Install log for 'skymodelr'

* installing *source* package ‘skymodelr’ ...
** this is package ‘skymodelr’ version ‘0.3.2’
** package ‘skymodelr’ successfully unpacked and MD5 sums checked
** using staged installation
** preparing to configure package 'skymodelr' ...
*** configured file: 'src/Makevars.in' => 'src/Makevars'
** finished configure for package 'skymodelr'
** libs
using C++ compiler: ‘g++ (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/skymodelr/src'
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/data/gannet/ripley/R/test-dev/libopenexr/include/OpenEXR -I/data/gannet/ripley/R/test-dev/libimath/include/Imath -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/math -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/hosek -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/ArHosekSkyModel -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/PragueSkyModel -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/libimath/include' -I'/data/gannet/ripley/R/test-dev/libopenexr/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c makesky.cpp -o makesky.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/data/gannet/ripley/R/test-dev/libopenexr/include/OpenEXR -I/data/gannet/ripley/R/test-dev/libimath/include/Imath -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/math -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/hosek -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/ArHosekSkyModel -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/PragueSkyModel -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/libimath/include' -I'/data/gannet/ripley/R/test-dev/libopenexr/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c radiometry.cpp -o radiometry.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/data/gannet/ripley/R/test-dev/libopenexr/include/OpenEXR -I/data/gannet/ripley/R/test-dev/libimath/include/Imath -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/math -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/hosek -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/ArHosekSkyModel -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/PragueSkyModel -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/libimath/include' -I'/data/gannet/ripley/R/test-dev/libopenexr/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c stars.cpp -o stars.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/data/gannet/ripley/R/test-dev/libopenexr/include/OpenEXR -I/data/gannet/ripley/R/test-dev/libimath/include/Imath -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/math -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/hosek -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/ArHosekSkyModel -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/PragueSkyModel -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/libimath/include' -I'/data/gannet/ripley/R/test-dev/libopenexr/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/data/gannet/ripley/R/test-dev/libopenexr/include/OpenEXR -I/data/gannet/ripley/R/test-dev/libimath/include/Imath -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/math -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/hosek -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/ArHosekSkyModel -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/PragueSkyModel -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/libimath/include' -I'/data/gannet/ripley/R/test-dev/libopenexr/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c ArHosekSkyModel/ArHosekSkyModel.cpp -o ArHosekSkyModel/ArHosekSkyModel.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/data/gannet/ripley/R/test-dev/libopenexr/include/OpenEXR -I/data/gannet/ripley/R/test-dev/libimath/include/Imath -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/math -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/hosek -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/ArHosekSkyModel -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/PragueSkyModel -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/libimath/include' -I'/data/gannet/ripley/R/test-dev/libopenexr/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c hosek/hosek.cpp -o hosek/hosek.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/data/gannet/ripley/R/test-dev/libopenexr/include/OpenEXR -I/data/gannet/ripley/R/test-dev/libimath/include/Imath -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/math -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/hosek -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/ArHosekSkyModel -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/PragueSkyModel -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/libimath/include' -I'/data/gannet/ripley/R/test-dev/libopenexr/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c hosek/cie.cpp -o hosek/cie.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/data/gannet/ripley/R/test-dev/libopenexr/include/OpenEXR -I/data/gannet/ripley/R/test-dev/libimath/include/Imath -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/math -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/hosek -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/ArHosekSkyModel -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/PragueSkyModel -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/libimath/include' -I'/data/gannet/ripley/R/test-dev/libopenexr/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c hosek/atmosphere.cpp -o hosek/atmosphere.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/data/gannet/ripley/R/test-dev/libopenexr/include/OpenEXR -I/data/gannet/ripley/R/test-dev/libimath/include/Imath -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/math -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/hosek -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/ArHosekSkyModel -I/data/gannet/ripley/R/packages/tests-devel/skymodelr/src/PragueSkyModel -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/libimath/include' -I'/data/gannet/ripley/R/test-dev/libopenexr/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c PragueSkyModel/PragueSkyModel.cpp -o PragueSkyModel/PragueSkyModel.o
PragueSkyModel/PragueSkyModel.cpp: In member function ‘void PragueSkyModel::readRadiance(FILE*, double)’:
PragueSkyModel/PragueSkyModel.cpp:348:18: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  348 |     if (valsRead != visibilityCount)
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~
PragueSkyModel/PragueSkyModel.cpp:387:18: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  387 |     if (valsRead != albedoCount)
      |         ~~~~~~~~~^~~~~~~~~~~~~~
PragueSkyModel/PragueSkyModel.cpp:397:18: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  397 |     if (valsRead != altitudeCount)
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~
PragueSkyModel/PragueSkyModel.cpp:407:18: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  407 |     if (valsRead != elevationCount)
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~
PragueSkyModel/PragueSkyModel.cpp:442:18: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  442 |     if (valsRead != sunBreaksCount)
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~
PragueSkyModel/PragueSkyModel.cpp:452:18: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  452 |     if (valsRead != zenitBreaksCount)
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~
PragueSkyModel/PragueSkyModel.cpp:462:18: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  462 |     if (valsRead != emphBreaksCount)
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~
PragueSkyModel/PragueSkyModel.cpp:512:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  512 |             for (int i = 0; i < metadataRad.sunBreaks.size(); ++i) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
PragueSkyModel/PragueSkyModel.cpp:528:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  528 |             for (int i = 0; i < metadataRad.zenithBreaks.size(); ++i) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
PragueSkyModel/PragueSkyModel.cpp:539:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  539 |         for (int i = 0; i < metadataRad.emphBreaks.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
PragueSkyModel/PragueSkyModel.cpp: In member function ‘void PragueSkyModel::readTransmittance(FILE*)’:
PragueSkyModel/PragueSkyModel.cpp:580:18: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  580 |     if (valsRead != altitudesCount)
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~
PragueSkyModel/PragueSkyModel.cpp:588:18: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  588 |     if (valsRead != visibilitiesCount)
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
PragueSkyModel/PragueSkyModel.cpp: In member function ‘void PragueSkyModel::readPolarisation(FILE*)’:
PragueSkyModel/PragueSkyModel.cpp:634:18: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  634 |     if (valsRead != sunBreaksCount)
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~
PragueSkyModel/PragueSkyModel.cpp:644:18: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  644 |     if (valsRead != zenithBreaksCount)
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++20 -shared -L/usr/local/lib64 -o skymodelr.so makesky.o radiometry.o stars.o RcppExports.o ArHosekSkyModel/ArHosekSkyModel.o hosek/hosek.o hosek/cie.o hosek/atmosphere.o PragueSkyModel/PragueSkyModel.o -L/data/gannet/ripley/R/test-dev/libopenexr/lib/x86_64 -lOpenEXRUtil-4_0 -lOpenEXR-4_0 -lOpenEXRCore-4_0 -lopenjph -lIlmThread-4_0 -lIex-4_0 -L/data/gannet/ripley/R/test-dev/libimath/lib/x86_64 -lImath-3_2
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/skymodelr/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/skymodelr/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/skymodelr/src'
installing to /data/gannet/ripley/R/packages/tests-devel/skymodelr.Rcheck/00LOCK-skymodelr/00new/skymodelr/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (skymodelr)