* installing *source* package ‘stelfi’ ... ** this is package ‘stelfi’ version ‘1.0.2’ ** package ‘stelfi’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++ (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/stelfi/src' g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DTMBAD_FRAMEWORK -I'/data/gannet/ripley/R/test-dev/TMB/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c stelfi.cpp -o stelfi.o In file included from stelfi.cpp:14: spatial_hawkes.h: In instantiation of ‘Type spatial_hawkes(objective_function<Type>*) [with Type = TMBad::global::ad_aug]’: stelfi.cpp:44:26: required from ‘Type objective_function<Type>::operator()() [with Type = TMBad::global::ad_aug]’ 44 | return spatial_hawkes(this); | ~~~~~~~~~~~~~~^~~~~~ /data/gannet/ripley/R/test-dev/TMB/include/tmb_core.hpp:1281:6: required from here 1281 | F(); // Run through user template (modifies reportvector) | ~^~ spatial_hawkes.h:291:16: warning: variable ‘before’ set but not used [-Wunused-but-set-variable] 291 | Type before = gammac; | ^~~~~~ spatial_hawkes.h:321:22: warning: variable ‘before’ set but not used [-Wunused-but-set-variable] 321 | Type before = gammac; | ^~~~~~ spatial_hawkes.h:276:12: warning: variable ‘gamma_ratio’ set but not used [-Wunused-but-set-variable] 276 | Type gamma_ratio = (sum(lambdaXsasep) + D) / gammac; | ^~~~~~~~~~~ spatial_hawkes.h: In instantiation of ‘Type spatial_hawkes(objective_function<Type>*) [with Type = double]’: stelfi.cpp:44:26: required from ‘Type objective_function<Type>::operator()() [with Type = double]’ 44 | return spatial_hawkes(this); | ~~~~~~~~~~~~~~^~~~~~ /data/gannet/ripley/R/test-dev/TMB/include/tmb_core.hpp:2035:7: required from here 2035 | PROTECT( res = asSEXP( pf->operator()() ) ); | ~~~~~~~~~~~~~~^~ spatial_hawkes.h:291:16: warning: unused variable ‘before’ [-Wunused-variable] 291 | Type before = gammac; | ^~~~~~ spatial_hawkes.h:321:22: warning: unused variable ‘before’ [-Wunused-variable] 321 | Type before = gammac; | ^~~~~~ spatial_hawkes.h:276:12: warning: unused variable ‘gamma_ratio’ [-Wunused-variable] 276 | Type gamma_ratio = (sum(lambdaXsasep) + D) / gammac; | ^~~~~~~~~~~ g++ -std=gnu++17 -shared -L/usr/local/lib64 -o stelfi.so stelfi.o -fopenmp make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/stelfi/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/stelfi/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/stelfi/src' installing to /data/gannet/ripley/R/packages/tests-devel/stelfi.Rcheck/00LOCK-stelfi/00new/stelfi/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stelfi)