* installing *source* package ‘tma’ ...
** this is package ‘tma’ version ‘0.3.0’
** package ‘tma’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/tma/src'
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c code.cpp -o code.o
code.cpp: In function ‘Rcpp::List accumulate_network(std::string, SEXP, Rcpp::NumericVector, Rcpp::Function, int, bool)’:
code.cpp:127:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  127 |     for(int j = 0; j < codes_decayed.n_rows; j ++) {
      |                    ~~^~~~~~~~~~~~~~~~~~~~~~
code.cpp: In function ‘Rcpp::List apply_tensor(Rcpp::NumericVector, Rcpp::IntegerVector, std::vector<int, std::allocator<int> >, std::vector<int, std::allocator<int> >, std::vector<int, std::allocator<int> >, Rcpp::NumericMatrix, std::vector<int, std::allocator<int> >, arma::mat, Rcpp::NumericVector, bool)’:
code.cpp:360:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  360 |   for(int i = 0; i < unit_rows.size(); ++i) {
      |                  ~~^~~~~~~~~~~~~~~~~~
code.cpp:377:9: warning: unused variable ‘response_win’ [-Wunused-variable]
  377 |     int response_win = tensor[response_win_idx];
      |         ^~~~~~~~~~~~
code.cpp:352:7: warning: unused variable ‘index’ [-Wunused-variable]
  352 |   int index = 0;
      |       ^~~~~
g++ -std=gnu++17 -shared -L/usr/local/lib64 -o tma.so RcppExports.o code.o -fopenmp -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/tma/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/tma/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/tma/src'
installing to /data/gannet/ripley/R/packages/tests-devel/tma.Rcheck/00LOCK-tma/00new/tma/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (tma)