- using R Under development (unstable) (2024-10-01 r87205)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-14 (GCC) 14.2.0
GNU Fortran (GCC) 14.2.0
- running under: Fedora Linux 36 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘stringdist/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘stringdist’ version ‘0.9.12’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘stringdist’ can be installed ... [9s/13s] OK
See the install log for details.
- used C compiler: ‘gcc-14 (GCC) 14.2.0’
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking whether startup messages can be suppressed ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... ERROR
Running ‘tinytest.R’
Running the tests in ‘tests/tinytest.R’ failed.
Complete output:
> if ( requireNamespace("tinytest", quietly=TRUE) ){
+ tinytest::test_package("stringdist")
+ }
test_afind.R.................. 0 tests
test_afind.R.................. 0 tests
test_afind.R.................. 0 tests
test_afind.R.................. 0 tests
test_afind.R.................. 0 tests
test_afind.R.................. 0 tests
test_afind.R.................. 0 tests
test_afind.R.................. 1 tests [0;32mOK [0m
test_afind.R.................. 2 tests [0;32mOK [0m
test_afind.R.................. 3 tests [0;32mOK [0m
test_afind.R.................. 3 tests [0;32mOK [0m
test_afind.R.................. 4 tests [0;32mOK [0m
test_afind.R.................. 4 tests [0;32mOK [0m
test_afind.R.................. 5 tests [0;32mOK [0m
test_afind.R.................. 6 tests [0;32mOK [0m
test_afind.R.................. 7 tests [0;32mOK [0m
test_afind.R.................. 8 tests [0;32mOK [0m
test_afind.R.................. 9 tests [0;32mOK [0m
test_afind.R.................. 9 tests [0;32mOK [0m
test_afind.R.................. 10 tests [0;32mOK [0m
test_afind.R.................. 10 tests [0;32mOK [0m
test_afind.R.................. 10 tests [0;32mOK [0m
test_afind.R.................. 10 tests [0;32mOK [0m
test_afind.R.................. 10 tests [0;32mOK [0m
test_afind.R.................. 19 tests [0;32mOK [0m
test_afind.R.................. 20 tests [0;32mOK [0m
test_afind.R.................. 21 tests [0;32mOK [0m
test_afind.R.................. 22 tests [0;32mOK [0m
test_afind.R.................. 23 tests [0;32mOK [0m
test_afind.R.................. 24 tests [0;32mOK [0m
test_afind.R.................. 25 tests [0;32mOK [0m
test_afind.R.................. 26 tests [0;32mOK [0m
test_afind.R.................. 27 tests [0;32mOK [0m
test_afind.R.................. 28 tests [0;32mOK [0m
test_afind.R.................. 29 tests [0;32mOK [0m
test_afind.R.................. 30 tests [0;32mOK [0m
test_afind.R.................. 31 tests [0;32mOK [0m
test_afind.R.................. 32 tests [0;32mOK [0m
test_afind.R.................. 33 tests [0;32mOK [0m [0;34m0.1s [0m
test_amatch.R................. 0 tests
test_amatch.R................. 1 tests [0;32mOK [0m
test_amatch.R................. 2 tests [0;32mOK [0m
test_amatch.R................. 3 tests [0;32mOK [0m
test_amatch.R................. 4 tests [0;32mOK [0m
test_amatch.R................. 5 tests [0;32mOK [0m
test_amatch.R................. 6 tests [0;32mOK [0m
test_amatch.R................. 7 tests [0;32mOK [0m
test_amatch.R................. 8 tests [0;32mOK [0m
test_amatch.R................. 9 tests [0;32mOK [0m
test_amatch.R................. 10 tests [0;32mOK [0m
test_amatch.R................. 11 tests [0;32mOK [0m
test_amatch.R................. 12 tests [0;32mOK [0m
test_amatch.R................. 13 tests [0;32mOK [0m
test_amatch.R................. 14 tests [0;32mOK [0m
test_amatch.R................. 15 tests [0;32mOK [0m
test_amatch.R................. 16 tests [0;32mOK [0m
test_amatch.R................. 17 tests [0;32mOK [0m
test_amatch.R................. 18 tests [0;32mOK [0m
test_amatch.R................. 19 tests [0;32mOK [0m
test_amatch.R................. 20 tests [0;32mOK [0m
test_amatch.R................. 21 tests [0;32mOK [0m
test_amatch.R................. 22 tests [0;32mOK [0m
test_amatch.R................. 23 tests [0;32mOK [0m
test_amatch.R................. 24 tests [0;32mOK [0m
test_amatch.R................. 25 tests [0;32mOK [0m
test_amatch.R................. 26 tests [0;32mOK [0m
test_amatch.R................. 27 tests [0;32mOK [0m
test_amatch.R................. 28 tests [0;32mOK [0m
test_amatch.R................. 29 tests [0;32mOK [0m
test_amatch.R................. 30 tests [0;32mOK [0m
test_amatch.R................. 31 tests [0;32mOK [0m
test_amatch.R................. 32 tests [0;32mOK [0m
test_amatch.R................. 33 tests [0;32mOK [0m
test_amatch.R................. 34 tests [0;32mOK [0m
test_amatch.R................. 35 tests [0;32mOK [0m
test_amatch.R................. 36 tests [0;32mOK [0m
test_amatch.R................. 37 tests [0;32mOK [0m
test_amatch.R................. 38 tests [0;32mOK [0m
test_amatch.R................. 39 tests [0;32mOK [0m
test_amatch.R................. 40 tests [0;32mOK [0m
test_amatch.R................. 41 tests [0;32mOK [0m
test_amatch.R................. 42 tests [0;32mOK [0m
test_amatch.R................. 43 tests [0;32mOK [0m
test_amatch.R................. 44 tests [0;32mOK [0m
test_amatch.R................. 45 tests [0;32mOK [0m
test_amatch.R................. 46 tests [0;32mOK [0m
test_amatch.R................. 47 tests [0;32mOK [0m
test_amatch.R................. 48 tests [0;32mOK [0m
test_amatch.R................. 49 tests [0;32mOK [0m
test_amatch.R................. 50 tests [0;32mOK [0m
test_amatch.R................. 51 tests [0;32mOK [0m
test_amatch.R................. 52 tests [0;32mOK [0m
test_amatch.R................. 53 tests [0;32mOK [0m
test_amatch.R................. 54 tests [0;32mOK [0m
test_amatch.R................. 55 tests [0;32mOK [0m
test_amatch.R................. 56 tests [0;32mOK [0m
test_amatch.R................. 57 tests [0;32mOK [0m
test_amatch.R................. 58 tests [0;32mOK [0m
test_amatch.R................. 59 tests [0;32mOK [0m
test_amatch.R................. 60 tests [0;32mOK [0m
test_amatch.R................. 61 tests [0;32mOK [0m
test_amatch.R................. 62 tests [0;32mOK [0m
test_amatch.R................. 63 tests [0;32mOK [0m
test_amatch.R................. 64 tests [0;32mOK [0m
test_amatch.R................. 65 tests [0;32mOK [0m
test_amatch.R................. 66 tests [0;32mOK [0m
test_amatch.R................. 67 tests [0;32mOK [0m
test_amatch.R................. 68 tests [0;32mOK [0m
test_amatch.R................. 69 tests [0;32mOK [0m
test_amatch.R................. 70 tests [0;32mOK [0m
test_amatch.R................. 71 tests [0;32mOK [0m
test_amatch.R................. 72 tests [0;32mOK [0m
test_amatch.R................. 73 tests [0;32mOK [0m
test_amatch.R................. 74 tests [0;32mOK [0m
test_amatch.R................. 75 tests [0;32mOK [0m
test_amatch.R................. 76 tests [0;32mOK [0m
test_amatch.R................. 77 tests [0;32mOK [0m
test_amatch.R................. 78 tests [0;32mOK [0m
test_amatch.R................. 79 tests [0;32mOK [0m
test_amatch.R................. 80 tests [0;32mOK [0m
test_amatch.R................. 81 tests [0;32mOK [0m
test_amatch.R................. 82 tests [0;32mOK [0m
test_amatch.R................. 83 tests [0;32mOK [0m
test_amatch.R................. 84 tests [0;32mOK [0m
test_amatch.R................. 85 tests [0;32mOK [0m
test_amatch.R................. 86 tests [0;32mOK [0m
test_amatch.R................. 87 tests [0;32mOK [0m
test_amatch.R................. 88 tests [0;32mOK [0m
test_amatch.R................. 89 tests [0;32mOK [0m
test_amatch.R................. 90 tests [0;32mOK [0m
test_amatch.R................. 91 tests [0;32mOK [0m
test_amatch.R................. 92 tests [0;32mOK [0m
test_amatch.R................. 93 tests [0;32mOK [0m
test_amatch.R................. 94 tests [0;32mOK [0m
test_amatch.R................. 95 tests [0;32mOK [0m
test_amatch.R................. 96 tests [0;32mOK [0m
test_amatch.R................. 97 tests [0;32mOK [0m
test_amatch.R................. 98 tests [0;32mOK [0m
test_amatch.R................. 98 tests [0;32mOK [0m
test_amatch.R................. 98 tests [0;32mOK [0m
test_amatch.R................. 98 tests [0;32mOK [0m
test_amatch.R................. 99 tests [0;32mOK [0m
test_amatch.R................. 100 tests [0;32mOK [0m
test_amatch.R................. 101 tests [0;32mOK [0m
test_amatch.R................. 102 tests [0;32mOK [0m
test_amatch.R................. 103 tests [0;32mOK [0m
test_amatch.R................. 104 tests [0;32mOK [0m
test_amatch.R................. 105 tests [0;32mOK [0m
test_amatch.R................. 106 tests [0;32mOK [0m
test_amatch.R................. 107 tests [0;32mOK [0m
test_amatch.R................. 108 tests [0;32mOK [0m
test_amatch.R................. 109 tests [0;32mOK [0m
test_amatch.R................. 110 tests [0;32mOK [0m
test_amatch.R................. 111 tests [0;32mOK [0m
test_amatch.R................. 112 tests [0;32mOK [0m
test_amatch.R................. 113 tests [0;32mOK [0m
test_amatch.R................. 114 tests [0;32mOK [0m
test_amatch.R................. 114 tests [0;32mOK [0m
test_amatch.R................. 114 tests [0;32mOK [0m
test_amatch.R................. 115 tests [0;32mOK [0m
test_amatch.R................. 116 tests [0;32mOK [0m
test_amatch.R................. 117 tests [0;32mOK [0m
test_amatch.R................. 118 tests [0;32mOK [0m [0;34m0.1s [0m
test_gh_issue_59.R............ 0 tests [0;36m2ms [0m
test_gh_issue_78.R............ 0 tests
test_gh_issue_78.R............ 1 tests [0;32mOK [0m
test_gh_issue_78.R............ 2 tests [0;32mOK [0m [0;36m4ms [0m
test_gh_issue_88.R............ 0 tests
test_gh_issue_88.R............ 0 tests
test_gh_issue_88.R............ 1 tests [0;32mOK [0m [0;36m6ms [0m
test_phonetic.R............... 0 tests
test_phonetic.R............... 0 tests
test_phonetic.R............... 0 tests
test_phonetic.R............... 1 tests [0;32mOK [0m
test_phonetic.R............... 2 tests [0;32mOK [0m
test_phonetic.R............... 3 tests [0;32mOK [0m
test_phonetic.R............... 3 tests [0;32mOK [0m
test_phonetic.R............... 4 tests [0;32mOK [0m
test_phonetic.R............... 5 tests [0;32mOK [0m
test_phonetic.R............... 5 tests [0;32mOK [0m
test_phonetic.R............... 6 tests [0;32mOK [0m [0;36m22ms [0m
test_qgrams.R................. 0 tests
test_qgrams.R................. 1 tests [0;32mOK [0m
test_qgrams.R................. 2 tests [0;32mOK [0m
test_qgrams.R................. 3 tests [0;32mOK [0m
test_qgrams.R................. 4 tests [0;32mOK [0m
test_qgrams.R................. 5 tests [0;32mOK [0m
test_qgrams.R................. 6 tests [0;32mOK [0m
test_qgrams.R................. 7 tests [0;32mOK [0m
*** caught segfault ***
address 0x1, cause 'memory not mapped'
Traceback:
1: qgrams(c(""), q = 0)
2: data.class(current)
3: all.equal.numeric(target, current, tolerance = tolerance, ...)
4: all.equal(target, current, tolerance = tolerance, ...)
5: expect_equal(current, target, check.attributes = FALSE, use.names = FALSE, tolerance = tolerance, info = info, ...)
6: fun(...)
7: expect_equivalent(qgrams(c(""), q = 0), as.matrix(table("")))
8: eval(expr, envir = e)
9: eval(expr, envir = e)
10: FUN(X[[i]], ...)
11: lapply(basename(testfiles), run_test_file, at_home = at_home, verbose = verbose, color = color, remove_side_effects = remove_side_effects, ...)
12: run_test_dir(testdir, at_home = at_home, cluster = cluster, ...)
13: tinytest::test_package("stringdist")
An irrecoverable exception occurred. R is aborting now ...
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [21s/32s] OK
- checking PDF version of manual ... [8s/14s] OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 ERROR