Install log for 'selectiveInference'

* installing *source* package ‘selectiveInference’ ...
** package ‘selectiveInference’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (GCC) 13.2.0’
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/selectiveInference/src'
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -DCOLUMN_MAJOR_ORDER -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c Rcpp-debias.cpp -o Rcpp-debias.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -DCOLUMN_MAJOR_ORDER -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c Rcpp-matrixcomps.cpp -o Rcpp-matrixcomps.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -DCOLUMN_MAJOR_ORDER -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c Rcpp-randomized.cpp -o Rcpp-randomized.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -DCOLUMN_MAJOR_ORDER -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -DCOLUMN_MAJOR_ORDER -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include   -I. -DCOLUMN_MAJOR_ORDER -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c matrixcomps.c -o matrixcomps.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -DCOLUMN_MAJOR_ORDER -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include   -I. -DCOLUMN_MAJOR_ORDER -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c quadratic_program.c -o quadratic_program.o
quadratic_program.c: In function 'solve_qp':
quadratic_program.c:424:29: warning: 'old_value' may be used uninitialized [-Wmaybe-uninitialized]
  424 |         if ((fabs(old_value - new_value) < objective_tol * fabs(new_value)) && (iter > 0)) {
      |                   ~~~~~~~~~~^~~~~~~~~~~
quadratic_program.c:292:10: note: 'old_value' was declared here
  292 |   double old_value, new_value;
      |          ^~~~~~~~~
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -DCOLUMN_MAJOR_ORDER -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include   -I. -DCOLUMN_MAJOR_ORDER -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c quadratic_program_wide.c -o quadratic_program_wide.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -DCOLUMN_MAJOR_ORDER -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include   -I. -DCOLUMN_MAJOR_ORDER -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c randomized_lasso.c -o randomized_lasso.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -DCOLUMN_MAJOR_ORDER -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include   -I. -DCOLUMN_MAJOR_ORDER -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c selective_mle.c -o selective_mle.o
/data/gannet/ripley/R/R-devel/bin/Rscript -e "library(Rcpp); Rcpp::compileAttributes('..')"
g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o selectiveInference.so Rcpp-debias.o Rcpp-matrixcomps.o Rcpp-randomized.o RcppExports.o matrixcomps.o quadratic_program.o quadratic_program_wide.o randomized_lasso.o selective_mle.o -L.
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/selectiveInference/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/selectiveInference/src'
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -DCOLUMN_MAJOR_ORDER -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/selectiveInference/src'
installing to /data/gannet/ripley/R/packages/tests-devel/selectiveInference.Rcheck/00LOCK-selectiveInference/00new/selectiveInference/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (selectiveInference)