* installing *source* package ‘transformr’ ...
** package ‘transformr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
using C++11
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/transformr/src'
g++-13 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/cpp11/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -c align_rings.cpp -o align_rings.o
g++-13 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/cpp11/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -c cpp11.cpp -o cpp11.o
g++-13 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/cpp11/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -c fill_down.cpp -o fill_down.o
g++-13 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/cpp11/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -c sf_packing.cpp -o sf_packing.o
sf_packing.cpp: In function 'cpp11::writable::list make_path(cpp11::doubles&, cpp11::doubles&, std::vector<std::vector<int> >&)':
sf_packing.cpp:131:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  131 |   for (i = 0; i < start.size() - 1; ++i) {
      |               ~~^~~~~~~~~~~~~~~~~~
sf_packing.cpp:132:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  132 |     for (j = 0; j < start[i].size(); ++j) {
      |                 ~~^~~~~~~~~~~~~~~~~
sf_packing.cpp:134:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  134 |       int last = j == start[i].size() - 1 ? start[i + 1][0] : start[i][j + 1] - 1;
      |                  ~~^~~~~~~~~~~~~~~~~~~~~~
sf_packing.cpp: In function 'cpp11::writable::list make_polygon(cpp11::doubles&, cpp11::doubles&, std::vector<std::vector<int> >&)':
sf_packing.cpp:153:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  153 |   for (i = 0; i < start.size() - 1; ++i) {
      |               ~~^~~~~~~~~~~~~~~~~~
sf_packing.cpp:155:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  155 |     for (j = 0; j < start[i].size(); ++j) {
      |                 ~~^~~~~~~~~~~~~~~~~
sf_packing.cpp:157:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  157 |       int last = j == start[i].size() - 1 ? start[i + 1][0] : start[i][j + 1] - 1;
      |                  ~~^~~~~~~~~~~~~~~~~~~~~~
g++-13 -std=gnu++11 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o transformr.so align_rings.o cpp11.o fill_down.o sf_packing.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/transformr/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/transformr/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/transformr/src'
installing to /data/gannet/ripley/R/packages/tests-devel/transformr.Rcheck/00LOCK-transformr/00new/transformr/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (transformr)