- using R Under development (unstable) (2023-06-02 r84486)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-13 (GCC) 13.1.0
GNU Fortran (GCC) 13.1.0
- running under: Fedora Linux 36 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘trajectories/DESCRIPTION’ ... OK
- this is package ‘trajectories’ version ‘0.2-7’
- checking package namespace information ... OK
- checking package dependencies ... NOTE
Package suggested but not available for checking: ‘taxidata’
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘trajectories’ can be installed ... [19s/23s] OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [22s/25s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [59s/74s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [12s/14s] OK
Running ‘tracks.R’ [11s/14s]
Comparing ‘tracks.Rout’ to ‘tracks.Rout.save’ ...7,10d6
< The legacy packages maptools, rgdal, and rgeos, underpinning this package
< will retire shortly. Please refer to R-spatial evolution reports on
< https://r-spatial.org/r/2023/05/15/evolution4.html for details.
< This package is now running under evolution status 0
32,46d27
< Please note that rgdal will be retired during October 2023,
< plan transition to sf/stars/terra functions using GDAL and PROJ
< at your earliest convenience.
< See https://r-spatial.org/r/2023/05/15/evolution4.html and https://github.com/r-spatial/evolution
< rgdal: version: 1.6-7, (SVN revision 1203)
< Geospatial Data Abstraction Library extensions to R successfully loaded
< Loaded GDAL runtime: GDAL 3.4.3, released 2022/04/22
< Path to GDAL shared files: /usr/local/share/gdal
< GDAL binary built with GEOS: TRUE
< Loaded PROJ runtime: Rel. 8.2.1, January 1st, 2022, [PJ_VERSION: 821]
< Path to PROJ shared files: /data/gannet/ripley/.local/share/proj:/usr/local/share/proj:/usr/local/share/proj
< PROJ CDN enabled: FALSE
< Linking to sp version:1.6-1
< To mute warnings of possible GDAL/OSR exportToProj4() degradation,
< use options("rgdal_show_exportToProj4_warnings"="none") before loading sp or rgdal.
230,267c211,213
< Linking to GEOS 3.10.2, GDAL 3.4.3, PROJ 8.2.1; sf_use_s2() is TRUE
< [[1]]
< An object of class Track
< 3points
< bbox:
< min max
< x 3 6
< y 5 7
< [[2]]
< An object of class Track
< 2points
< bbox:
< min max
< x 6 7
< y 4 5
< [[3]]
< An object of class Track
< 3points
< bbox:
< min max
< x 1 2
< y 2 4
< [[4]]
< An object of class Track
< 3points
< bbox:
< min max
< x 3 3
< y 1 4
< [[5]]
< An object of class Tracks
< 2 tracks followed by a single object
< [[6]]
< An object of class Tracks
< 2 tracks followed by a single object
< [[7]]
< An object of class TracksCollection
< 2 collection of tracks followed by 2 object
---
> Warning message:
> In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
> there is no package called 'sf'
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking re-building of vignette outputs ... [36s/49s] OK
- checking PDF version of manual ... [11s/17s] OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 NOTE