dest));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~
liblouis/lou_backTranslateString.c: In function ‘_lou_backTranslate’:
liblouis/lou_backTranslateString.c:203:14: note: ‘posMapping3’ was declared here
203 | int *posMapping3;
| ^~~~~~~~~~~
liblouis/lou_backTranslateString.c:305:31: warning: ‘realInlen’ may be used uninitialized [-Wmaybe-uninitialized]
305 | passPosMapping[realInlen] = output.length;
| ^
liblouis/lou_backTranslateString.c:282:21: note: ‘realInlen’ was declared here
282 | int realInlen;
| ^~~~~~~~~
In function ‘back_selectRule’,
inlined from ‘backTranslateString’ at liblouis/lou_backTranslateString.c:1233:3,
inlined from ‘_lou_backTranslate’ at liblouis/lou_backTranslateString.c:285:9:
liblouis/lou_backTranslateString.c:698:13: warning: ‘multindRule’ may be used uninitialized [-Wmaybe-uninitialized]
698 | if (handleMultind(table, currentDotslen, currentOpcode, currentRule, doingMultind,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
699 | *multindRule))
| ~~~~~~~~~~~~~
liblouis/lou_backTranslateString.c: In function ‘_lou_backTranslate’:
liblouis/lou_backTranslateString.c:1205:37: note: ‘multindRule’ was declared here
1205 | const TranslationTableRule *multindRule;
| ^~~~~~~~~~~
In file included from /usr/include/string.h:580,
from liblouis/lou_translateString.c:36:
In function ‘memcpy’,
inlined from ‘_lou_translate’ at liblouis/lou_translateString.c:1308:4:
/usr/include/bits/string_fortified.h:29:10: warning: ‘posMapping3’ may be used uninitialized [-Wmaybe-uninitialized]
29 | return __builtin___memcpy_chk (__dest, __src, __len,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
30 | __glibc_objsize0 (__dest));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~
liblouis/lou_translateString.c: In function ‘_lou_translate’:
liblouis/lou_translateString.c:1175:14: note: ‘posMapping3’ was declared here
1175 | int *posMapping3;
| ^~~~~~~~~~~
In function ‘translateString’,
inlined from ‘_lou_translate’ at liblouis/lou_translateString.c:1293:16:
liblouis/lou_translateString.c:3936:36: warning: ‘repwordStart’ may be used uninitialized [-Wmaybe-uninitialized]
3936 | if (posMapping[k] >= repwordStart) {
| ^
liblouis/lou_translateString.c: In function ‘_lou_translate’:
liblouis/lou_translateString.c:3631:13: note: ‘repwordStart’ was declared here
3631 | int repwordStart;
| ^~~~~~~~~~~~
liblouis/lou_translateString.c:1303:47: warning: ‘realInlen’ may be used uninitialized [-Wmaybe-uninitialized]
1303 | passPosMapping[output.length] = realInlen;
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
liblouis/lou_translateString.c:1281:21: note: ‘realInlen’ was declared here
1281 | int realInlen;
| ^~~~~~~~~
liblouis/lou_translateString.c: In function ‘lou_hyphenate’:
liblouis/lou_translateString.c:4126:29: warning: ‘inputPos’ may be used uninitialized [-Wmaybe-uninitialized]
4126 | int braillePos = inputPos[k];
| ^~~~~~~~~~
liblouis/lou_translateString.c:4062:14: note: ‘inputPos’ was declared here
4062 | int *inputPos;
| ^~~~~~~~
gcc -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/lib64 -o yaleBraille.so liblouis/commonTranslationFunctions.o liblouis/compileTranslationTable.o liblouis/lou_translateString.o liblouis/lou_backTranslateString.o liblouis/logging.o liblouis/metadata.o liblouis/pattern.o liblouis/utils.o wrapper.o init.o
make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-devel/yaleBraille/src'
make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-devel/yaleBraille/src'
make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-devel/yaleBraille/src'
installing to /data/localhost/ripley/R/packages/tests-devel/yaleBraille.Rcheck/00LOCK-yaleBraille/00new/yaleBraille/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (yaleBraille)