* installing *source* package ‘stfit’ ...
** package ‘stfit’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/stfit/src'
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c rcpp_cov_est.cpp -o rcpp_cov_est.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c rcpp_cov_est1d.cpp -o rcpp_cov_est1d.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c rcpp_mean_est.cpp -o rcpp_mean_est.o
rcpp_cov_est.cpp: In function 'Rcpp::DataFrame sparse_emp_cov_est(Rcpp::NumericMatrix, int, int, int)':
rcpp_cov_est.cpp:252:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  252 |     for(jj = 0; jj < ii_nbr.size(); jj++){
      |                 ~~~^~~~~~~~~~~~~~~
rcpp_cov_est.cpp: In function 'Rcpp::DataFrame sparse_emp_cov_est1(Rcpp::NumericMatrix, int, int, int, Rcpp::NumericVector)':
rcpp_cov_est.cpp:278:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  278 |     for(jj = 0; jj < ii_nbr.size(); jj++){
      |                 ~~~^~~~~~~~~~~~~~~
rcpp_cov_est.cpp: In function 'Rcpp::DataFrame sparse_lc_cov_est(Rcpp::NumericMatrix, Rcpp::NumericMatrix, int, int, int)':
rcpp_cov_est.cpp:304:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  304 |     for(jj = 0; jj < ii_nbr.size(); jj++){
      |                 ~~~^~~~~~~~~~~~~~~
rcpp_cov_est.cpp: In function 'Rcpp::DataFrame sparse_lc_cov_est1(Rcpp::NumericMatrix, Rcpp::NumericMatrix, int, int, int, Rcpp::NumericVector)':
rcpp_cov_est.cpp:330:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  330 |       for(jj = 0; jj < ii_nbr.size(); jj++){
      |                   ~~~^~~~~~~~~~~~~~~
g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o stfit.so RcppExports.o rcpp_cov_est.o rcpp_cov_est1d.o rcpp_mean_est.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/stfit/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/stfit/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/stfit/src'
installing to /data/gannet/ripley/R/packages/tests-devel/stfit.Rcheck/00LOCK-stfit/00new/stfit/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (stfit)