* installing *source* package ‘wk’ ... ** package ‘wk’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (GCC) 13.2.0’ using C++ compiler: ‘g++-13 (GCC) 13.2.0’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/wk/src' gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c bbox-handler.c -o bbox-handler.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c count-handler.c -o count-handler.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c debug-filter.c -o debug-filter.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c flatten-filter.c -o flatten-filter.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c handle-crc.c -o handle-crc.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c handle-rct.c -o handle-rct.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c handle-sfc.c -o handle-sfc.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c handle-wkb.c -o handle-wkb.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c handle-wkt.cpp -o handle-wkt.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c handle-xy.c -o handle-xy.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c identity-filter.c -o identity-filter.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c init.c -o init.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c make-collection-filter.c -o make-collection-filter.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c make-linestring-filter.c -o make-linestring-filter.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c make-polygon-filter.c -o make-polygon-filter.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c meta-handler.c -o meta-handler.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c orient-filter.cpp -o orient-filter.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c problems-handler.c -o problems-handler.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c sfc-writer.c -o sfc-writer.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c trans-affine.c -o trans-affine.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c trans-explicit.c -o trans-explicit.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c trans-set.c -o trans-set.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c transform.c -o transform.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c vctr.c -o vctr.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c vertex-filter.c -o vertex-filter.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c void-handler.c -o void-handler.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c wk-v1.c -o wk-v1.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c wkb-writer.c -o wkb-writer.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c wkt-writer.cpp -o wkt-writer.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c xy-writer.c -o xy-writer.o g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o wk.so bbox-handler.o count-handler.o debug-filter.o flatten-filter.o handle-crc.o handle-rct.o handle-sfc.o handle-wkb.o handle-wkt.o handle-xy.o identity-filter.o init.o make-collection-filter.o make-linestring-filter.o make-polygon-filter.o meta-handler.o orient-filter.o problems-handler.o sfc-writer.o trans-affine.o trans-explicit.o trans-set.o transform.o vctr.o vertex-filter.o void-handler.o wk-v1.o wkb-writer.o wkt-writer.o xy-writer.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/wk/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/wk/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/wk/src' installing to /data/gannet/ripley/R/packages/tests-devel/wk.Rcheck/00LOCK-wk/00new/wk/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (wk)