* installing *source* package ‘rminizinc’ ...
** package ‘rminizinc’ successfully unpacked and MD5 sums checked
** using staged installation
checking for gcc... gcc-13
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc-13 accepts -g... yes
checking for gcc-13 option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc-13 -E
checking whether we are using the GNU C++ compiler... yes
checking whether g++-13 -std=gnu++17 accepts -g... yes
checking how to run the C++ preprocessor... g++-13 -std=gnu++17 -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
configure: Custom libminizinc path not provided!
configure: libmzn.a not found at default path!
configure: Path to the solver binaries is not provided!
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating src/config.h
--------------------------------------------------
Configuration for rminizinc 0.0.8
cppflags: -I/usr/local/include
ld flags:
header file folder path:
libmzn path:
project directory: /data/gannet/ripley/R/packages/tests-devel/rminizinc
build platform: MAC_OR_UNIX-LIKE
solver binaries:
--------------------------------------------------
** libs
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
using C++11
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/rminizinc/src'
g++-13 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -DSTRICT_R_HEADERS -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -DSTRICT_R_HEADERS -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c mzn_parse.cpp -o mzn_parse.o
g++-13 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -DSTRICT_R_HEADERS -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c mzn_eval.cpp -o mzn_eval.o
g++-13 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -DSTRICT_R_HEADERS -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c sol_parse.cpp -o sol_parse.o
sol_parse.cpp: In function 'Rcpp::List sol_parse(std::string)':
sol_parse.cpp:66:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
66 | for(int nsol=0; nsol< solutions.size(); nsol++){
| ~~~~^~~~~~~~~~~~~~~~~~
sol_parse.cpp:74:13: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
74 | if(nsol == solutions.size()-1 && optimal_sol_flag){
| ~~~~~^~~~~~~~~~~~~~~~~~~~~
sol_parse.cpp:76:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
76 | }else if(nsol == solutions.size()-1){
| ~~~~~^~~~~~~~~~~~~~~~~~~~~
g++-13 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -DSTRICT_R_HEADERS -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c helper_parse.cpp -o helper_parse.o
g++-13 -std=gnu++11 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o rminizinc.so RcppExports.o mzn_parse.o mzn_eval.o sol_parse.o helper_parse.o
/data/gannet/ripley/R/R-devel/bin/Rscript -e "LIBMINIZINC_PATH <- ''; save(LIBMINIZINC_PATH, file='../data/config.RData')"
/data/gannet/ripley/R/R-devel/bin/Rscript -e "PROJECT_DIRECTORY <- '/data/gannet/ripley/R/packages/tests-devel/rminizinc'; save(PROJECT_DIRECTORY, file='../data/proot.RData')"
/data/gannet/ripley/R/R-devel/bin/Rscript -e "SOLVER_BIN <- ''; save(SOLVER_BIN, file='../data/slvbin.RData')"
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/rminizinc/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/rminizinc/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/rminizinc/src'
installing to /data/gannet/ripley/R/packages/tests-devel/rminizinc.Rcheck/00LOCK-rminizinc/00new/rminizinc/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rminizinc)