* installing *source* package ‘spduration’ ...
** package ‘spduration’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (GCC) 13.2.0’
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/spduration/src'
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c init.c -o init.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c loglog_lnl.cpp -o loglog_lnl.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c sploglog_lnl.cpp -o sploglog_lnl.o
loglog_lnl.cpp: In function 'double loglog_lnl(arma::vec, arma::mat, arma::mat)':
loglog_lnl.cpp:33:17: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
33 | for(int i=0; i<cens.size(); ++i) {
| ~^~~~~~~~~~~~
loglog_lnl.cpp:42:17: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
42 | for(int i=0; i<nocens.size(); ++i) {
| ~^~~~~~~~~~~~~~
sploglog_lnl.cpp: In function 'double sploglog_lnl(arma::vec, arma::mat, arma::mat, arma::mat)':
sploglog_lnl.cpp:39:17: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
39 | for(int i=0; i<cens.size(); ++i) {
| ~^~~~~~~~~~~~
sploglog_lnl.cpp:48:17: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
48 | for(int i=0; i<nocens.size(); ++i) {
| ~^~~~~~~~~~~~~~
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c spweib_lnl.cpp -o spweib_lnl.o
spweib_lnl.cpp: In function 'double spweib_lnl(arma::vec, arma::mat, arma::mat, arma::mat)':
spweib_lnl.cpp:39:17: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
39 | for(int i=0; i<cens.size(); ++i) {
| ~^~~~~~~~~~~~
spweib_lnl.cpp:48:17: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
48 | for(int i=0; i<nocens.size(); ++i) {
| ~^~~~~~~~~~~~~~
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c weib_lnl.cpp -o weib_lnl.o
weib_lnl.cpp: In function 'double weib_lnl(arma::vec, arma::mat, arma::mat)':
weib_lnl.cpp:33:17: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
33 | for(int i=0; i<cens.size(); ++i) {
| ~^~~~~~~~~~~~
weib_lnl.cpp:42:17: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
42 | for(int i=0; i<nocens.size(); ++i) {
| ~^~~~~~~~~~~~~~
g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o spduration.so RcppExports.o init.o loglog_lnl.o sploglog_lnl.o spweib_lnl.o weib_lnl.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/spduration/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/spduration/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/spduration/src'
installing to /data/gannet/ripley/R/packages/tests-devel/spduration.Rcheck/00LOCK-spduration/00new/spduration/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (spduration)