* installing *source* package ‘sparseLM’ ... ** this is package ‘sparseLM’ version ‘0.5’ ** package ‘sparseLM’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/sparseLM/src' gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DBUILDING_R_SPARSELM -I'/data/gannet/ripley/R/R-devel/library/Matrix/include' -I/usr/local/include -DHAVE_CHOLMOD -DUSE_ATA_QUADS -DCHOLMOD_R_MATRIX -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c Matrix_interface.c -o Matrix_interface.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DBUILDING_R_SPARSELM -I'/data/gannet/ripley/R/R-devel/library/Matrix/include' -I/usr/local/include -DHAVE_CHOLMOD -DUSE_ATA_QUADS -DCHOLMOD_R_MATRIX -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c add_assign_col_inplace.c -o add_assign_col_inplace.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DBUILDING_R_SPARSELM -I'/data/gannet/ripley/R/R-devel/library/Matrix/include' -I/usr/local/include -DHAVE_CHOLMOD -DUSE_ATA_QUADS -DCHOLMOD_R_MATRIX -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c init.c -o init.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DBUILDING_R_SPARSELM -I'/data/gannet/ripley/R/R-devel/library/Matrix/include' -I/usr/local/include -DHAVE_CHOLMOD -DUSE_ATA_QUADS -DCHOLMOD_R_MATRIX -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c sparselm.c -o sparselm.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DBUILDING_R_SPARSELM -I'/data/gannet/ripley/R/R-devel/library/Matrix/include' -I/usr/local/include -DHAVE_CHOLMOD -DUSE_ATA_QUADS -DCHOLMOD_R_MATRIX -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c splm.c -o splm.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DBUILDING_R_SPARSELM -I'/data/gannet/ripley/R/R-devel/library/Matrix/include' -I/usr/local/include -DHAVE_CHOLMOD -DUSE_ATA_QUADS -DCHOLMOD_R_MATRIX -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c splm_ccsm.c -o splm_ccsm.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DBUILDING_R_SPARSELM -I'/data/gannet/ripley/R/R-devel/library/Matrix/include' -I/usr/local/include -DHAVE_CHOLMOD -DUSE_ATA_QUADS -DCHOLMOD_R_MATRIX -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c splm_cholmod.c -o splm_cholmod.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DBUILDING_R_SPARSELM -I'/data/gannet/ripley/R/R-devel/library/Matrix/include' -I/usr/local/include -DHAVE_CHOLMOD -DUSE_ATA_QUADS -DCHOLMOD_R_MATRIX -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c splm_crsm.c -o splm_crsm.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DBUILDING_R_SPARSELM -I'/data/gannet/ripley/R/R-devel/library/Matrix/include' -I/usr/local/include -DHAVE_CHOLMOD -DUSE_ATA_QUADS -DCHOLMOD_R_MATRIX -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c splm_hessian.c -o splm_hessian.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DBUILDING_R_SPARSELM -I'/data/gannet/ripley/R/R-devel/library/Matrix/include' -I/usr/local/include -DHAVE_CHOLMOD -DUSE_ATA_QUADS -DCHOLMOD_R_MATRIX -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c splm_misc.c -o splm_misc.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DBUILDING_R_SPARSELM -I'/data/gannet/ripley/R/R-devel/library/Matrix/include' -I/usr/local/include -DHAVE_CHOLMOD -DUSE_ATA_QUADS -DCHOLMOD_R_MATRIX -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c splm_stm.c -o splm_stm.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DBUILDING_R_SPARSELM -I'/data/gannet/ripley/R/R-devel/library/Matrix/include' -I/usr/local/include -DHAVE_CHOLMOD -DUSE_ATA_QUADS -DCHOLMOD_R_MATRIX -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c splm_time.c -o splm_time.o gcc -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/lib64 -o sparseLM.so Matrix_interface.o add_assign_col_inplace.o init.o sparselm.o splm.o splm_ccsm.o splm_cholmod.o splm_crsm.o splm_hessian.o splm_misc.o splm_stm.o splm_time.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/sparseLM/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/sparseLM/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/sparseLM/src' installing to /data/gannet/ripley/R/packages/tests-devel/sparseLM.Rcheck/00LOCK-sparseLM/00new/sparseLM/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sparseLM)