- using R Under development (unstable) (2025-09-11 r88810)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
GNU Fortran (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
- running under: Fedora Linux 42 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘seedreg/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘seedreg’ version ‘1.0.3’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘seedreg’ can be installed ... [24s/30s] OK
See the install log for details.
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [36s/46s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ... [28s/40s] ERROR
Running examples in ‘seedreg-Ex.R’ failed
The error most likely occurred in:
> ### Name: multicurve
> ### Title: Graph: Merge multiple curves into a single graph
> ### Aliases: multicurve
>
> ### ** Examples
>
> library(seedreg)
> data("aristolochia")
> attach(aristolochia)
> a=LM_model(trat,germ)
$Coefficients
Estimate Std Error t value P-value
(Intercept) -52.50 8.0436071 -6.526922 6.166973e-09 **
trat 3.54 0.3095986 11.434161 2.398736e-18 **
$test
Parameter values
1 Optimum temperature 35.0000000
2 Optimum temperature response 71.4000000
3 Minimal temperature 15.0000000
4 Minimal temperature response 0.6000000
5 Predicted maximum basal value NA
6 Predicted minimum basal value NA
7 AIC 706.9321172
8 BIC 714.0781971
9 r-squared 0.7443336
10 RMSE 19.3344253
[[3]]
> b=LL_model(trat,germ,npar = "LL.3")
$Coefficients
Estimate Std Error t value P-value
b:(Intercept) -19.40819 7.2234673 -2.686825 8.834104e-03 **
d:(Intercept) 63.94663 2.6591940 24.047373 7.589711e-38 **
e:(Intercept) 23.57567 0.7028374 33.543565 5.265615e-48 **
$values
Parameter values
1 Optimum temperature 35.0000000
2 Optimum temperature response 63.9167699
3 Minimal temperature 15.0000000
4 Minimal temperature response 0.0098744
5 Predicted maximum basal value NA
6 Predicted minimum basal value 18.3683368
7 AIC 661.2956178
8 BIC 670.8237244
9 r-squared 0.7900000
10 RMSE 14.3558723
[[3]]
> c=BC_model(trat,germ, npar = "BC.4")
$Coefficients
Estimate Std Error t value P-value
b:(Intercept) -13.957213 3.6556392 -3.817995 2.726669e-04 **
d:(Intercept) 250.774747 60.3259646 4.156995 8.380546e-05 **
e:(Intercept) 25.505952 0.6951316 36.692263 2.126565e-50 **
f:(Intercept) -5.617971 1.7401792 -3.228387 1.838928e-03 **
$values
Parameter values
1 Optimum temperature 29.1414141
2 Optimum temperature response 75.3297253
3 Minimal temperature 15.0000000
4 Minimal temperature response 0.1007687
5 Predicted maximum basal value NA
6 Predicted minimum basal value 16.9061906
7 AIC 642.3420163
8 BIC 654.2521495
9 r-squared 0.8400000
10 RMSE 12.5937300
[[3]]
> d=CD_model(trat,germ, npar = "CRS.4")
$Coefficients
Estimate Std Error t value P-value
b:(Intercept) -14.42145 3.5312045 -4.084003 1.085486e-04 **
d:(Intercept) 6110.38908 1944.3164278 3.142693 2.387074e-03 **
e:(Intercept) 25.81624 0.7578171 34.066589 4.361048e-48 **
f:(Intercept) -6231.70537 2001.2831503 -3.113855 2.603523e-03 **
$values
Parameter values
1 optimum temperature 28.9633963
2 Optimum temperature response 75.7505378
3 Minimal temperature 15.0000000
4 Minimal temperature response 0.1115036
5 Predicted maximum basal value NA
6 Predicted minimum basal value 16.8361836
7 AIC 642.3427825
8 BIC 654.2529157
9 r-squared 0.8400000
10 RMSE 12.5937903
[[3]]
> multicurve(list(a,b,c,d))
Error in equation[[i]] <- plots[[i]][[3]]$plot$s :
replacement has length zero
Calls: multicurve
Execution halted
- checking PDF version of manual ... [8s/11s] OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 ERROR