* installing *source* package ‘roxigraph’ ...
** this is package ‘roxigraph’ version ‘0.1.1’
** package ‘roxigraph’ successfully unpacked and MD5 sums checked
** using staged installation
Using cargo 1.93.1 (083ac5135 2025-12-15) (Fedora 1.93.1-1.fc42)
Using rustc 1.93.1 (01f6ddf75 2026-02-11) (Fedora 1.93.1-1.fc42)
Building for CRAN.
Writing `src/Makevars`.
`tools/config.R` has finished.
** libs
using C compiler: ‘gcc (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/roxigraph/src'
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c entrypoint.c -o entrypoint.o
if [ -f ./rust/vendor.tar.xz ]; then \
	tar xf rust/vendor.tar.xz && \
	mkdir -p /data/gannet/ripley/R/packages/tests-devel/roxigraph/src/.cargo && \
	cp rust/vendor-config.toml /data/gannet/ripley/R/packages/tests-devel/roxigraph/src/.cargo/config.toml; \
fi
export CARGO_HOME=/data/gannet/ripley/R/packages/tests-devel/roxigraph/src/.cargo && \
export PATH="/data/gannet/ripley/bin:/data/gannet/ripley/bin2:/usr/local/bin:/usr/local/texbin:/usr/sbin:.:/data/gannet/ripley/bin:/usr/local/texbin:/usr/local/bin:/usr/sbin:/usr/lib64/qt-3.3/bin:/usr/share/Modules/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/usr/lib64/openmpi/bin:/usr/lib64/openmpi/bin:/data/gannet/ripley/.cargo/bin" && \
if [ -z "" ]; then export MACOSX_DEPLOYMENT_TARGET=11.0; else export MACOSX_DEPLOYMENT_TARGET=""; fi && \
RUSTFLAGS=" --print=native-static-libs" cargo build -j 2 --offline --lib --release --manifest-path=./rust/Cargo.toml --target-dir ./rust/target 
warning: a `-j` argument was passed to Cargo but Cargo is also configured with an external jobserver in its environment, ignoring the `-j` parameter
   Compiling libc v0.2.180
   Compiling proc-macro2 v1.0.106
   Compiling unicode-ident v1.0.22
   Compiling quote v1.0.44
   Compiling cfg-if v1.0.4
   Compiling syn v2.0.114
   Compiling zerocopy v0.8.39
   Compiling getrandom v0.3.4
   Compiling thiserror v2.0.18
   Compiling rand_core v0.9.5
   Compiling typenum v1.19.0
   Compiling version_check v0.9.5
   Compiling oxilangtag v0.1.5
   Compiling generic-array v0.14.7
   Compiling memchr v2.7.6
   Compiling oxiri v0.2.11
   Compiling glob v0.3.3
   Compiling clang-sys v1.8.1
   Compiling prettyplease v0.2.37
   Compiling minimal-lexical v0.2.1
   Compiling regex-syntax v0.8.9
   Compiling libloading v0.8.9
   Compiling nom v7.1.3
   Compiling regex-automata v0.4.14
   Compiling ppv-lite86 v0.2.21
   Compiling rand_chacha v0.9.0
   Compiling thiserror-impl v2.0.18
   Compiling block-buffer v0.10.4
   Compiling rand v0.9.2
   Compiling crypto-common v0.1.7
   Compiling either v1.15.0
   Compiling bindgen v0.72.1
   Compiling shlex v1.3.0
   Compiling peg-runtime v0.8.5
   Compiling itertools v0.13.0
   Compiling regex v1.12.3
   Compiling peg-macros v0.8.5
   Compiling digest v0.10.7
   Compiling cexpr v0.6.0
   Compiling jobserver v0.1.34
   Compiling oxsdatatypes v0.2.2
   Compiling quick-xml v0.37.5
   Compiling find-msvc-tools v0.1.9
   Compiling rustc-hash v2.1.1
   Compiling oxrdf v0.3.1
   Compiling json-event-parser v0.2.2
   Compiling bitflags v2.10.0
   Compiling log v0.4.29
   Compiling peg v0.8.5
   Compiling cc v1.2.55
   Compiling aho-corasick v1.1.4
   Compiling cpufeatures v0.2.17
   Compiling parking_lot_core v0.9.12
   Compiling crossbeam-utils v0.8.21
   Compiling extendr-ffi v0.8.1
   Compiling spargebra v0.4.2
   Compiling smallvec v1.15.1
   Compiling once_cell v1.21.3
   Compiling paste v1.0.15
   Compiling scopeguard v1.2.0
   Compiling lock_api v0.4.14
   Compiling sparopt v0.3.2
   Compiling sparesults v0.3.1
   Compiling oxrdfxml v0.2.1
   Compiling oxjsonld v0.2.1
   Compiling oxttl v0.2.1
   Compiling sha2 v0.10.9
   Compiling oxrocksdb-sys v0.5.2
   Compiling sha1 v0.10.6
   Compiling md-5 v0.10.6
   Compiling extendr-api v0.8.1
   Compiling hashbrown v0.14.5
   Compiling hex v0.4.3
   Compiling spareval v0.2.2
   Compiling dashmap v6.1.0
   Compiling oxrdfio v0.2.1
   Compiling extendr-macros v0.8.1
   Compiling siphasher v1.0.2
   Compiling oxigraph v0.5.2
   Compiling roxigraph v0.1.0 (/data/gannet/ripley/R/packages/tests-devel/roxigraph/src/rust)
note: link against the following native artifacts when linking against this static library. The order and any duplication can be significant on some platforms.

note: native-static-libs: -lstdc++ -lR -lgcc_s -lutil -lrt -lpthread -lm -ldl -lc

    Finished `release` profile [optimized] target(s) in 94m 04s
# Always clean up CARGOTMP
rm -Rf /data/gannet/ripley/R/packages/tests-devel/roxigraph/src/.cargo;
gcc -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/lib64 -o roxigraph.so entrypoint.o -L./rust/target/release -lroxigraph
rm -Rf /data/gannet/ripley/R/packages/tests-devel/roxigraph/src/.cargo /data/gannet/ripley/R/packages/tests-devel/roxigraph/src/vendor ./rust/target
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/roxigraph/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/roxigraph/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/roxigraph/src'
installing to /data/gannet/ripley/R/packages/tests-devel/roxigraph.Rcheck/00LOCK-roxigraph/00new/roxigraph/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (roxigraph)