Install log for 'sdcMicro'

* installing *source* package ‘sdcMicro’ ...
** package ‘sdcMicro’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (GCC) 13.2.0’
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/sdcMicro/src'
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c 0Main.cpp -o 0Main.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c LocalRecProg_cpp.cpp -o LocalRecProg_cpp.o
In file included from 0Main.cpp:35:
Framework.h:892:7: warning: 'char* ParseLine(char*, char*, int, BOOL)' defined but not used [-Wunused-function]
  892 | char *ParseLine(char *Ptr, char *Str, int Size, BOOL AdvanceTo1stChar)
      |       ^~~~~~~~~
Framework.h:838:7: warning: 'char* ParseString(char*, char*, int, BOOL)' defined but not used [-Wunused-function]
  838 | char *ParseString(char *Ptr, char *Str, int Size, BOOL AdvanceTo1stChar)
      |       ^~~~~~~~~~~
Framework.h:804:7: warning: 'char* GoToNextLine(char*)' defined but not used [-Wunused-function]
  804 | char *GoToNextLine(char *Ptr)
      |       ^~~~~~~~~~~~
Framework.h:753:7: warning: 'char* RemoveComment(char*, int)' defined but not used [-Wunused-function]
  753 | char *RemoveComment(char *Ptr, int Size)
      |       ^~~~~~~~~~~~~
Framework.h:731:7: warning: 'char* Stristr(char*, char*, BOOL, BOOL)' defined but not used [-Wunused-function]
  731 | char *Stristr(char *Ptr, char *SubString, BOOL LeaveAfter, BOOL ReturnNULL)
      |       ^~~~~~~
Framework.h:716:7: warning: 'char* ReplaceChar(char*, char, char)' defined but not used [-Wunused-function]
  716 | char *ReplaceChar(char *Str, char OldChar, char NewChar)
      |       ^~~~~~~~~~~
Framework.h:706:7: warning: 'char* Strncpy(char*, const char*, int, BOOL)' defined but not used [-Wunused-function]
  706 | char *Strncpy(char *Dst, const char *Src, int Max, BOOL Warn)
      |       ^~~~~~~
In file included from Mdav.h:24,
                 from LocalRecProg_cpp.cpp:17:
Framework.h:987:6: warning: 'uint TimeGetMilliSecond()' defined but not used [-Wunused-function]
  987 | uint TimeGetMilliSecond(void)
      |      ^~~~~~~~~~~~~~~~~~
Framework.h:892:7: warning: 'char* ParseLine(char*, char*, int, BOOL)' defined but not used [-Wunused-function]
  892 | char *ParseLine(char *Ptr, char *Str, int Size, BOOL AdvanceTo1stChar)
      |       ^~~~~~~~~
Framework.h:838:7: warning: 'char* ParseString(char*, char*, int, BOOL)' defined but not used [-Wunused-function]
  838 | char *ParseString(char *Ptr, char *Str, int Size, BOOL AdvanceTo1stChar)
      |       ^~~~~~~~~~~
Framework.h:804:7: warning: 'char* GoToNextLine(char*)' defined but not used [-Wunused-function]
  804 | char *GoToNextLine(char *Ptr)
      |       ^~~~~~~~~~~~
Framework.h:753:7: warning: 'char* RemoveComment(char*, int)' defined but not used [-Wunused-function]
  753 | char *RemoveComment(char *Ptr, int Size)
      |       ^~~~~~~~~~~~~
Framework.h:731:7: warning: 'char* Stristr(char*, char*, BOOL, BOOL)' defined but not used [-Wunused-function]
  731 | char *Stristr(char *Ptr, char *SubString, BOOL LeaveAfter, BOOL ReturnNULL)
      |       ^~~~~~~
Framework.h:716:7: warning: 'char* ReplaceChar(char*, char, char)' defined but not used [-Wunused-function]
  716 | char *ReplaceChar(char *Str, char OldChar, char NewChar)
      |       ^~~~~~~~~~~
Framework.h:706:7: warning: 'char* Strncpy(char*, const char*, int, BOOL)' defined but not used [-Wunused-function]
  706 | char *Strncpy(char *Dst, const char *Src, int Max, BOOL Warn)
      |       ^~~~~~~
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c Mdav.cpp -o Mdav.o
In file included from Mdav.cpp:25:
Framework.h:987:6: warning: 'uint TimeGetMilliSecond()' defined but not used [-Wunused-function]
  987 | uint TimeGetMilliSecond(void)
      |      ^~~~~~~~~~~~~~~~~~
Framework.h:892:7: warning: 'char* ParseLine(char*, char*, int, BOOL)' defined but not used [-Wunused-function]
  892 | char *ParseLine(char *Ptr, char *Str, int Size, BOOL AdvanceTo1stChar)
      |       ^~~~~~~~~
Framework.h:838:7: warning: 'char* ParseString(char*, char*, int, BOOL)' defined but not used [-Wunused-function]
  838 | char *ParseString(char *Ptr, char *Str, int Size, BOOL AdvanceTo1stChar)
      |       ^~~~~~~~~~~
Framework.h:804:7: warning: 'char* GoToNextLine(char*)' defined but not used [-Wunused-function]
  804 | char *GoToNextLine(char *Ptr)
      |       ^~~~~~~~~~~~
Framework.h:753:7: warning: 'char* RemoveComment(char*, int)' defined but not used [-Wunused-function]
  753 | char *RemoveComment(char *Ptr, int Size)
      |       ^~~~~~~~~~~~~
Framework.h:731:7: warning: 'char* Stristr(char*, char*, BOOL, BOOL)' defined but not used [-Wunused-function]
  731 | char *Stristr(char *Ptr, char *SubString, BOOL LeaveAfter, BOOL ReturnNULL)
      |       ^~~~~~~
Framework.h:716:7: warning: 'char* ReplaceChar(char*, char, char)' defined but not used [-Wunused-function]
  716 | char *ReplaceChar(char *Str, char OldChar, char NewChar)
      |       ^~~~~~~~~~~
Framework.h:706:7: warning: 'char* Strncpy(char*, const char*, int, BOOL)' defined but not used [-Wunused-function]
  706 | char *Strncpy(char *Dst, const char *Src, int Max, BOOL Warn)
      |       ^~~~~~~
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c calcSuppInds.cpp -o calcSuppInds.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c microAggregation.cpp -o microAggregation.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c muargus_microaggregation.cpp -o muargus_microaggregation.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c muargus_rankswap.cpp -o muargus_rankswap.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c rankSwap.cpp -o rankSwap.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c recordSwap_R.cpp -o recordSwap_R.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c sdcMicro.c -o sdcMicro.o
g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o sdcMicro.so 0Main.o LocalRecProg_cpp.o Mdav.o RcppExports.o calcSuppInds.o microAggregation.o muargus_microaggregation.o muargus_rankswap.o rankSwap.o recordSwap_R.o sdcMicro.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/sdcMicro/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/sdcMicro/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/sdcMicro/src'
installing to /data/gannet/ripley/R/packages/tests-devel/sdcMicro.Rcheck/00LOCK-sdcMicro/00new/sdcMicro/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (sdcMicro)